RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 IGSF10Q6WRI0 2623 aa11.3□□□□□ -0.6
CBWD3-205ENST00000469687 USP9XQ93008 2570 aaPredicted RBP11.3□□□□□ -0.6
CBWD3-205ENST00000469687 A0A087X0K7 114 aa11.3□□□□□ -0.6
CBWD3-205ENST00000469687 IGHV1-69DA0A0B4J2H0 117 aa11.3□□□□□ -0.6
CBWD3-205ENST00000469687 hDV102S1A0JD36 115 aa11.3□□□□□ -0.6
CBWD3-205ENST00000469687 IGHV1-69P01742 117 aa11.3□□□□□ -0.6
CBWD3-205ENST00000469687 IGHV4-38-2P0DP08 117 aa11.3□□□□□ -0.6
CBWD3-205ENST00000469687 TSPOP30536 169 aa11.3□□□□□ -0.6
CBWD3-205ENST00000469687 FAM104BQ5XKR9 115 aa11.3□□□□□ -0.6
CBWD3-205ENST00000469687 IL17RELQ6ZVW7 336 aa11.3□□□□□ -0.6
CBWD3-205ENST00000469687 PMCHL2Q9BQD1 86 aa11.3□□□□□ -0.6
CBWD3-205ENST00000469687 MSRB1Q9NZV6 116 aa11.3□□□□□ -0.6
CBWD3-205ENST00000469687 MOB4Q9Y3A3 225 aa11.3□□□□□ -0.6
CBWD3-205ENST00000469687 SMKR1H3BMG3 65 aa11.29□□□□□ -0.6
CBWD3-205ENST00000469687 ORM1P02763 201 aa11.29□□□□□ -0.6
CBWD3-205ENST00000469687 ZNF25P17030 456 aaPredicted RBP11.29□□□□□ -0.6
CBWD3-205ENST00000469687 STPG4Q8N801 248 aa11.29□□□□□ -0.6
CBWD3-205ENST00000469687 FER1L6-AS1Q8NA97 138 aa11.29□□□□□ -0.6
CBWD3-205ENST00000469687 TRAV8-2A0A0B4J237 113 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 TRAV41A0A0B4J266 112 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 IGLC6P0CF74 106 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 TWIST1Q15672 202 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 LY6EQ16553 131 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 MRPL51Q4U2R6 128 aaKnown RBP11.28□□□□□ -0.6
CBWD3-205ENST00000469687 C19orf54Q5BKX5 351 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 PRSS3P2Q8NHM4 247 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 CCL19Q99731 98 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 CACNA1AO00555 2505 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 A0A096LNJ9 63 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 TRBV7-1A0A0A6YYK4 115 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 TRBV12-3P01733 135 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 OR5AL1P0C617 328 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 PPIFP30405 207 aaKnown RBP11.28□□□□□ -0.6
CBWD3-205ENST00000469687 FXYD7P58549 80 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 ATP5G2Q06055 141 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 PIMREGQ9BSJ6 248 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 MAP1LC3CQ9BXW4 147 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 LAMTOR2Q9Y2Q5 125 aa11.28□□□□□ -0.6
CBWD3-205ENST00000469687 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.28□□□□□ -0.6
CBWD3-205ENST00000469687 NCR2O95944 276 aa11.27□□□□□ -0.6
CBWD3-205ENST00000469687 BMI1P35226 326 aa11.27□□□□□ -0.6
CBWD3-205ENST00000469687 FA2HQ7L5A8 372 aa11.27□□□□□ -0.6
CBWD3-205ENST00000469687 C10orf105Q8TEF2 133 aa11.27□□□□□ -0.6
CBWD3-205ENST00000469687 PRELID3AQ96N28 172 aa11.27□□□□□ -0.6
CBWD3-205ENST00000469687 METTL26Q96S19 204 aa11.27□□□□□ -0.6
CBWD3-205ENST00000469687 SIGLEC8Q9NYZ4 499 aa11.27□□□□□ -0.6
CBWD3-205ENST00000469687 U3KQK5 164 aa11.27□□□□□ -0.6
CBWD3-205ENST00000469687 IGHV4-30-2A0A087WSY4 118 aa11.27□□□□□ -0.61
CBWD3-205ENST00000469687 FBLL1A6NHQ2 334 aaKnown RBP11.27□□□□□ -0.61
CBWD3-205ENST00000469687 S100A7P31151 101 aa11.27□□□□□ -0.61
CBWD3-205ENST00000469687 RAB9AP51151 201 aa11.27□□□□□ -0.61
CBWD3-205ENST00000469687 Q6ZQT7 251 aa11.27□□□□□ -0.61
CBWD3-205ENST00000469687 C8orf86Q6ZUL3 223 aa11.27□□□□□ -0.61
CBWD3-205ENST00000469687 AGPAT4-IT1Q9H0P7 198 aa11.27□□□□□ -0.61
CBWD3-205ENST00000469687 TRGV3P03979 118 aa11.26□□□□□ -0.61
CBWD3-205ENST00000469687 HINT1P49773 126 aaPredicted RBP11.26□□□□□ -0.61
CBWD3-205ENST00000469687 ORMDL3Q8N138 153 aa11.26□□□□□ -0.61
CBWD3-205ENST00000469687 HSPB8Q9UJY1 196 aa11.26□□□□□ -0.61
CBWD3-205ENST00000469687 CSPG4Q6UVK1 2322 aa11.26□□□□□ -0.61
CBWD3-205ENST00000469687 FABP5P3A8MUU1 101 aa11.26□□□□□ -0.61
CBWD3-205ENST00000469687 GAS8-AS1O95177 125 aa11.26□□□□□ -0.61
CBWD3-205ENST00000469687 UNQ9165/PRO28630Q6UXU0 137 aa11.26□□□□□ -0.61
CBWD3-205ENST00000469687 SLC50A1Q9BRV3 221 aa11.26□□□□□ -0.61
CBWD3-205ENST00000469687 TMEM208Q9BTX3 173 aa11.26□□□□□ -0.61
CBWD3-205ENST00000469687 ZNF747Q9BV97 191 aa11.26□□□□□ -0.61
CBWD3-205ENST00000469687 C11orf21Q9P2W6 132 aa11.26□□□□□ -0.61
CBWD3-205ENST00000469687 DOPEY1Q5JWR5 2465 aa11.25□□□□□ -0.61
CBWD3-205ENST00000469687 C20orf202A1L168 122 aa11.25□□□□□ -0.61
CBWD3-205ENST00000469687 NPYP01303 97 aa11.25□□□□□ -0.61
CBWD3-205ENST00000469687 Q6ZS46 218 aa11.25□□□□□ -0.61
CBWD3-205ENST00000469687 U3KQE9 123 aa11.25□□□□□ -0.61
CBWD3-205ENST00000469687 IGKV3D-20A0A0C4DH25 116 aa11.24□□□□□ -0.61
CBWD3-205ENST00000469687 ATP5J2P56134 94 aa11.24□□□□□ -0.61
CBWD3-205ENST00000469687 RPS20P60866 119 aaKnown RBP11.24□□□□□ -0.61
CBWD3-205ENST00000469687 COL5A1-AS1Q5SY13 56 aa11.24□□□□□ -0.61
CBWD3-205ENST00000469687 PET117Q6UWS5 81 aa11.24□□□□□ -0.61
CBWD3-205ENST00000469687 OR10AG1Q8NH19 301 aa11.24□□□□□ -0.61
CBWD3-205ENST00000469687 TMEM191AQ9H0A3 160 aa11.24□□□□□ -0.61
CBWD3-205ENST00000469687 SMAD7O15105 426 aaKnown RBP11.24□□□□□ -0.61
CBWD3-205ENST00000469687 CKS2P33552 79 aa11.24□□□□□ -0.61
CBWD3-205ENST00000469687 DMRTA1Q5VZB9 504 aa11.24□□□□□ -0.61
CBWD3-205ENST00000469687 LCNL1Q6ZST4 164 aa11.24□□□□□ -0.61
CBWD3-205ENST00000469687 NRGNQ92686 78 aa11.24□□□□□ -0.61
CBWD3-205ENST00000469687 RNF185Q96GF1 192 aa11.24□□□□□ -0.61
CBWD3-205ENST00000469687 MEGF9Q9H1U4 602 aa11.24□□□□□ -0.61
CBWD3-205ENST00000469687 MRPS16Q9Y3D3 137 aaKnown RBP11.24□□□□□ -0.61
CBWD3-205ENST00000469687 RBAKDNA6NC62 111 aa11.23□□□□□ -0.61
CBWD3-205ENST00000469687 H3BUX3 64 aa11.23□□□□□ -0.61
CBWD3-205ENST00000469687 ARL3P36405 182 aa11.23□□□□□ -0.61
CBWD3-205ENST00000469687 LINC01559Q495D7 138 aa11.23□□□□□ -0.61
CBWD3-205ENST00000469687 LINC01545Q5VT33 79 aa11.23□□□□□ -0.61
CBWD3-205ENST00000469687 PRSS57Q6UWY2 283 aa11.23□□□□□ -0.61
CBWD3-205ENST00000469687 Q6ZVH6 145 aa11.23□□□□□ -0.61
CBWD3-205ENST00000469687 FAM223BA6NKX1 122 aa11.23□□□□□ -0.61
CBWD3-205ENST00000469687 IGHV3-11P01762 117 aa11.23□□□□□ -0.61
CBWD3-205ENST00000469687 CRIP2P52943 208 aaPredicted RBP11.23□□□□□ -0.61
CBWD3-205ENST00000469687 BLCAPP62952 87 aa11.23□□□□□ -0.61
CBWD3-205ENST00000469687 CLEC2AQ6UVW9 174 aa11.23□□□□□ -0.61
CBWD3-205ENST00000469687 FAM223AQ8IWN6 122 aa11.23□□□□□ -0.61
CBWD3-205ENST00000469687 OR8A1Q8NGG7 326 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms