RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 THYN1Q9P016 225 aa12.31□□□□□ -0.44
TSPAN4-211ENST00000468468 PIEZO1Q92508 2521 aa12.31□□□□□ -0.44
TSPAN4-211ENST00000468468 A0A096LNJ9 63 aa12.3□□□□□ -0.44
TSPAN4-211ENST00000468468 SAMD13Q5VXD3 122 aa12.3□□□□□ -0.44
TSPAN4-211ENST00000468468 PRR25Q96S07 402 aa12.3□□□□□ -0.44
TSPAN4-211ENST00000468468 U3KQK5 164 aa12.3□□□□□ -0.44
TSPAN4-211ENST00000468468 IGFL4Q6B9Z1 124 aa12.3□□□□□ -0.44
TSPAN4-211ENST00000468468 ORMDL3Q8N138 153 aa12.3□□□□□ -0.44
TSPAN4-211ENST00000468468 EGR2P11161 476 aaPredicted RBP12.3□□□□□ -0.44
TSPAN4-211ENST00000468468 HIST1H1AQ02539 215 aaPredicted RBP12.3□□□□□ -0.44
TSPAN4-211ENST00000468468 Q8TAT8 98 aa12.3□□□□□ -0.44
TSPAN4-211ENST00000468468 COX8AP10176 69 aa12.29□□□□□ -0.44
TSPAN4-211ENST00000468468 MRPL51Q4U2R6 128 aaKnown RBP12.29□□□□□ -0.44
TSPAN4-211ENST00000468468 CCDC144NLQ6NUI1 221 aa12.29□□□□□ -0.44
TSPAN4-211ENST00000468468 PRSS57Q6UWY2 283 aa12.29□□□□□ -0.44
TSPAN4-211ENST00000468468 VMO1Q7Z5L0 202 aa12.29□□□□□ -0.44
TSPAN4-211ENST00000468468 RABAC1Q9UI14 185 aa12.29□□□□□ -0.44
TSPAN4-211ENST00000468468 SNAI2O43623 268 aa12.29□□□□□ -0.44
TSPAN4-211ENST00000468468 NDUFS7O75251 213 aa12.29□□□□□ -0.44
TSPAN4-211ENST00000468468 CTSGP08311 255 aa12.29□□□□□ -0.44
TSPAN4-211ENST00000468468 VGLL1Q99990 258 aa12.29□□□□□ -0.44
TSPAN4-211ENST00000468468 SMAD5-AS1Q9Y6J3 95 aa12.29□□□□□ -0.44
TSPAN4-211ENST00000468468 ASH1LQ9NR48 2969 aaKnown RBP12.28□□□□□ -0.44
TSPAN4-211ENST00000468468 IGHV3OR16-8A0A075B7F1 116 aa12.28□□□□□ -0.44
TSPAN4-211ENST00000468468 GAGE10A6NGK3 116 aa12.28□□□□□ -0.44
TSPAN4-211ENST00000468468 GNLYP22749 145 aa12.28□□□□□ -0.44
TSPAN4-211ENST00000468468 HLA-DMBP28068 263 aa12.28□□□□□ -0.44
TSPAN4-211ENST00000468468 GPR183P32249 361 aa12.28□□□□□ -0.44
TSPAN4-211ENST00000468468 ZNF80P51504 273 aaPredicted RBP12.28□□□□□ -0.44
TSPAN4-211ENST00000468468 FXYD7P58549 80 aa12.28□□□□□ -0.44
TSPAN4-211ENST00000468468 COX8CQ7Z4L0 72 aa12.28□□□□□ -0.44
TSPAN4-211ENST00000468468 PKD1L2Q7Z442 2459 aa12.28□□□□□ -0.44
TSPAN4-211ENST00000468468 TWIST1Q15672 202 aa12.28□□□□□ -0.44
TSPAN4-211ENST00000468468 IGHV3-35A0A0C4DH35 117 aa12.27□□□□□ -0.44
TSPAN4-211ENST00000468468 Q8N6K4 173 aa12.27□□□□□ -0.44
TSPAN4-211ENST00000468468 SMKR1H3BMG3 65 aa12.27□□□□□ -0.45
TSPAN4-211ENST00000468468 SCGB2A1O75556 95 aa12.27□□□□□ -0.45
TSPAN4-211ENST00000468468 JMJD8Q96S16 334 aa12.27□□□□□ -0.45
TSPAN4-211ENST00000468468 C7orf71A4D174 169 aa12.26□□□□□ -0.45
TSPAN4-211ENST00000468468 NDUFS8O00217 210 aa12.26□□□□□ -0.45
TSPAN4-211ENST00000468468 CKS2P33552 79 aa12.26□□□□□ -0.45
TSPAN4-211ENST00000468468 C2orf91Q6ZV80 131 aa12.26□□□□□ -0.45
TSPAN4-211ENST00000468468 ITLN2Q8WWU7 325 aaPredicted RBP12.26□□□□□ -0.45
TSPAN4-211ENST00000468468 PEF1Q9UBV8 284 aaKnown RBP12.26□□□□□ -0.45
TSPAN4-211ENST00000468468 C19orf84I3L1E1 186 aa12.26□□□□□ -0.45
TSPAN4-211ENST00000468468 IGHG4P01861 327 aa12.26□□□□□ -0.45
TSPAN4-211ENST00000468468 DTX2Q86UW9 622 aa12.26□□□□□ -0.45
TSPAN4-211ENST00000468468 PIP4P2Q8N4L2 257 aa12.26□□□□□ -0.45
TSPAN4-211ENST00000468468 GTSF1LQ9H1H1 148 aa12.26□□□□□ -0.45
TSPAN4-211ENST00000468468 IGHV7-81A0A0B4J1V7 117 aa12.25□□□□□ -0.45
TSPAN4-211ENST00000468468 FBLL1A6NHQ2 334 aaKnown RBP12.25□□□□□ -0.45
TSPAN4-211ENST00000468468 CD5LO43866 347 aa12.25□□□□□ -0.45
TSPAN4-211ENST00000468468 UBTD1Q9HAC8 227 aa12.25□□□□□ -0.45
TSPAN4-211ENST00000468468 NPYP01303 97 aa12.25□□□□□ -0.45
TSPAN4-211ENST00000468468 EBI3Q14213 229 aa12.25□□□□□ -0.45
TSPAN4-211ENST00000468468 OOSP1A8MZH6 123 aa12.24□□□□□ -0.45
TSPAN4-211ENST00000468468 HBDP02042 147 aa12.24□□□□□ -0.45
TSPAN4-211ENST00000468468 ORM1P02763 201 aa12.24□□□□□ -0.45
TSPAN4-211ENST00000468468 IGLC6P0CF74 106 aa12.24□□□□□ -0.45
TSPAN4-211ENST00000468468 CACNG7P62955 275 aa12.24□□□□□ -0.45
TSPAN4-211ENST00000468468 SMAGPQ0VAQ4 97 aa12.24□□□□□ -0.45
TSPAN4-211ENST00000468468 UFSP1Q6NVU6 142 aa12.24□□□□□ -0.45
TSPAN4-211ENST00000468468 CFAP161Q6P656 301 aa12.24□□□□□ -0.45
TSPAN4-211ENST00000468468 TCTAP57738 103 aa12.24□□□□□ -0.45
TSPAN4-211ENST00000468468 LGALS9BQ3B8N2 356 aa12.24□□□□□ -0.45
TSPAN4-211ENST00000468468 LGALS9CQ6DKI2 356 aa12.24□□□□□ -0.45
TSPAN4-211ENST00000468468 C1orf122Q6ZSJ8 110 aa12.24□□□□□ -0.45
TSPAN4-211ENST00000468468 MINOS1Q5TGZ0 78 aa12.24□□□□□ -0.45
TSPAN4-211ENST00000468468 MINOS1-NBL1R4GNA1 71 aa12.24□□□□□ -0.45
TSPAN4-211ENST00000468468 CACNA1AO00555 2505 aa12.23□□□□□ -0.45
TSPAN4-211ENST00000468468 AZU1P20160 251 aa12.23□□□□□ -0.45
TSPAN4-211ENST00000468468 ZFP36P26651 326 aaKnown RBP12.23□□□□□ -0.45
TSPAN4-211ENST00000468468 PAX8Q06710 450 aa12.23□□□□□ -0.45
TSPAN4-211ENST00000468468 ERCC8Q13216 396 aa12.23□□□□□ -0.45
TSPAN4-211ENST00000468468 ZNF575Q86XF7 245 aa12.23□□□□□ -0.45
TSPAN4-211ENST00000468468 MSRB1Q9NZV6 116 aa12.23□□□□□ -0.45
TSPAN4-211ENST00000468468 AKAP6Q13023 2319 aa12.23□□□□□ -0.45
TSPAN4-211ENST00000468468 Q8N9W7 124 aa12.23□□□□□ -0.45
TSPAN4-211ENST00000468468 DPF1Q92782 380 aa12.23□□□□□ -0.45
TSPAN4-211ENST00000468468 FGF6P10767 208 aa12.22□□□□□ -0.45
TSPAN4-211ENST00000468468 TMEM97Q5BJF2 176 aa12.22□□□□□ -0.45
TSPAN4-211ENST00000468468 IFI27L1Q96BM0 104 aa12.22□□□□□ -0.45
TSPAN4-211ENST00000468468 MED13LQ71F56 2210 aa12.22□□□□□ -0.45
TSPAN4-211ENST00000468468 FABP5P3A8MUU1 101 aa12.22□□□□□ -0.45
TSPAN4-211ENST00000468468 PRAC2D3DTV9 90 aa12.21□□□□□ -0.45
TSPAN4-211ENST00000468468 ECSCRQ19T08 205 aa12.21□□□□□ -0.45
TSPAN4-211ENST00000468468 C15orf32Q32M92 178 aa12.21□□□□□ -0.45
TSPAN4-211ENST00000468468 COL12A1Q99715 3063 aa12.21□□□□□ -0.45
TSPAN4-211ENST00000468468 H3BUT2 72 aa12.21□□□□□ -0.46
TSPAN4-211ENST00000468468 ZNF207O43670 478 aaKnown RBP12.21□□□□□ -0.46
TSPAN4-211ENST00000468468 SRSF2Q01130 221 aaKnown RBP12.2□□□□□ -0.46
TSPAN4-211ENST00000468468 WFDC3Q8IUB2 231 aa12.2□□□□□ -0.46
TSPAN4-211ENST00000468468 ZNF502Q8TBZ5 544 aa12.2□□□□□ -0.46
TSPAN4-211ENST00000468468 RNF185Q96GF1 192 aa12.2□□□□□ -0.46
TSPAN4-211ENST00000468468 CACNA1BQ00975 2339 aa12.2□□□□□ -0.46
TSPAN4-211ENST00000468468 A6NJY4 79 aa12.2□□□□□ -0.46
TSPAN4-211ENST00000468468 CLEC3BP05452 202 aa12.2□□□□□ -0.46
TSPAN4-211ENST00000468468 RNF182Q8N6D2 247 aa12.2□□□□□ -0.46
TSPAN4-211ENST00000468468 FAM110DQ8TAY7 271 aaPredicted RBP12.2□□□□□ -0.46
TSPAN4-211ENST00000468468 IGHV3-66A0A0C4DH42 116 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms