RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 KIAA1549LQ6ZVL6 1849 aa0.45□□□□□ -2.34
ATG3-204ENST00000467275 A6NN06 94 aa0.45□□□□□ -2.34
ATG3-204ENST00000467275 PDE6GP18545 87 aa0.45□□□□□ -2.34
ATG3-204ENST00000467275 OCIAD2Q56VL3 154 aa0.45□□□□□ -2.34
ATG3-204ENST00000467275 LINC00299Q6ZSB3 139 aa0.45□□□□□ -2.34
ATG3-204ENST00000467275 ANGPTL5Q86XS5 388 aa0.45□□□□□ -2.34
ATG3-204ENST00000467275 C10orf95Q9H7T3 257 aa0.45□□□□□ -2.34
ATG3-204ENST00000467275 ANK1P16157 1881 aa0.45□□□□□ -2.34
ATG3-204ENST00000467275 TRPM7Q96QT4 1865 aa0.45□□□□□ -2.34
ATG3-204ENST00000467275 MYH1P12882 1939 aa0.44□□□□□ -2.34
ATG3-204ENST00000467275 TRBV27A0A0K0K1C4 114 aa0.44□□□□□ -2.34
ATG3-204ENST00000467275 PFDN1O60925 122 aa0.44□□□□□ -2.34
ATG3-204ENST00000467275 SDC2P34741 201 aa0.44□□□□□ -2.34
ATG3-204ENST00000467275 NDUFA6P56556 154 aa0.44□□□□□ -2.34
ATG3-204ENST00000467275 SPINK9Q5DT21 86 aa0.44□□□□□ -2.34
ATG3-204ENST00000467275 ATOH7Q8N100 152 aa0.44□□□□□ -2.34
ATG3-204ENST00000467275 OR5H6Q8NGV6 325 aa0.44□□□□□ -2.34
ATG3-204ENST00000467275 RMND5BQ96G75 393 aaPredicted RBP0.44□□□□□ -2.34
ATG3-204ENST00000467275 LIMD2Q9BT23 127 aa0.44□□□□□ -2.34
ATG3-204ENST00000467275 NIT2Q9NQR4 276 aa0.44□□□□□ -2.34
ATG3-204ENST00000467275 BOKQ9UMX3 212 aaPredicted RBP0.44□□□□□ -2.34
ATG3-204ENST00000467275 V9GYQ6 96 aa0.44□□□□□ -2.34
ATG3-204ENST00000467275 ATG2AQ2TAZ0 1938 aa0.44□□□□□ -2.34
ATG3-204ENST00000467275 ZNF462Q96JM2 2506 aa0.43□□□□□ -2.34
ATG3-204ENST00000467275 PBRM1Q86U86 1689 aa0.43□□□□□ -2.34
ATG3-204ENST00000467275 TRBV30A0A0K0K1B3 111 aa0.43□□□□□ -2.34
ATG3-204ENST00000467275 E7EQ34 232 aa0.43□□□□□ -2.34
ATG3-204ENST00000467275 IGHV3-30P01768 117 aa0.43□□□□□ -2.34
ATG3-204ENST00000467275 TRACP01848 142 aa0.43□□□□□ -2.34
ATG3-204ENST00000467275 IGHV3-30-5P0DP03 117 aa0.43□□□□□ -2.34
ATG3-204ENST00000467275 HRCT1Q6UXD1 115 aa0.43□□□□□ -2.34
ATG3-204ENST00000467275 LINC00305Q7Z4B0 112 aa0.43□□□□□ -2.34
ATG3-204ENST00000467275 THEM6Q8WUY1 208 aa0.43□□□□□ -2.34
ATG3-204ENST00000467275 PRELID3AQ96N28 172 aa0.43□□□□□ -2.34
ATG3-204ENST00000467275 MED31Q9Y3C7 131 aa0.43□□□□□ -2.34
ATG3-204ENST00000467275 NAV2Q8IVL1 2488 aa0.43□□□□□ -2.34
ATG3-204ENST00000467275 USP54Q70EL1 1684 aa0.43□□□□□ -2.34
ATG3-204ENST00000467275 A0A0D9SG42 100 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 TRBV7-6A0A0J9YX20 115 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 A0A1B0GV72 72 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 ZNF727A8MUV8 499 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 C5orf58C9J3I9 102 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 H3BMG7 143 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 TPT1P13693 172 aaKnown RBP0.42□□□□□ -2.34
ATG3-204ENST00000467275 POLR2HP52434 150 aaKnown RBP0.42□□□□□ -2.34
ATG3-204ENST00000467275 MAXP61244 160 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 TFAMQ00059 246 aaKnown RBP0.42□□□□□ -2.34
ATG3-204ENST00000467275 SPATA8Q6RVD6 105 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 IZUMO2Q6UXV1 221 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 CASC2Q6XLA1 102 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 GRPEL2Q8TAA5 225 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 CLEC2BQ92478 149 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 NABP2Q9BQ15 211 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 LXNQ9BS40 222 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 KNTC1P50748 2209 aa0.42□□□□□ -2.34
ATG3-204ENST00000467275 TCOF1Q13428 1488 aaKnown RBP0.41□□□□□ -2.34
ATG3-204ENST00000467275 XIRP1Q702N8 1843 aaKnown RBP0.41□□□□□ -2.34
ATG3-204ENST00000467275 CTTNBP2Q8WZ74 1663 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 TRAV13-1A0A0B4J241 112 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 PGRMC1O00264 195 aaKnown RBP0.41□□□□□ -2.34
ATG3-204ENST00000467275 FAM107AO95990 144 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 IFNA21P01568 189 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 SAA1P0DJI8 122 aaPredicted RBP0.41□□□□□ -2.34
ATG3-204ENST00000467275 NEFHP12036 1026 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 RPL7P18124 248 aaKnown RBP0.41□□□□□ -2.34
ATG3-204ENST00000467275 NEDD8Q15843 81 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 TOMM20LQ6UXN7 152 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 Q6ZQY7 126 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 C10orf111Q8N326 155 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 C5orf17Q8NAS9 161 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 MORN4Q8NDC4 146 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 OR5AK2Q8NH90 309 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 CIB3Q96Q77 187 aaPredicted RBP0.41□□□□□ -2.34
ATG3-204ENST00000467275 DDA1Q9BW61 102 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 CBLN4Q9NTU7 201 aa0.41□□□□□ -2.34
ATG3-204ENST00000467275 DLC1Q96QB1 1528 aa0.4□□□□□ -2.35
ATG3-204ENST00000467275 C3orf85A0A1B0GTC6 90 aa0.4□□□□□ -2.35
ATG3-204ENST00000467275 NUPR2A6NF83 97 aa0.4□□□□□ -2.35
ATG3-204ENST00000467275 RPL37AP61513 92 aaKnown RBP0.4□□□□□ -2.35
ATG3-204ENST00000467275 TMEM128Q5BJH2 165 aa0.4□□□□□ -2.35
ATG3-204ENST00000467275 TEX29Q8N6K0 151 aa0.4□□□□□ -2.35
ATG3-204ENST00000467275 TMEM229BQ8NBD8 167 aa0.4□□□□□ -2.35
ATG3-204ENST00000467275 OR9Q1Q8NGQ5 310 aa0.4□□□□□ -2.35
ATG3-204ENST00000467275 PLAC4Q8WY50 150 aa0.4□□□□□ -2.35
ATG3-204ENST00000467275 CCL19Q99731 98 aa0.4□□□□□ -2.35
ATG3-204ENST00000467275 LPAR5Q9H1C0 372 aa0.4□□□□□ -2.35
ATG3-204ENST00000467275 FKBP11Q9NYL4 201 aa0.4□□□□□ -2.35
ATG3-204ENST00000467275 MPC1Q9Y5U8 109 aa0.4□□□□□ -2.35
ATG3-204ENST00000467275 FAM135BQ49AJ0 1406 aa0.39□□□□□ -2.35
ATG3-204ENST00000467275 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.39□□□□□ -2.35
ATG3-204ENST00000467275 LOC107984640A0A0U1RRK4 108 aa0.39□□□□□ -2.35
ATG3-204ENST00000467275 CCL4P13236 92 aa0.39□□□□□ -2.35
ATG3-204ENST00000467275 CRYGSP22914 178 aa0.39□□□□□ -2.35
ATG3-204ENST00000467275 RPS3P23396 243 aaKnown RBP eCLIP0.39□□□□□ -2.35
ATG3-204ENST00000467275 SRP9P49458 86 aaKnown RBP0.39□□□□□ -2.35
ATG3-204ENST00000467275 CCSMST1Q4G0I0 132 aa0.39□□□□□ -2.35
ATG3-204ENST00000467275 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.39□□□□□ -2.35
ATG3-204ENST00000467275 NAT14Q8WUY8 206 aa0.39□□□□□ -2.35
ATG3-204ENST00000467275 CCDC115Q96NT0 180 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms