RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 RPL35P42766 123 aaKnown RBP-0.48□□□□□ -2.49
SMC4-207ENST00000467263 TRPM7Q96QT4 1865 aa-0.48□□□□□ -2.49
SMC4-207ENST00000467263 CAMSAP2Q08AD1 1489 aa-0.48□□□□□ -2.49
SMC4-207ENST00000467263 SNRPD3P62318 126 aaKnown RBP-0.49□□□□□ -2.49
SMC4-207ENST00000467263 POU6F1Q14863 301 aa-0.49□□□□□ -2.49
SMC4-207ENST00000467263 HACD4Q5VWC8 232 aa-0.49□□□□□ -2.49
SMC4-207ENST00000467263 CSAG1Q6PB30 78 aa-0.49□□□□□ -2.49
SMC4-207ENST00000467263 PHF5AQ7RTV0 110 aaKnown RBP-0.49□□□□□ -2.49
SMC4-207ENST00000467263 AP1S3Q96PC3 154 aa-0.49□□□□□ -2.49
SMC4-207ENST00000467263 PBDC1Q9BVG4 233 aa-0.49□□□□□ -2.49
SMC4-207ENST00000467263 LYRM2Q9NU23 88 aaPredicted RBP-0.49□□□□□ -2.49
SMC4-207ENST00000467263 SS18L2Q9UHA2 77 aa-0.49□□□□□ -2.49
SMC4-207ENST00000467263 ANKRD17O75179 2603 aaKnown RBP-0.49□□□□□ -2.49
SMC4-207ENST00000467263 NSD1Q96L73 2696 aaPredicted RBP-0.49□□□□□ -2.49
SMC4-207ENST00000467263 FLNCQ14315 2725 aa-0.49□□□□□ -2.49
SMC4-207ENST00000467263 CAMSAP1Q5T5Y3 1602 aa-0.49□□□□□ -2.49
SMC4-207ENST00000467263 PIK3C2AO00443 1686 aa-0.49□□□□□ -2.49
SMC4-207ENST00000467263 ATG12O94817 140 aa-0.5□□□□□ -2.49
SMC4-207ENST00000467263 FXYD3Q14802 87 aa-0.5□□□□□ -2.49
SMC4-207ENST00000467263 FKBP1CQ5VVH2 108 aa-0.5□□□□□ -2.49
SMC4-207ENST00000467263 ANK1P16157 1881 aa-0.5□□□□□ -2.49
SMC4-207ENST00000467263 DSTQ03001 7570 aaKnown RBP-0.51□□□□□ -2.49
SMC4-207ENST00000467263 C3orf85A0A1B0GTC6 90 aa-0.51□□□□□ -2.49
SMC4-207ENST00000467263 GYPBP06028 91 aa-0.51□□□□□ -2.49
SMC4-207ENST00000467263 FABP4P15090 132 aa-0.51□□□□□ -2.49
SMC4-207ENST00000467263 PPP1R2P41236 205 aa-0.51□□□□□ -2.49
SMC4-207ENST00000467263 RTL9Q8NET4 1388 aa-0.51□□□□□ -2.49
SMC4-207ENST00000467263 OR2H1Q9GZK4 316 aa-0.51□□□□□ -2.49
SMC4-207ENST00000467263 SH3BGRL3Q9H299 93 aa-0.51□□□□□ -2.49
SMC4-207ENST00000467263 MYH2Q9UKX2 1941 aa-0.51□□□□□ -2.49
SMC4-207ENST00000467263 FXYD1O00168 92 aa-0.52□□□□□ -2.49
SMC4-207ENST00000467263 FADDQ13158 208 aa-0.52□□□□□ -2.49
SMC4-207ENST00000467263 NEK7Q8TDX7 302 aa-0.52□□□□□ -2.49
SMC4-207ENST00000467263 CEP19Q96LK0 163 aa-0.52□□□□□ -2.49
SMC4-207ENST00000467263 TAF9BQ9HBM6 251 aa-0.52□□□□□ -2.49
SMC4-207ENST00000467263 NINQ8N4C6 2090 aa-0.52□□□□□ -2.49
SMC4-207ENST00000467263 KIAA1549LQ6ZVL6 1849 aa-0.52□□□□□ -2.49
SMC4-207ENST00000467263 ESPL1Q14674 2120 aa-0.53□□□□□ -2.49
SMC4-207ENST00000467263 NBDYA0A0U1RRE5 68 aa-0.53□□□□□ -2.49
SMC4-207ENST00000467263 LOC101927531A0A1B0GV80 90 aa-0.53□□□□□ -2.49
SMC4-207ENST00000467263 HSD11B1P28845 292 aa-0.53□□□□□ -2.49
SMC4-207ENST00000467263 MRPS36P82909 103 aaKnown RBP-0.53□□□□□ -2.49
SMC4-207ENST00000467263 RTL8BQ17RB0 113 aa-0.53□□□□□ -2.49
SMC4-207ENST00000467263 VMO1Q7Z5L0 202 aa-0.53□□□□□ -2.49
SMC4-207ENST00000467263 C5orf56Q8N8D9 126 aa-0.53□□□□□ -2.49
SMC4-207ENST00000467263 RTL8AQ9BWD3 113 aa-0.53□□□□□ -2.49
SMC4-207ENST00000467263 ABCA1O95477 2261 aa-0.53□□□□□ -2.49
SMC4-207ENST00000467263 KIAA1107Q9UPP5 1409 aa-0.54□□□□□ -2.5
SMC4-207ENST00000467263 WNK2Q9Y3S1 2297 aa-0.54□□□□□ -2.5
SMC4-207ENST00000467263 CSN2P05814 226 aa-0.54□□□□□ -2.5
SMC4-207ENST00000467263 CAPZBP47756 277 aa-0.54□□□□□ -2.5
SMC4-207ENST00000467263 DHRS4L2Q6PKH6 230 aa-0.54□□□□□ -2.5
SMC4-207ENST00000467263 OR5AK2Q8NH90 309 aa-0.54□□□□□ -2.5
SMC4-207ENST00000467263 CCL4L1Q8NHW4 92 aa-0.54□□□□□ -2.5
SMC4-207ENST00000467263 AFDNP55196 1824 aaKnown RBP-0.54□□□□□ -2.5
SMC4-207ENST00000467263 C5orf58C9J3I9 102 aa-0.55□□□□□ -2.5
SMC4-207ENST00000467263 TRACP01848 142 aa-0.55□□□□□ -2.5
SMC4-207ENST00000467263 TMED2Q15363 201 aa-0.55□□□□□ -2.5
SMC4-207ENST00000467263 CROCCP2Q86T23 111 aa-0.55□□□□□ -2.5
SMC4-207ENST00000467263 NUP35Q8NFH5 326 aa-0.55□□□□□ -2.5
SMC4-207ENST00000467263 CIB3Q96Q77 187 aaPredicted RBP-0.55□□□□□ -2.5
SMC4-207ENST00000467263 MRPL35Q9NZE8 188 aaKnown RBP-0.55□□□□□ -2.5
SMC4-207ENST00000467263 AHCTF1Q8WYP5 2266 aa-0.55□□□□□ -2.5
SMC4-207ENST00000467263 A0A1W2PPB8 328 aa-0.56□□□□□ -2.5
SMC4-207ENST00000467263 BBIP1A8MTZ0 92 aa-0.56□□□□□ -2.5
SMC4-207ENST00000467263 KIR3DP1A8MWS1 328 aa-0.56□□□□□ -2.5
SMC4-207ENST00000467263 KPNA4O00629 521 aaPredicted RBP-0.56□□□□□ -2.5
SMC4-207ENST00000467263 MRPS25P82663 173 aaKnown RBP-0.56□□□□□ -2.5
SMC4-207ENST00000467263 IZUMO2Q6UXV1 221 aa-0.56□□□□□ -2.5
SMC4-207ENST00000467263 C3orf62Q6ZUJ4 267 aa-0.56□□□□□ -2.5
SMC4-207ENST00000467263 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.56□□□□□ -2.5
SMC4-207ENST00000467263 CLEC2BQ92478 149 aa-0.56□□□□□ -2.5
SMC4-207ENST00000467263 DIRC1Q969H9 104 aa-0.56□□□□□ -2.5
SMC4-207ENST00000467263 CARD19Q96LW7 228 aa-0.56□□□□□ -2.5
SMC4-207ENST00000467263 MCEEQ96PE7 176 aa-0.56□□□□□ -2.5
SMC4-207ENST00000467263 GINS3Q9BRX5 216 aa-0.56□□□□□ -2.5
SMC4-207ENST00000467263 OTORQ9NRC9 128 aa-0.56□□□□□ -2.5
SMC4-207ENST00000467263 TANC2Q9HCD6 1990 aa-0.56□□□□□ -2.5
SMC4-207ENST00000467263 CHD9Q3L8U1 2897 aa-0.56□□□□□ -2.5
SMC4-207ENST00000467263 LOC107984156A0A0G2JMH3 177 aa-0.57□□□□□ -2.5
SMC4-207ENST00000467263 MFSD11O43934 449 aa-0.57□□□□□ -2.5
SMC4-207ENST00000467263 NDUFA6P56556 154 aa-0.57□□□□□ -2.5
SMC4-207ENST00000467263 DEFB132Q7Z7B7 95 aa-0.57□□□□□ -2.5
SMC4-207ENST00000467263 ARL17AQ8IVW1 177 aa-0.57□□□□□ -2.5
SMC4-207ENST00000467263 TCTEX1D1Q8N7M0 179 aa-0.57□□□□□ -2.5
SMC4-207ENST00000467263 OR4B1Q8NGF8 309 aa-0.57□□□□□ -2.5
SMC4-207ENST00000467263 OR13C6PQ8NH95 151 aa-0.57□□□□□ -2.5
SMC4-207ENST00000467263 BORCS8Q96FH0 119 aa-0.57□□□□□ -2.5
SMC4-207ENST00000467263 MRPL36Q9P0J6 103 aaKnown RBP-0.57□□□□□ -2.5
SMC4-207ENST00000467263 TANC1Q9C0D5 1861 aa-0.57□□□□□ -2.5
SMC4-207ENST00000467263 MYO7AQ13402 2215 aa-0.57□□□□□ -2.5
SMC4-207ENST00000467263 ABCA2Q9BZC7 2435 aa-0.57□□□□□ -2.5
SMC4-207ENST00000467263 H3BQV1 296 aa-0.58□□□□□ -2.5
SMC4-207ENST00000467263 IFNA1P01562 189 aa-0.58□□□□□ -2.5
SMC4-207ENST00000467263 ARF6P62330 175 aa-0.58□□□□□ -2.5
SMC4-207ENST00000467263 LTC4SQ16873 150 aa-0.58□□□□□ -2.5
SMC4-207ENST00000467263 KRTAP6-1Q3LI64 71 aa-0.58□□□□□ -2.5
SMC4-207ENST00000467263 TMEM229BQ8NBD8 167 aa-0.58□□□□□ -2.5
SMC4-207ENST00000467263 IL20Q9NYY1 176 aa-0.58□□□□□ -2.5
SMC4-207ENST00000467263 COMMD3Q9UBI1 195 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms