RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 MED11Q9P086 117 aa0.31□□□□□ -2.36
LRCH3-211ENST00000466054 CASC2Q6XLA1 102 aa0.3□□□□□ -2.36
LRCH3-211ENST00000466054 C5orf17Q8NAS9 161 aa0.3□□□□□ -2.36
LRCH3-211ENST00000466054 LRTM1Q9HBL6 345 aa0.3□□□□□ -2.36
LRCH3-211ENST00000466054 NAT8BQ9UHF3 227 aa0.3□□□□□ -2.36
LRCH3-211ENST00000466054 ZCCHC11Q5TAX3 1644 aaKnown RBP0.29□□□□□ -2.36
LRCH3-211ENST00000466054 C10orf99Q6UWK7 81 aa0.29□□□□□ -2.36
LRCH3-211ENST00000466054 OR5AK2Q8NH90 309 aa0.29□□□□□ -2.36
LRCH3-211ENST00000466054 TECPR2O15040 1411 aa0.29□□□□□ -2.36
LRCH3-211ENST00000466054 ANKRD31Q8N7Z5 1873 aa0.29□□□□□ -2.36
LRCH3-211ENST00000466054 SYNMO15061 1565 aa0.28□□□□□ -2.36
LRCH3-211ENST00000466054 TRDV1A0A1B0GX56 115 aa0.28□□□□□ -2.36
LRCH3-211ENST00000466054 TMEM238C9JI98 176 aa0.28□□□□□ -2.36
LRCH3-211ENST00000466054 PPP5D1E7EU14 171 aa0.28□□□□□ -2.36
LRCH3-211ENST00000466054 SULT1C4O75897 302 aa0.28□□□□□ -2.36
LRCH3-211ENST00000466054 TRACP01848 142 aa0.28□□□□□ -2.36
LRCH3-211ENST00000466054 SERPINB1P30740 379 aa0.28□□□□□ -2.36
LRCH3-211ENST00000466054 CAV3P56539 151 aa0.28□□□□□ -2.36
LRCH3-211ENST00000466054 NEDD8Q15843 81 aa0.28□□□□□ -2.36
LRCH3-211ENST00000466054 TSKUQ8WUA8 353 aa0.28□□□□□ -2.36
LRCH3-211ENST00000466054 TAF9BQ9HBM6 251 aa0.28□□□□□ -2.36
LRCH3-211ENST00000466054 CACNA1EQ15878 2313 aa0.28□□□□□ -2.36
LRCH3-211ENST00000466054 ROCK1Q13464 1354 aa0.28□□□□□ -2.36
LRCH3-211ENST00000466054 TNCP24821 2201 aa0.28□□□□□ -2.37
LRCH3-211ENST00000466054 BCORL1Q5H9F3 1711 aa0.27□□□□□ -2.37
LRCH3-211ENST00000466054 KIAA1549LQ6ZVL6 1849 aa0.27□□□□□ -2.37
LRCH3-211ENST00000466054 C5orf58C9J3I9 102 aa0.27□□□□□ -2.37
LRCH3-211ENST00000466054 FABP2P12104 132 aa0.27□□□□□ -2.37
LRCH3-211ENST00000466054 NDUFA6P56556 154 aa0.27□□□□□ -2.37
LRCH3-211ENST00000466054 QRFPP83859 136 aa0.27□□□□□ -2.37
LRCH3-211ENST00000466054 C3orf33Q6P1S2 294 aa0.27□□□□□ -2.37
LRCH3-211ENST00000466054 IZUMO2Q6UXV1 221 aa0.27□□□□□ -2.37
LRCH3-211ENST00000466054 CDC26Q8NHZ8 85 aa0.27□□□□□ -2.37
LRCH3-211ENST00000466054 DYDC1Q8WWB3 177 aa0.27□□□□□ -2.37
LRCH3-211ENST00000466054 AP1S3Q96PC3 154 aa0.27□□□□□ -2.37
LRCH3-211ENST00000466054 HOPXQ9BPY8 73 aaPredicted RBP0.27□□□□□ -2.37
LRCH3-211ENST00000466054 LOC285556D6RIA3 1793 aa0.27□□□□□ -2.37
LRCH3-211ENST00000466054 E5RI56 91 aa0.26□□□□□ -2.37
LRCH3-211ENST00000466054 CRYBA4P53673 196 aa0.26□□□□□ -2.37
LRCH3-211ENST00000466054 XAF1Q6GPH4 301 aa0.26□□□□□ -2.37
LRCH3-211ENST00000466054 DCUN1D2Q6PH85 259 aa0.26□□□□□ -2.37
LRCH3-211ENST00000466054 OR5H6Q8NGV6 325 aa0.26□□□□□ -2.37
LRCH3-211ENST00000466054 CIB3Q96Q77 187 aaPredicted RBP0.26□□□□□ -2.37
LRCH3-211ENST00000466054 LPAR5Q9H1C0 372 aa0.26□□□□□ -2.37
LRCH3-211ENST00000466054 GID8Q9NWU2 228 aa0.26□□□□□ -2.37
LRCH3-211ENST00000466054 LAMTOR2Q9Y2Q5 125 aa0.26□□□□□ -2.37
LRCH3-211ENST00000466054 NAV2Q8IVL1 2488 aa0.26□□□□□ -2.37
LRCH3-211ENST00000466054 KMT2DO14686 5537 aa0.26□□□□□ -2.37
LRCH3-211ENST00000466054 NUP210Q8TEM1 1887 aaPredicted RBP0.25□□□□□ -2.37
LRCH3-211ENST00000466054 USP54Q70EL1 1684 aa0.25□□□□□ -2.37
LRCH3-211ENST00000466054 CTTNBP2Q8WZ74 1663 aa0.25□□□□□ -2.37
LRCH3-211ENST00000466054 C3orf85A0A1B0GTC6 90 aa0.25□□□□□ -2.37
LRCH3-211ENST00000466054 MAP1LC3B2A6NCE7 125 aa0.25□□□□□ -2.37
LRCH3-211ENST00000466054 GYPBP06028 91 aa0.25□□□□□ -2.37
LRCH3-211ENST00000466054 SAA1P0DJI8 122 aaPredicted RBP0.25□□□□□ -2.37
LRCH3-211ENST00000466054 BCL2P10415 239 aa0.25□□□□□ -2.37
LRCH3-211ENST00000466054 TPT1P13693 172 aaKnown RBP0.25□□□□□ -2.37
LRCH3-211ENST00000466054 PRELID3AQ96N28 172 aa0.25□□□□□ -2.37
LRCH3-211ENST00000466054 KNTC1P50748 2209 aa0.24□□□□□ -2.37
LRCH3-211ENST00000466054 GABARAPH6UMI1 98 aa0.24□□□□□ -2.37
LRCH3-211ENST00000466054 PFDN1O60925 122 aa0.24□□□□□ -2.37
LRCH3-211ENST00000466054 RPS3P23396 243 aaKnown RBP eCLIP0.24□□□□□ -2.37
LRCH3-211ENST00000466054 SDC2P34741 201 aa0.24□□□□□ -2.37
LRCH3-211ENST00000466054 SPINK13Q1W4C9 94 aa0.24□□□□□ -2.37
LRCH3-211ENST00000466054 TRIQKQ629K1 86 aa0.24□□□□□ -2.37
LRCH3-211ENST00000466054 CLEC2BQ92478 149 aa0.24□□□□□ -2.37
LRCH3-211ENST00000466054 H7BYZ3 331 aa0.23□□□□□ -2.37
LRCH3-211ENST00000466054 MAXP61244 160 aa0.23□□□□□ -2.37
LRCH3-211ENST00000466054 CCSMST1Q4G0I0 132 aa0.23□□□□□ -2.37
LRCH3-211ENST00000466054 TMEM78Q5T7P6 136 aa0.23□□□□□ -2.37
LRCH3-211ENST00000466054 TCTEX1D1Q8N7M0 179 aa0.23□□□□□ -2.37
LRCH3-211ENST00000466054 TMEM229BQ8NBD8 167 aa0.23□□□□□ -2.37
LRCH3-211ENST00000466054 TCOF1Q13428 1488 aaKnown RBP0.22□□□□□ -2.37
LRCH3-211ENST00000466054 ANK1P16157 1881 aa0.22□□□□□ -2.37
LRCH3-211ENST00000466054 DSPPQ9NZW4 1301 aa0.22□□□□□ -2.37
LRCH3-211ENST00000466054 PRORSD1PA6NEY8 169 aa0.22□□□□□ -2.37
LRCH3-211ENST00000466054 ARL5CA6NH57 179 aa0.22□□□□□ -2.37
LRCH3-211ENST00000466054 BBIP1A8MTZ0 92 aa0.22□□□□□ -2.37
LRCH3-211ENST00000466054 S100A11P31949 105 aa0.22□□□□□ -2.37
LRCH3-211ENST00000466054 DNAJB13P59910 316 aa0.22□□□□□ -2.37
LRCH3-211ENST00000466054 SNRPD3P62318 126 aaKnown RBP0.22□□□□□ -2.37
LRCH3-211ENST00000466054 ANGPTL5Q86XS5 388 aa0.22□□□□□ -2.37
LRCH3-211ENST00000466054 CCDC32Q9BV29 185 aa0.22□□□□□ -2.37
LRCH3-211ENST00000466054 DLC1Q96QB1 1528 aa0.22□□□□□ -2.37
LRCH3-211ENST00000466054 TANC2Q9HCD6 1990 aa0.21□□□□□ -2.38
LRCH3-211ENST00000466054 ATG2AQ2TAZ0 1938 aa0.21□□□□□ -2.38
LRCH3-211ENST00000466054 TRBV27A0A0K0K1C4 114 aa0.21□□□□□ -2.38
LRCH3-211ENST00000466054 A0A1W2PPB8 328 aa0.21□□□□□ -2.38
LRCH3-211ENST00000466054 A0A1W2PRS3 328 aa0.21□□□□□ -2.38
LRCH3-211ENST00000466054 KIR3DP1A8MWS1 328 aa0.21□□□□□ -2.38
LRCH3-211ENST00000466054 EVI2AP22794 236 aa0.21□□□□□ -2.38
LRCH3-211ENST00000466054 GLYATL3Q5SZD4 288 aa0.21□□□□□ -2.38
LRCH3-211ENST00000466054 SPINK6Q6UWN8 80 aa0.21□□□□□ -2.38
LRCH3-211ENST00000466054 C3orf62Q6ZUJ4 267 aa0.21□□□□□ -2.38
LRCH3-211ENST00000466054 LINC00305Q7Z4B0 112 aa0.21□□□□□ -2.38
LRCH3-211ENST00000466054 DEFB132Q7Z7B7 95 aa0.21□□□□□ -2.38
LRCH3-211ENST00000466054 C19orf12Q9NSK7 152 aa0.21□□□□□ -2.38
LRCH3-211ENST00000466054 MRPL35Q9NZE8 188 aaKnown RBP0.21□□□□□ -2.38
LRCH3-211ENST00000466054 ATPIF1Q9UII2 106 aa0.21□□□□□ -2.38
LRCH3-211ENST00000466054 MPC1Q9Y5U8 109 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms