RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 MPV17L2Q567V2 206 aa14.18□□□□□ -0.14
SYNE4-204ENST00000465425 CCDC140Q96MF4 163 aa14.18□□□□□ -0.14
SYNE4-204ENST00000465425 COX11Q9Y6N1 276 aa14.18□□□□□ -0.14
SYNE4-204ENST00000465425 CENPVL3A0A0U1RRI6 287 aa14.17□□□□□ -0.14
SYNE4-204ENST00000465425 SRSF2Q01130 221 aaKnown RBP14.17□□□□□ -0.14
SYNE4-204ENST00000465425 RNF182Q8N6D2 247 aa14.17□□□□□ -0.14
SYNE4-204ENST00000465425 KLK9Q2XQG4 91 aa14.16□□□□□ -0.14
SYNE4-204ENST00000465425 KLK9Q9UKQ9 250 aa14.16□□□□□ -0.14
SYNE4-204ENST00000465425 IGHV3OR16-13A0A075B7E8 117 aa14.16□□□□□ -0.14
SYNE4-204ENST00000465425 A0A096LNJ9 63 aa14.16□□□□□ -0.14
SYNE4-204ENST00000465425 TRBV7-1A0A0A6YYK4 115 aa14.16□□□□□ -0.14
SYNE4-204ENST00000465425 IGHV3-74A0A0B4J1X5 117 aa14.16□□□□□ -0.14
SYNE4-204ENST00000465425 RBAKDNA6NC62 111 aa14.16□□□□□ -0.14
SYNE4-204ENST00000465425 TCF21O43680 179 aa14.16□□□□□ -0.14
SYNE4-204ENST00000465425 NUDT3O95989 172 aa14.16□□□□□ -0.14
SYNE4-204ENST00000465425 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.16□□□□□ -0.14
SYNE4-204ENST00000465425 PIP4P2Q8N4L2 257 aa14.16□□□□□ -0.14
SYNE4-204ENST00000465425 METTL26Q96S19 204 aa14.16□□□□□ -0.14
SYNE4-204ENST00000465425 LINC01548A6NM66 108 aa14.15□□□□□ -0.14
SYNE4-204ENST00000465425 PRAC2D3DTV9 90 aa14.15□□□□□ -0.14
SYNE4-204ENST00000465425 NCR2O95944 276 aa14.15□□□□□ -0.14
SYNE4-204ENST00000465425 NHLH1Q02575 133 aa14.15□□□□□ -0.14
SYNE4-204ENST00000465425 Q6ZVH6 145 aa14.15□□□□□ -0.14
SYNE4-204ENST00000465425 SMKR1H3BMG3 65 aa14.15□□□□□ -0.14
SYNE4-204ENST00000465425 HBDP02042 147 aa14.15□□□□□ -0.14
SYNE4-204ENST00000465425 C12orf54Q6X4T0 127 aa14.15□□□□□ -0.14
SYNE4-204ENST00000465425 HIVEP3Q5T1R4 2406 aa14.15□□□□□ -0.15
SYNE4-204ENST00000465425 CLPSL1A2RUU4 121 aa14.14□□□□□ -0.15
SYNE4-204ENST00000465425 NPYP01303 97 aa14.14□□□□□ -0.15
SYNE4-204ENST00000465425 PTTG1IPP53801 180 aa14.14□□□□□ -0.15
SYNE4-204ENST00000465425 IL17RELQ6ZVW7 336 aa14.14□□□□□ -0.15
SYNE4-204ENST00000465425 C5orf56Q8N8D9 126 aa14.14□□□□□ -0.15
SYNE4-204ENST00000465425 FXYD7P58549 80 aa14.13□□□□□ -0.15
SYNE4-204ENST00000465425 LINC01559Q495D7 138 aa14.13□□□□□ -0.15
SYNE4-204ENST00000465425 MSRB1Q9NZV6 116 aa14.13□□□□□ -0.15
SYNE4-204ENST00000465425 CACNA1BQ00975 2339 aa14.13□□□□□ -0.15
SYNE4-204ENST00000465425 IGHV3-49A0A0A0MS15 119 aa14.13□□□□□ -0.15
SYNE4-204ENST00000465425 ZNF207O43670 478 aaKnown RBP14.13□□□□□ -0.15
SYNE4-204ENST00000465425 TMEM219Q86XT9 240 aa14.13□□□□□ -0.15
SYNE4-204ENST00000465425 CNFNQ9BYD5 112 aa14.13□□□□□ -0.15
SYNE4-204ENST00000465425 PPBPP02775 128 aa14.12□□□□□ -0.15
SYNE4-204ENST00000465425 HIST1H1AQ02539 215 aaPredicted RBP14.12□□□□□ -0.15
SYNE4-204ENST00000465425 ATP5G2Q06055 141 aa14.12□□□□□ -0.15
SYNE4-204ENST00000465425 TMEM78Q5T7P6 136 aa14.12□□□□□ -0.15
SYNE4-204ENST00000465425 ZNF575Q86XF7 245 aa14.12□□□□□ -0.15
SYNE4-204ENST00000465425 ITLN2Q8WWU7 325 aaPredicted RBP14.12□□□□□ -0.15
SYNE4-204ENST00000465425 COX8AP10176 69 aa14.12□□□□□ -0.15
SYNE4-204ENST00000465425 SFTPCP11686 197 aa14.12□□□□□ -0.15
SYNE4-204ENST00000465425 BVES-AS1Q5T3Y7 98 aa14.12□□□□□ -0.15
SYNE4-204ENST00000465425 PRSS57Q6UWY2 283 aa14.12□□□□□ -0.15
SYNE4-204ENST00000465425 MAP1LC3AQ9H492 121 aa14.12□□□□□ -0.15
SYNE4-204ENST00000465425 LGALS9BQ3B8N2 356 aa14.11□□□□□ -0.15
SYNE4-204ENST00000465425 LGALS9CQ6DKI2 356 aa14.11□□□□□ -0.15
SYNE4-204ENST00000465425 CACNG7P62955 275 aa14.1□□□□□ -0.15
SYNE4-204ENST00000465425 MOB4Q9Y3A3 225 aa14.1□□□□□ -0.15
SYNE4-204ENST00000465425 AKAP6Q13023 2319 aa14.1□□□□□ -0.15
SYNE4-204ENST00000465425 SPTBN4Q9H254 2564 aa14.1□□□□□ -0.15
SYNE4-204ENST00000465425 PPIFP30405 207 aaKnown RBP14.1□□□□□ -0.15
SYNE4-204ENST00000465425 UBE2V1Q13404 147 aa14.1□□□□□ -0.15
SYNE4-204ENST00000465425 C8orf86Q6ZUL3 223 aa14.1□□□□□ -0.15
SYNE4-204ENST00000465425 IFI27L1Q96BM0 104 aa14.1□□□□□ -0.15
SYNE4-204ENST00000465425 AGPAT4-IT1Q9H0P7 198 aa14.1□□□□□ -0.15
SYNE4-204ENST00000465425 IGHV3OR16-10A0A075B7F0 116 aa14.09□□□□□ -0.15
SYNE4-204ENST00000465425 TRAV41A0A0B4J266 112 aa14.09□□□□□ -0.15
SYNE4-204ENST00000465425 CCL25O15444 150 aa14.09□□□□□ -0.15
SYNE4-204ENST00000465425 RNF185Q96GF1 192 aa14.09□□□□□ -0.15
SYNE4-204ENST00000465425 C19orf84I3L1E1 186 aa14.09□□□□□ -0.15
SYNE4-204ENST00000465425 UQCRFS1P47985 274 aa14.09□□□□□ -0.15
SYNE4-204ENST00000465425 PAX8Q06710 450 aa14.09□□□□□ -0.15
SYNE4-204ENST00000465425 MRPL53Q96EL3 112 aaKnown RBP14.09□□□□□ -0.15
SYNE4-204ENST00000465425 DPF1Q92782 380 aa14.08□□□□□ -0.16
SYNE4-204ENST00000465425 LINC00527Q9UJ94 153 aa14.08□□□□□ -0.16
SYNE4-204ENST00000465425 TRAV8-2A0A0B4J237 113 aa14.08□□□□□ -0.16
SYNE4-204ENST00000465425 SNAI2O43623 268 aa14.08□□□□□ -0.16
SYNE4-204ENST00000465425 HIF1ANQ9NWT6 349 aa14.08□□□□□ -0.16
SYNE4-204ENST00000465425 IGKV3D-20A0A0C4DH25 116 aa14.07□□□□□ -0.16
SYNE4-204ENST00000465425 FAM223BA6NKX1 122 aa14.07□□□□□ -0.16
SYNE4-204ENST00000465425 FAM223AQ8IWN6 122 aa14.07□□□□□ -0.16
SYNE4-204ENST00000465425 IGHV4-39P01824 125 aa14.07□□□□□ -0.16
SYNE4-204ENST00000465425 TRGV3P03979 118 aa14.07□□□□□ -0.16
SYNE4-204ENST00000465425 VAMP3Q15836 100 aa14.07□□□□□ -0.16
SYNE4-204ENST00000465425 DEFB125Q8N687 156 aa14.07□□□□□ -0.16
SYNE4-204ENST00000465425 OR1N2Q8NGR9 330 aa14.07□□□□□ -0.16
SYNE4-204ENST00000465425 C16orf92Q96LL3 132 aa14.07□□□□□ -0.16
SYNE4-204ENST00000465425 CHD8Q9HCK8 2581 aa14.07□□□□□ -0.16
SYNE4-204ENST00000465425 NCOR2Q9Y618 2525 aa14.06□□□□□ -0.16
SYNE4-204ENST00000465425 TNFRSF6BO95407 300 aa14.06□□□□□ -0.16
SYNE4-204ENST00000465425 SMIM15Q7Z3B0 74 aa14.06□□□□□ -0.16
SYNE4-204ENST00000465425 ATP6V0BQ99437 205 aa14.06□□□□□ -0.16
SYNE4-204ENST00000465425 NXT2Q9NPJ8 142 aaKnown RBP14.06□□□□□ -0.16
SYNE4-204ENST00000465425 GNLYP22749 145 aa14.06□□□□□ -0.16
SYNE4-204ENST00000465425 ANKRD39Q53RE8 183 aa14.06□□□□□ -0.16
SYNE4-204ENST00000465425 BRD3OSQ6XYD6 125 aa14.06□□□□□ -0.16
SYNE4-204ENST00000465425 PSMG3-AS1Q96PY0 264 aa14.06□□□□□ -0.16
SYNE4-204ENST00000465425 U3KQE9 123 aa14.06□□□□□ -0.16
SYNE4-204ENST00000465425 TRAV40A0A0B4J280 105 aa14.05□□□□□ -0.16
SYNE4-204ENST00000465425 IGHV1-69DA0A0B4J2H0 117 aa14.05□□□□□ -0.16
SYNE4-204ENST00000465425 IGHV1-69P01742 117 aa14.05□□□□□ -0.16
SYNE4-204ENST00000465425 EVI2AP22794 236 aa14.05□□□□□ -0.16
SYNE4-204ENST00000465425 ARL3P36405 182 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms