RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 IGF2BP2-AS1Q96M15 143 aa13.48□□□□□ -0.25
SCAMP3-204ENST00000465312 LINC00477Q96M19 166 aa13.48□□□□□ -0.25
SCAMP3-204ENST00000465312 NBEAL2Q6ZNJ1 2754 aa13.48□□□□□ -0.25
SCAMP3-204ENST00000465312 COL7A1Q02388 2944 aa13.47□□□□□ -0.25
SCAMP3-204ENST00000465312 A0A1W2PRE2 83 aa13.47□□□□□ -0.25
SCAMP3-204ENST00000465312 ZNF705EA8MWA4 302 aaPredicted RBP13.47□□□□□ -0.25
SCAMP3-204ENST00000465312 GGTLC3B5MD39 225 aa13.47□□□□□ -0.25
SCAMP3-204ENST00000465312 CT45A10P0DMU9 189 aa13.47□□□□□ -0.25
SCAMP3-204ENST00000465312 Q8TAT8 98 aa13.47□□□□□ -0.25
SCAMP3-204ENST00000465312 SUN5Q8TC36 379 aa13.47□□□□□ -0.25
SCAMP3-204ENST00000465312 MBD3L1Q8WWY6 194 aa13.47□□□□□ -0.25
SCAMP3-204ENST00000465312 AGPAT4-IT1Q9H0P7 198 aa13.47□□□□□ -0.25
SCAMP3-204ENST00000465312 YTHDF2Q9Y5A9 579 aaKnown RBP13.47□□□□□ -0.25
SCAMP3-204ENST00000465312 HBE1P02100 147 aa13.46□□□□□ -0.25
SCAMP3-204ENST00000465312 C9orf47Q6ZRZ4 202 aa13.46□□□□□ -0.25
SCAMP3-204ENST00000465312 CSNK1G2-AS1Q8NCQ2 148 aa13.46□□□□□ -0.25
SCAMP3-204ENST00000465312 HUWE1Q7Z6Z7 4374 aaKnown RBP13.46□□□□□ -0.26
SCAMP3-204ENST00000465312 A0A0J9YWU9 116 aa13.45□□□□□ -0.26
SCAMP3-204ENST00000465312 RBAKDNA6NC62 111 aa13.45□□□□□ -0.26
SCAMP3-204ENST00000465312 FAM74A7A6NL05 159 aa13.45□□□□□ -0.26
SCAMP3-204ENST00000465312 DEFB4AO15263 64 aa13.45□□□□□ -0.26
SCAMP3-204ENST00000465312 HTN1P15515 57 aa13.45□□□□□ -0.26
SCAMP3-204ENST00000465312 ZNF138P52744 262 aa13.45□□□□□ -0.26
SCAMP3-204ENST00000465312 ODF3Q96PU9 254 aa13.45□□□□□ -0.26
SCAMP3-204ENST00000465312 PAGE4O60829 102 aa13.44□□□□□ -0.26
SCAMP3-204ENST00000465312 GPX1P07203 203 aa13.44□□□□□ -0.26
SCAMP3-204ENST00000465312 PPT1P50897 306 aa13.44□□□□□ -0.26
SCAMP3-204ENST00000465312 SGK494Q96LW2 274 aa13.44□□□□□ -0.26
SCAMP3-204ENST00000465312 WWC2-AS2Q96NR7 200 aa13.44□□□□□ -0.26
SCAMP3-204ENST00000465312 LINC01587Q99440 93 aa13.44□□□□□ -0.26
SCAMP3-204ENST00000465312 NKX6-2Q9C056 277 aaPredicted RBP13.44□□□□□ -0.26
SCAMP3-204ENST00000465312 ZNF492Q9P255 531 aa13.44□□□□□ -0.26
SCAMP3-204ENST00000465312 GNG13Q9P2W3 67 aa13.44□□□□□ -0.26
SCAMP3-204ENST00000465312 EPDR1Q9UM22 224 aa13.44□□□□□ -0.26
SCAMP3-204ENST00000465312 TRAV12-3A0A0B4J271 114 aa13.43□□□□□ -0.26
SCAMP3-204ENST00000465312 IGHV4-28A0A0C4DH34 117 aa13.43□□□□□ -0.26
SCAMP3-204ENST00000465312 SERTM2A0A1B0GWG4 89 aa13.43□□□□□ -0.26
SCAMP3-204ENST00000465312 CRXO43186 299 aaPredicted RBP13.43□□□□□ -0.26
SCAMP3-204ENST00000465312 TCRAP04437 139 aa13.43□□□□□ -0.26
SCAMP3-204ENST00000465312 MIFP14174 115 aa13.43□□□□□ -0.26
SCAMP3-204ENST00000465312 RNASE4P34096 147 aaKnown RBP13.43□□□□□ -0.26
SCAMP3-204ENST00000465312 GFI1BQ5VTD9 330 aa13.43□□□□□ -0.26
SCAMP3-204ENST00000465312 C1orf158Q8N1D5 194 aa13.43□□□□□ -0.26
SCAMP3-204ENST00000465312 CYB561D1Q8N8Q1 229 aa13.43□□□□□ -0.26
SCAMP3-204ENST00000465312 NIPSNAP3BQ9BS92 247 aa13.43□□□□□ -0.26
SCAMP3-204ENST00000465312 ATG101Q9BSB4 218 aa13.43□□□□□ -0.26
SCAMP3-204ENST00000465312 NDFIP1Q9BT67 221 aa13.43□□□□□ -0.26
SCAMP3-204ENST00000465312 TRAV8-1A0A0A6YYK1 113 aa13.42□□□□□ -0.26
SCAMP3-204ENST00000465312 F6UZH7 168 aa13.42□□□□□ -0.26
SCAMP3-204ENST00000465312 ATP5G3P48201 142 aa13.42□□□□□ -0.26
SCAMP3-204ENST00000465312 EMP1P54849 157 aa13.42□□□□□ -0.26
SCAMP3-204ENST00000465312 KIR3DS1Q14943 382 aa13.42□□□□□ -0.26
SCAMP3-204ENST00000465312 RRN3P1Q2M238 152 aa13.42□□□□□ -0.26
SCAMP3-204ENST00000465312 ARL6IP6Q8N6S5 226 aa13.42□□□□□ -0.26
SCAMP3-204ENST00000465312 X6R8D5 127 aa13.42□□□□□ -0.26
SCAMP3-204ENST00000465312 TENM3Q9P273 2699 aa13.42□□□□□ -0.26
SCAMP3-204ENST00000465312 C7orf71A4D174 169 aa13.41□□□□□ -0.26
SCAMP3-204ENST00000465312 PEX7O00628 323 aa13.41□□□□□ -0.26
SCAMP3-204ENST00000465312 IFNA1P01562 189 aa13.41□□□□□ -0.26
SCAMP3-204ENST00000465312 BLOC1S1P78537 153 aa13.41□□□□□ -0.26
SCAMP3-204ENST00000465312 BTN1A1Q13410 526 aa13.41□□□□□ -0.26
SCAMP3-204ENST00000465312 ZNF705AQ6ZN79 300 aaPredicted RBP13.41□□□□□ -0.26
SCAMP3-204ENST00000465312 TMEM256Q8N2U0 113 aa13.41□□□□□ -0.26
SCAMP3-204ENST00000465312 MANBALQ9NQG1 85 aa13.41□□□□□ -0.26
SCAMP3-204ENST00000465312 ZNF705GA8MUZ8 300 aaPredicted RBP13.4□□□□□ -0.26
SCAMP3-204ENST00000465312 PRNTQ86SH4 94 aa13.4□□□□□ -0.26
SCAMP3-204ENST00000465312 EDA2RQ9HAV5 297 aa13.4□□□□□ -0.26
SCAMP3-204ENST00000465312 ARL2-SNX15V9GYD0 113 aa13.4□□□□□ -0.26
SCAMP3-204ENST00000465312 TRAV34A0A0B4J273 112 aa13.39□□□□□ -0.27
SCAMP3-204ENST00000465312 LOC102723971A0A1B0GUV8 181 aa13.39□□□□□ -0.27
SCAMP3-204ENST00000465312 SMIM9A6NGZ8 99 aa13.39□□□□□ -0.27
SCAMP3-204ENST00000465312 C11orf94C9JXX5 98 aa13.39□□□□□ -0.27
SCAMP3-204ENST00000465312 RBMY1A1P0DJD3 496 aaKnown RBP13.39□□□□□ -0.27
SCAMP3-204ENST00000465312 RBMY1CP0DJD4 496 aa13.39□□□□□ -0.27
SCAMP3-204ENST00000465312 AKR1C3P42330 323 aa13.39□□□□□ -0.27
SCAMP3-204ENST00000465312 UBE2G1P62253 170 aa13.39□□□□□ -0.27
SCAMP3-204ENST00000465312 CCL20P78556 96 aa13.39□□□□□ -0.27
SCAMP3-204ENST00000465312 RBMY1FQ15415 496 aaKnown RBP13.39□□□□□ -0.27
SCAMP3-204ENST00000465312 Q8NAQ8 132 aa13.39□□□□□ -0.27
SCAMP3-204ENST00000465312 HIST1H2BAQ96A08 127 aa13.39□□□□□ -0.27
SCAMP3-204ENST00000465312 C20orf144Q9BQM9 153 aa13.39□□□□□ -0.27
SCAMP3-204ENST00000465312 TREM1Q9NP99 234 aa13.39□□□□□ -0.27
SCAMP3-204ENST00000465312 TRAV1-1A0A0B4J248 108 aa13.38□□□□□ -0.27
SCAMP3-204ENST00000465312 H7BYZ3 331 aa13.38□□□□□ -0.27
SCAMP3-204ENST00000465312 CRISP2P16562 243 aa13.38□□□□□ -0.27
SCAMP3-204ENST00000465312 FLI1Q01543 452 aaPredicted RBP13.38□□□□□ -0.27
SCAMP3-204ENST00000465312 TMEM75Q8N9X5 138 aa13.38□□□□□ -0.27
SCAMP3-204ENST00000465312 NEU1Q99519 415 aa13.38□□□□□ -0.27
SCAMP3-204ENST00000465312 C11orf68Q9H3H3 251 aaKnown RBP13.38□□□□□ -0.27
SCAMP3-204ENST00000465312 PSG8Q9UQ74 426 aa13.38□□□□□ -0.27
SCAMP3-204ENST00000465312 KLLNB2CW77 178 aa13.37□□□□□ -0.27
SCAMP3-204ENST00000465312 CCDC28AQ8IWP9 274 aa13.37□□□□□ -0.27
SCAMP3-204ENST00000465312 FAM19A4Q96LR4 140 aa13.37□□□□□ -0.27
SCAMP3-204ENST00000465312 LENEPQ9Y5L5 61 aa13.37□□□□□ -0.27
SCAMP3-204ENST00000465312 TRBV7-9A0A0J9YWB2 115 aa13.36□□□□□ -0.27
SCAMP3-204ENST00000465312 RGS13O14921 159 aa13.36□□□□□ -0.27
SCAMP3-204ENST00000465312 PRM2P04554 102 aa13.36□□□□□ -0.27
SCAMP3-204ENST00000465312 NMBP08949 121 aa13.36□□□□□ -0.27
SCAMP3-204ENST00000465312 TAS2R60P59551 318 aa13.36□□□□□ -0.27
SCAMP3-204ENST00000465312 PMS2P11Q13670 270 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms