RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 TPRKBQ9Y3C4 175 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 KIAA1549LQ6ZVL6 1849 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 FAM135BQ49AJ0 1406 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 A0A096LPI6 279 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 TRBV7-6A0A0J9YX20 115 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 A0A1W2PRE2 83 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 MAP1LC3B2A6NCE7 125 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 ZNF727A8MUV8 499 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 BCL2P10415 239 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 G0S2P27469 103 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 DCUN1D2Q6PH85 259 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 IZUMO2Q6UXV1 221 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 Q6ZQY7 126 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 DEFB132Q7Z7B7 95 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 ANGPTL5Q86XS5 388 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 OR4B1Q8NGF8 309 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 CLEC2BQ92478 149 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 RMND5BQ96G75 393 aaPredicted RBP0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 CCL19Q99731 98 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 FAM103A1Q9BTL3 118 aaKnown RBP0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 LPAR5Q9H1C0 372 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 PTPRDP23468 1912 aa0.14□□□□□ -2.39
NUCKS1-202ENST00000464938 DLC1Q96QB1 1528 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 TRBV27A0A0K0K1C4 114 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 TRACP01848 142 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 MT-ND6P03923 174 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 SAA1P0DJI8 122 aaPredicted RBP0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 S100A11P31949 105 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 ZNF137PP52743 207 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 MAXP61244 160 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 VMA21Q3ZAQ7 101 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 TRIQKQ629K1 86 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 CASC2Q6XLA1 102 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 Q6ZS92 163 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 STX12Q86Y82 276 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 MORN4Q8NDC4 146 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 PLAC4Q8WY50 150 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 PRELID3AQ96N28 172 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 PCBD2Q9H0N5 130 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 NIT2Q9NQR4 276 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 MED11Q9P086 117 aa0.13□□□□□ -2.39
NUCKS1-202ENST00000464938 PBRM1Q86U86 1689 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 NUPR2A6NF83 97 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 FABP2P12104 132 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 S100A5P33763 92 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 SDC2P34741 201 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 SPINT3P49223 89 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 POLR2HP52434 150 aaKnown RBP0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 CCSMST1Q4G0I0 132 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 HRCT1Q6UXD1 115 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 OR5H6Q8NGV6 325 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 OR5AK2Q8NH90 309 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 GRPEL2Q8TAA5 225 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 THEM6Q8WUY1 208 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 DYDC1Q8WWB3 177 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 CIB3Q96Q77 187 aaPredicted RBP0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 NABP2Q9BQ15 211 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 ASH1LQ9NR48 2969 aaKnown RBP0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 ATPIF1Q9UII2 106 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 JPT1Q9UK76 154 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 BOKQ9UMX3 212 aaPredicted RBP0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 LAMTOR2Q9Y2Q5 125 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 MED31Q9Y3C7 131 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 APCP25054 2843 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 USP24Q9UPU5 2620 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 FGD6Q6ZV73 1430 aa0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 NUP210Q8TEM1 1887 aaPredicted RBP0.12□□□□□ -2.39
NUCKS1-202ENST00000464938 NBDYA0A0U1RRE5 68 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 LOC107984640A0A0U1RRK4 108 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 C3orf85A0A1B0GTC6 90 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 IGF2P01344 180 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 TPT1P13693 172 aaKnown RBP0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 NDUFA6P56556 154 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 SPINK7P58062 85 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 NEDD8Q15843 81 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 C6orf52Q5T4I8 152 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 XAF1Q6GPH4 301 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 CSAG1Q6PB30 78 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 TOMM20LQ6UXN7 152 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 LINC00305Q7Z4B0 112 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 CROCCP2Q86T23 111 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 TCTEX1D1Q8N7M0 179 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 NAT14Q8WUY8 206 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 CCDC32Q9BV29 185 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 CENPHQ9H3R5 247 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 C19orf12Q9NSK7 152 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 MRPL35Q9NZE8 188 aaKnown RBP0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 MPC1Q9Y5U8 109 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 SYNE1Q8NF91 8797 aaKnown RBP0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 DSPPQ9NZW4 1301 aa0.11□□□□□ -2.39
NUCKS1-202ENST00000464938 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 KNTC1P50748 2209 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 FAT4Q6V0I7 4981 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 TRAV13-1A0A0B4J241 112 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 E7EQ34 232 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 FAM107AO95990 144 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 GYPBP06028 91 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 FABP1P07148 127 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 RPL7P18124 248 aaKnown RBP0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 RPS3P23396 243 aaKnown RBP eCLIP0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms