RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 CST11Q9H112 138 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 TVP23BQ9NYZ1 205 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 ABRACLQ9P1F3 81 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 MICAL3Q7RTP6 2002 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 PARP14Q460N5 1801 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 XRN1Q8IZH2 1706 aaKnown RBP1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 PEAK1Q9H792 1746 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 PARP4Q9UKK3 1724 aaKnown RBP1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 RIMBP3Q9UFD9 1639 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 ALKQ9UM73 1620 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 NEXMIFQ5QGS0 1516 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 MYO18AQ92614 2054 aaKnown RBP1.9□□□□□ -2.1
HMGXB4-205ENST00000464480 PDCD11Q14690 1871 aaKnown RBP1.9□□□□□ -2.1
HMGXB4-205ENST00000464480 DOCK5Q9H7D0 1870 aa1.9□□□□□ -2.1
HMGXB4-205ENST00000464480 ADAMTSL3P82987 1691 aa1.9□□□□□ -2.1
HMGXB4-205ENST00000464480 SAMD9LQ8IVG5 1584 aa1.9□□□□□ -2.1
HMGXB4-205ENST00000464480 DIP2BQ9P265 1576 aa1.9□□□□□ -2.1
HMGXB4-205ENST00000464480 PXDNQ92626 1479 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 BAZ2AQ9UIF9 1905 aaKnown RBP1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 DOCK2Q92608 1830 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 TRBV19A0A075B6N1 114 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 TRAV27A0A087WT01 109 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 TRBV6-7A0A0A0MS04 114 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 TRAV8-2A0A0B4J237 113 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 TRAV13-1A0A0B4J241 112 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 IGKV2-24A0A0C4DH68 120 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 SYS1-DBNDD2H3BUS1 97 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 H3BUT2 72 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 M0R2P5 195 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 LYZL6O75951 148 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 IGKV1D-16P01601 117 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 SMIM13P0DJ93 91 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 PYYP10082 97 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 FGF6P10767 208 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 CRYGAP11844 174 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 C1QTNF8P60827 252 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 KRTDAPP60985 99 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 HBG1P69891 147 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 HBG2P69892 147 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 ELOCQ15369 112 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 ZNF141Q15928 474 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 RTL8BQ17RB0 113 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 C12orf74Q32Q52 190 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 LINC01545Q5VT33 79 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 FKBP1CQ5VVH2 108 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 ZCCHC23Q6ZST2 131 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 AAED1Q7RTV5 226 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 RPS19BP1Q86WX3 136 aaKnown RBP1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 BAGE3Q86Y29 109 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 BAGE2Q86Y30 109 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 LINC00337Q8N6G1 96 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 OR8A1Q8NGG7 326 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 OR2T10Q8NGZ9 312 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 MRPL30Q8TCC3 161 aaKnown RBP1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 FMC1Q96HJ9 113 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 NMNAT3Q96T66 252 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 MGST2Q99735 147 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 FAM60AQ9NP50 221 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 TRAPPC1Q9Y5R8 145 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 C2orf16Q68DN1 1984 aa1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 TNRC6AQ8NDV7 1962 aaKnown RBP1.9□□□□□ -2.11
HMGXB4-205ENST00000464480 ATAD5Q96QE3 1844 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 RGPD1P0DJD0 1748 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 SCN8AQ9UQD0 1980 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 CICQ96RK0 1608 aaPredicted RBP1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 TRAV12-2A0A075B6T6 113 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 TRAV14DV4A0A0A6YYC5 116 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 TRAV4A0A0B4J268 109 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 ZNF727A8MUV8 499 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 A8MWV9 139 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 SSSCA1O60232 199 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 ZNF737O75373 536 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 SOD1P00441 154 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 RBP4P02753 201 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 PRH1P02810 166 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 CD3DP04234 171 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 IGKV4-1P06312 121 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 SRP19P09132 144 aaKnown RBP1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 FOXA3P55318 350 aaPredicted RBP1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 DAD1P61803 113 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 DIAPH2-AS1Q14236 149 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 CDK5R1Q15078 307 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 ETDBQ3ZM63 59 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 Q5XG85 94 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 DGAT2L6Q6ZPD8 337 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 Q6ZRU5 148 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 PRNTQ86SH4 94 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 MSRB3Q8IXL7 192 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 EXOC3-AS1Q8N2X6 119 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 SLC25A45Q8N413 288 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 C15orf53Q8NAA6 179 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 OR8B3Q8NGG8 313 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 FAM213BQ8TBF2 198 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 RPS4Y2Q8TD47 263 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 PPP1R1CQ8WVI7 109 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 AQP3Q92482 292 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 LSM10Q969L4 123 aaKnown RBP1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 DPH3Q96FX2 82 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 SLC25A44Q96H78 314 aaPredicted RBP1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 PRELID3AQ96N28 172 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms