RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 NPIPB6E9PJ23 425 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 M0R2Z0 102 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 IGKV2D-40P01614 121 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-206ENST00000462613 GPX1P07203 203 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 NMBP08949 121 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 TAGLN2P37802 199 aaKnown RBP4.67□□□□□ -1.66
SF3B1-206ENST00000462613 FHITP49789 147 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 ZNF138P52744 262 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 DEFB1P60022 68 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 UBE2G1P62253 170 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 ZNF726P1Q15940 193 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 ALKAL2Q6UX46 152 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 CYB561D1Q8N8Q1 229 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 SUN5Q8TC36 379 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 HIST1H2BAQ96A08 127 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 WWC2-AS2Q96NR7 200 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 TXNDC17Q9BRA2 123 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 OVOL2Q9BRP0 275 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 ATG101Q9BSB4 218 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 LENEPQ9Y5L5 61 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 TRAV1-1A0A0B4J248 108 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 TMEM189A5PLL7 270 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 FAM74A7A6NL05 159 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 PRAC2D3DTV9 90 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 H7BYZ3 331 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 J3KRW8 73 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 TCRAP04437 139 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 RRN3P1Q2M238 152 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 SAPCD1Q5SSQ6 148 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 AMTNQ6UX39 209 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 GOLT1AQ6ZVE7 132 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 SSX7Q7RTT5 188 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 CCDC28AQ8IWP9 274 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 LINC01587Q99440 93 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 AGPAT4-IT1Q9H0P7 198 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 TMPRSS5Q9H3S3 457 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 RETNQ9HD89 108 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 ZNF492Q9P255 531 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 EPDR1Q9UM22 224 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 CMYA5Q8N3K9 4069 aa4.66□□□□□ -1.66
SF3B1-206ENST00000462613 TRAV12-2A0A075B6T6 113 aa4.65□□□□□ -1.67
SF3B1-206ENST00000462613 TEX48A0A1B0GUV7 120 aa4.65□□□□□ -1.67
SF3B1-206ENST00000462613 C7orf71A4D174 169 aa4.65□□□□□ -1.67
SF3B1-206ENST00000462613 PEX7O00628 323 aa4.65□□□□□ -1.67
SF3B1-206ENST00000462613 PAGE4O60829 102 aa4.65□□□□□ -1.67
SF3B1-206ENST00000462613 S100A9P06702 114 aaKnown RBP4.65□□□□□ -1.67
SF3B1-206ENST00000462613 CT45A10P0DMU9 189 aa4.65□□□□□ -1.67
SF3B1-206ENST00000462613 AKR1C3P42330 323 aa4.65□□□□□ -1.67
SF3B1-206ENST00000462613 GNG5P63218 68 aa4.65□□□□□ -1.67
SF3B1-206ENST00000462613 FLI1Q01543 452 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-206ENST00000462613 ERCC8Q13216 396 aa4.65□□□□□ -1.67
SF3B1-206ENST00000462613 NEU1Q99519 415 aa4.65□□□□□ -1.67
SF3B1-206ENST00000462613 VGLL1Q99990 258 aa4.65□□□□□ -1.67
SF3B1-206ENST00000462613 PYGO2Q9BRQ0 406 aa4.65□□□□□ -1.67
SF3B1-206ENST00000462613 C11orf68Q9H3H3 251 aaKnown RBP4.65□□□□□ -1.67
SF3B1-206ENST00000462613 TREM1Q9NP99 234 aa4.65□□□□□ -1.67
SF3B1-206ENST00000462613 GNG13Q9P2W3 67 aa4.65□□□□□ -1.67
SF3B1-206ENST00000462613 TRAV12-3A0A0B4J271 114 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 A0A0J9YWU9 116 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 GGTLC3B5MD39 225 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 C11orf94C9JXX5 98 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 RGS13O14921 159 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 PDE6DO43924 150 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 PRB4P10163 310 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-206ENST00000462613 HTN1P15515 57 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 CRISP2P16562 243 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 RNASE4P34096 147 aaKnown RBP4.64□□□□□ -1.67
SF3B1-206ENST00000462613 TAS2R60P59551 318 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 RAB14P61106 215 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 MEF2BQ02080 365 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-206ENST00000462613 SMUG1Q53HV7 270 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 GFI1BQ5VTD9 330 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 FAM159AQ6UWV7 190 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 ZNF705AQ6ZN79 300 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-206ENST00000462613 ZNF493Q6ZR52 646 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 PRNTQ86SH4 94 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 TMEM75Q8N9X5 138 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 CSNK1G2-AS1Q8NCQ2 148 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 Q8TAT8 98 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 C16orf74Q96GX8 76 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 FMC1Q96HJ9 113 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 PSG8Q9UQ74 426 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 BOLA1Q9Y3E2 137 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 YTHDF2Q9Y5A9 579 aaKnown RBP4.64□□□□□ -1.67
SF3B1-206ENST00000462613 TGP01266 2768 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 NBEAL2Q6ZNJ1 2754 aa4.64□□□□□ -1.67
SF3B1-206ENST00000462613 TRAV8-1A0A0A6YYK1 113 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 TRAV21A0A0B4J279 112 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 IGHV4-28A0A0C4DH34 117 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 LOC102723971A0A1B0GUV8 181 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 CXorf65A6NEN9 183 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 CBY3A6NI87 242 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 SNURFLB1AK76 121 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 KLLNB2CW77 178 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 CRXO43186 299 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-206ENST00000462613 GIG44P09565 113 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-206ENST00000462613 SPART-AS1P0CW21 52 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 BCL2P10415 239 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 ATP5G3P48201 142 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 PMS2P11Q13670 270 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms