RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 ATP5SQ99766 215 aa9.79□□□□□ -0.84
USP4-206ENST00000461553 MUC4Q99102 2169 aa9.79□□□□□ -0.84
USP4-206ENST00000461553 A0A1B0GVY2 172 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 GAGE12BA1L429 117 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 H0YIZ8 118 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 GAGE7O76087 117 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 GAGE12FP0CL80 117 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 GAGE12GP0CL81 117 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 GAGE12IP0CL82 117 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 CCL18P55774 89 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 H2BFSP57053 126 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 ERCC8Q13216 396 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 ICAM4Q14773 271 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 FAM122CQ6P4D5 195 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 LINC00612Q8N6U2 182 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 LINC00477Q96M19 166 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 MARVELD1Q9BSK0 173 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 OR51M1Q9H341 326 aa9.78□□□□□ -0.84
USP4-206ENST00000461553 IGKV2-40A0A087WW87 121 aaPredicted RBP9.77□□□□□ -0.85
USP4-206ENST00000461553 KLLNB2CW77 178 aa9.77□□□□□ -0.85
USP4-206ENST00000461553 OR7C2O60412 319 aa9.77□□□□□ -0.85
USP4-206ENST00000461553 IGKV2D-40P01614 121 aaPredicted RBP9.77□□□□□ -0.85
USP4-206ENST00000461553 BTN1A1Q13410 526 aa9.77□□□□□ -0.85
USP4-206ENST00000461553 OR5I1Q13606 314 aa9.77□□□□□ -0.85
USP4-206ENST00000461553 TMEM78Q5T7P6 136 aa9.77□□□□□ -0.85
USP4-206ENST00000461553 C1orf134Q5TEV5 83 aa9.77□□□□□ -0.85
USP4-206ENST00000461553 GNPNAT1Q96EK6 184 aaPredicted RBP9.77□□□□□ -0.85
USP4-206ENST00000461553 FAM167A-AS1Q96KT0 104 aa9.77□□□□□ -0.85
USP4-206ENST00000461553 PAXXQ9BUH6 204 aa9.77□□□□□ -0.85
USP4-206ENST00000461553 FUT9Q9Y231 359 aa9.77□□□□□ -0.85
USP4-206ENST00000461553 HSPB11Q9Y547 144 aa9.77□□□□□ -0.85
USP4-206ENST00000461553 TRAV26-1A0A087WT03 109 aa9.76□□□□□ -0.85
USP4-206ENST00000461553 MPC2O95563 127 aa9.76□□□□□ -0.85
USP4-206ENST00000461553 OR10J4P0C629 311 aa9.76□□□□□ -0.85
USP4-206ENST00000461553 NBEAP1P0C6P0 100 aa9.76□□□□□ -0.85
USP4-206ENST00000461553 M6PRP20645 277 aa9.76□□□□□ -0.85
USP4-206ENST00000461553 UBE2L3P68036 154 aaKnown RBP9.76□□□□□ -0.85
USP4-206ENST00000461553 C9orf47Q6ZRZ4 202 aa9.76□□□□□ -0.85
USP4-206ENST00000461553 PHYHIPLQ96FC7 376 aa9.76□□□□□ -0.85
USP4-206ENST00000461553 IFNA5P01569 189 aa9.75□□□□□ -0.85
USP4-206ENST00000461553 GPX1P07203 203 aa9.75□□□□□ -0.85
USP4-206ENST00000461553 CRISP2P16562 243 aa9.75□□□□□ -0.85
USP4-206ENST00000461553 RNASE4P34096 147 aaKnown RBP9.75□□□□□ -0.85
USP4-206ENST00000461553 CSN1S1P47710 185 aa9.75□□□□□ -0.85
USP4-206ENST00000461553 DAZ2Q13117 558 aaKnown RBP9.75□□□□□ -0.85
USP4-206ENST00000461553 KHDC3LQ587J8 217 aa9.75□□□□□ -0.85
USP4-206ENST00000461553 FFAR4Q5NUL3 377 aa9.75□□□□□ -0.85
USP4-206ENST00000461553 EIF4E3Q8N5X7 224 aaKnown RBP9.75□□□□□ -0.85
USP4-206ENST00000461553 ZNRF2Q8NHG8 242 aa9.75□□□□□ -0.85
USP4-206ENST00000461553 FXYD5Q96DB9 178 aa9.75□□□□□ -0.85
USP4-206ENST00000461553 FAM19A4Q96LR4 140 aa9.75□□□□□ -0.85
USP4-206ENST00000461553 AGPAT4-IT1Q9H0P7 198 aa9.75□□□□□ -0.85
USP4-206ENST00000461553 TMPRSS5Q9H3S3 457 aa9.75□□□□□ -0.85
USP4-206ENST00000461553 MBD2Q9UBB5 411 aa9.75□□□□□ -0.85
USP4-206ENST00000461553 TRGV2A0A075B6R0 118 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 A0A0J9YY99 117 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 NBDYA0A0U1RRE5 68 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 RGS13O14921 159 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 RPL12P30050 165 aaKnown RBP9.74□□□□□ -0.85
USP4-206ENST00000461553 TAS2R45P59539 299 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 CD300CQ08708 224 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 ANXA2RQ3ZCQ2 193 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 Q6ZTI0 123 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 SCGB1C1Q8TD33 95 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 RXFP4Q8TDU9 374 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 ZNF503Q96F45 646 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 ARPC5LQ9BPX5 153 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 LINC00467Q9BRT7 94 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 SMIM3Q9BZL3 60 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 GSN-AS1Q9NRJ2 163 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 LINC00588Q9Y4M8 146 aa9.74□□□□□ -0.85
USP4-206ENST00000461553 TRGV1A0A0A0MS02 117 aa9.73□□□□□ -0.85
USP4-206ENST00000461553 NMBP08949 121 aa9.73□□□□□ -0.85
USP4-206ENST00000461553 HOXA5P20719 270 aa9.73□□□□□ -0.85
USP4-206ENST00000461553 SSX7Q7RTT5 188 aa9.73□□□□□ -0.85
USP4-206ENST00000461553 C11orf72Q8NBR9 251 aa9.73□□□□□ -0.85
USP4-206ENST00000461553 Q8TAT8 98 aa9.73□□□□□ -0.85
USP4-206ENST00000461553 VGLL1Q99990 258 aa9.73□□□□□ -0.85
USP4-206ENST00000461553 ZNF492Q9P255 531 aa9.73□□□□□ -0.85
USP4-206ENST00000461553 H3BNG1 76 aa9.72□□□□□ -0.85
USP4-206ENST00000461553 ZNF324O75467 553 aaPredicted RBP9.72□□□□□ -0.85
USP4-206ENST00000461553 ZNF138P52744 262 aa9.72□□□□□ -0.85
USP4-206ENST00000461553 TCL1AP56279 114 aa9.72□□□□□ -0.85
USP4-206ENST00000461553 IBA57Q5T440 356 aaKnown RBP9.72□□□□□ -0.85
USP4-206ENST00000461553 PRR9Q5T870 116 aa9.72□□□□□ -0.85
USP4-206ENST00000461553 LYPD1Q8N2G4 141 aa9.72□□□□□ -0.85
USP4-206ENST00000461553 ZFAND2AQ8N6M9 145 aa9.72□□□□□ -0.85
USP4-206ENST00000461553 Q9H3A6 140 aa9.72□□□□□ -0.85
USP4-206ENST00000461553 IGHV1OR15-1A0A075B7D0 117 aa9.71□□□□□ -0.86
USP4-206ENST00000461553 TRBV7-9A0A0J9YWB2 115 aa9.71□□□□□ -0.86
USP4-206ENST00000461553 RBAKDNA6NC62 111 aa9.71□□□□□ -0.86
USP4-206ENST00000461553 RANP62826 216 aaKnown RBP9.71□□□□□ -0.86
USP4-206ENST00000461553 TTC32Q5I0X7 151 aa9.71□□□□□ -0.86
USP4-206ENST00000461553 C6orf223Q8N319 242 aa9.71□□□□□ -0.86
USP4-206ENST00000461553 C18orf15Q96N68 181 aa9.71□□□□□ -0.86
USP4-206ENST00000461553 RYR1P21817 5038 aa9.7□□□□□ -0.86
USP4-206ENST00000461553 MED14OSP0DP75 135 aa9.7□□□□□ -0.86
USP4-206ENST00000461553 ZNF415Q09FC8 603 aa9.7□□□□□ -0.86
USP4-206ENST00000461553 BATF3Q9NR55 127 aa9.7□□□□□ -0.86
USP4-206ENST00000461553 PCLOQ9Y6V0 5065 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms