RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 TENM3Q9P273 2699 aa8.21□□□□□ -1.1
SSBP1-202ENST00000461433 M0R2Z0 102 aa8.21□□□□□ -1.1
SSBP1-202ENST00000461433 TCRAP04437 139 aa8.21□□□□□ -1.1
SSBP1-202ENST00000461433 KIR3DS1Q14943 382 aa8.21□□□□□ -1.1
SSBP1-202ENST00000461433 SPINK13Q1W4C9 94 aa8.21□□□□□ -1.1
SSBP1-202ENST00000461433 GOLT1AQ6ZVE7 132 aa8.21□□□□□ -1.1
SSBP1-202ENST00000461433 ODF3Q96PU9 254 aa8.21□□□□□ -1.1
SSBP1-202ENST00000461433 SPATA25Q9BR10 227 aa8.21□□□□□ -1.1
SSBP1-202ENST00000461433 TP53TG1Q9Y2A0 90 aa8.21□□□□□ -1.1
SSBP1-202ENST00000461433 HUWE1Q7Z6Z7 4374 aaKnown RBP8.2□□□□□ -1.1
SSBP1-202ENST00000461433 SPRY2O43597 315 aa8.2□□□□□ -1.1
SSBP1-202ENST00000461433 HBE1P02100 147 aa8.2□□□□□ -1.1
SSBP1-202ENST00000461433 ATP5G3P48201 142 aa8.2□□□□□ -1.1
SSBP1-202ENST00000461433 BLOC1S1P78537 153 aa8.2□□□□□ -1.1
SSBP1-202ENST00000461433 PMS2P11Q13670 270 aa8.2□□□□□ -1.1
SSBP1-202ENST00000461433 FAM210AQ96ND0 272 aa8.2□□□□□ -1.1
SSBP1-202ENST00000461433 C1QTNF4Q9BXJ3 329 aa8.2□□□□□ -1.1
SSBP1-202ENST00000461433 NKX6-2Q9C056 277 aaPredicted RBP8.2□□□□□ -1.1
SSBP1-202ENST00000461433 PPP1R14DQ9NXH3 145 aa8.2□□□□□ -1.1
SSBP1-202ENST00000461433 ZNF492Q9P255 531 aa8.2□□□□□ -1.1
SSBP1-202ENST00000461433 RPH3ALQ9UNE2 315 aa8.2□□□□□ -1.1
SSBP1-202ENST00000461433 TRAV12-2A0A075B6T6 113 aa8.19□□□□□ -1.1
SSBP1-202ENST00000461433 TRAV8-1A0A0A6YYK1 113 aa8.19□□□□□ -1.1
SSBP1-202ENST00000461433 IGLV2-11P01706 119 aa8.19□□□□□ -1.1
SSBP1-202ENST00000461433 PPT1P50897 306 aa8.19□□□□□ -1.1
SSBP1-202ENST00000461433 CST9LP1Q5W188 147 aa8.19□□□□□ -1.1
SSBP1-202ENST00000461433 C1orf158Q8N1D5 194 aa8.19□□□□□ -1.1
SSBP1-202ENST00000461433 Q8TAT8 98 aa8.19□□□□□ -1.1
SSBP1-202ENST00000461433 RCHY1Q96PM5 261 aa8.19□□□□□ -1.1
SSBP1-202ENST00000461433 ZMAT4Q9H898 229 aa8.19□□□□□ -1.1
SSBP1-202ENST00000461433 GNG13Q9P2W3 67 aa8.19□□□□□ -1.1
SSBP1-202ENST00000461433 TGP01266 2768 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 TEX46H3BTG2 121 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 RBMY1A1P0DJD3 496 aaKnown RBP8.18□□□□□ -1.1
SSBP1-202ENST00000461433 RBMY1CP0DJD4 496 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 CDKN1BP46527 198 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 ZNF138P52744 262 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 RBMY1FQ15415 496 aaKnown RBP8.18□□□□□ -1.1
SSBP1-202ENST00000461433 TMEM78Q5T7P6 136 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 ZNF705AQ6ZN79 300 aaPredicted RBP8.18□□□□□ -1.1
SSBP1-202ENST00000461433 TVP23CQ96ET8 276 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 SGK494Q96LW2 274 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 IGF2BP2-AS1Q96M15 143 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 LINC00479Q96M42 142 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 ATG101Q9BSB4 218 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 SERTM2A0A1B0GWG4 89 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 KLLNB2CW77 178 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 IFNA7P01567 189 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 AMBPP02760 352 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 CRISP2P16562 243 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 ZFAND2AQ8N6M9 145 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 CYB561D1Q8N8Q1 229 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 PCNPQ8WW12 178 aaKnown RBP8.18□□□□□ -1.1
SSBP1-202ENST00000461433 MANBALQ9NQG1 85 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 X6R8D5 127 aa8.18□□□□□ -1.1
SSBP1-202ENST00000461433 TRBV7-9A0A0J9YWB2 115 aa8.17□□□□□ -1.1
SSBP1-202ENST00000461433 C11orf94C9JXX5 98 aa8.17□□□□□ -1.1
SSBP1-202ENST00000461433 PEX7O00628 323 aa8.17□□□□□ -1.1
SSBP1-202ENST00000461433 TSPOP30536 169 aa8.17□□□□□ -1.1
SSBP1-202ENST00000461433 LEPP41159 167 aa8.17□□□□□ -1.1
SSBP1-202ENST00000461433 IFITM2Q01629 132 aa8.17□□□□□ -1.1
SSBP1-202ENST00000461433 PRR9Q5T870 116 aa8.17□□□□□ -1.1
SSBP1-202ENST00000461433 GFI1BQ5VTD9 330 aa8.17□□□□□ -1.1
SSBP1-202ENST00000461433 OR11H2Q8NH07 326 aa8.17□□□□□ -1.1
SSBP1-202ENST00000461433 HIST1H2BAQ96A08 127 aa8.17□□□□□ -1.1
SSBP1-202ENST00000461433 TCEAL7Q9BRU2 100 aa8.17□□□□□ -1.1
SSBP1-202ENST00000461433 LENEPQ9Y5L5 61 aa8.17□□□□□ -1.1
SSBP1-202ENST00000461433 U3KQK5 164 aa8.17□□□□□ -1.1
SSBP1-202ENST00000461433 TRAV34A0A0B4J273 112 aa8.16□□□□□ -1.1
SSBP1-202ENST00000461433 NMBP08949 121 aa8.16□□□□□ -1.1
SSBP1-202ENST00000461433 TMEM75Q8N9X5 138 aa8.16□□□□□ -1.1
SSBP1-202ENST00000461433 RARRES2Q99969 163 aa8.16□□□□□ -1.1
SSBP1-202ENST00000461433 PSG8Q9UQ74 426 aa8.16□□□□□ -1.1
SSBP1-202ENST00000461433 KLF12Q9Y4X4 402 aa8.16□□□□□ -1.1
SSBP1-202ENST00000461433 SCO2A0A1W2PP80 73 aa8.15□□□□□ -1.1
SSBP1-202ENST00000461433 J3KRW8 73 aa8.15□□□□□ -1.1
SSBP1-202ENST00000461433 K7EQM0 130 aa8.15□□□□□ -1.1
SSBP1-202ENST00000461433 ZNF324O75467 553 aaPredicted RBP8.15□□□□□ -1.1
SSBP1-202ENST00000461433 INSP01308 110 aa8.15□□□□□ -1.1
SSBP1-202ENST00000461433 BCL2P10415 239 aa8.15□□□□□ -1.1
SSBP1-202ENST00000461433 FLI1Q01543 452 aaPredicted RBP8.15□□□□□ -1.1
SSBP1-202ENST00000461433 Q6ZQT7 251 aa8.15□□□□□ -1.1
SSBP1-202ENST00000461433 C2CD4CQ8TF44 421 aa8.15□□□□□ -1.1
SSBP1-202ENST00000461433 TRAV12-3A0A0B4J271 114 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 LOC102723971A0A1B0GUV8 181 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 PRM2P04554 102 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 RNASE4P34096 147 aaKnown RBP8.14□□□□□ -1.11
SSBP1-202ENST00000461433 MEF2BQ02080 365 aaPredicted RBP8.14□□□□□ -1.11
SSBP1-202ENST00000461433 BTN1A1Q13410 526 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 Q8NAQ8 132 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 NEU1Q99519 415 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 TXNDC17Q9BRA2 123 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 VAX2Q9UIW0 290 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 GOLT1BQ9Y3E0 138 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 IGHV3OR16-12A0A075B7B8 117 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 C7orf71A4D174 169 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 FBLL1A6NHQ2 334 aaKnown RBP8.14□□□□□ -1.11
SSBP1-202ENST00000461433 F6UZH7 168 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 IFNA1P01562 189 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 GPX1P07203 203 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms