RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 LINC00588Q9Y4M8 146 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 NACAE9PAV3 2078 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 RYR1P21817 5038 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 TRAV26-1A0A087WT03 109 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 C16orf90A8MZG2 172 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 PRAC2D3DTV9 90 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 H3BTX0 84 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 PLA2G10O15496 165 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 MPDU1O75352 247 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 TCRBP04435 133 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 PRB4P10163 310 aaPredicted RBP6.06□□□□□ -1.44
HDAC9-220ENST00000461409 S100A11P31949 105 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 RPL29P47914 159 aaKnown RBP6.06□□□□□ -1.44
HDAC9-220ENST00000461409 SULT1A1P50225 295 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 OR5I1Q13606 314 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 VWC2Q2TAL6 325 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 MIC13Q5XKP0 118 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 SSX7Q7RTT5 188 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 ZNF575Q86XF7 245 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 LINC00612Q8N6U2 182 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 RXFP4Q8TDU9 374 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 SAT2Q96F10 170 aaPredicted RBP6.06□□□□□ -1.44
HDAC9-220ENST00000461409 C2orf50Q96LR7 162 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 PYGO2Q9BRQ0 406 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 SLC39A9Q9NUM3 307 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 DNAH11Q96DT5 4516 aa6.06□□□□□ -1.44
HDAC9-220ENST00000461409 TRAV6A0A075B6T7 132 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 TRAV12-3A0A0B4J271 114 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 UBE2L5PA0A1B0GUS4 154 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 GAGE12BA1L429 117 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 H3BNG1 76 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 GAGE7O76087 117 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 SLC25A5P05141 298 aaKnown RBP6.05□□□□□ -1.44
HDAC9-220ENST00000461409 GAGE12FP0CL80 117 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 GAGE12GP0CL81 117 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 GAGE12IP0CL82 117 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 CT45A10P0DMU9 189 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 S100A10P60903 97 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 BAXQ07812 192 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 DAZ2Q13117 558 aaKnown RBP6.05□□□□□ -1.44
HDAC9-220ENST00000461409 PDE6HQ13956 83 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 ZNF680Q8NEM1 530 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 CHAC2Q8WUX2 184 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 PARD6GQ9BYG4 376 aaPredicted RBP6.05□□□□□ -1.44
HDAC9-220ENST00000461409 LYRM2Q9NU23 88 aaPredicted RBP6.05□□□□□ -1.44
HDAC9-220ENST00000461409 NDUFA13Q9P0J0 144 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 TMEM14CQ9P0S9 112 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 PRELID1Q9Y255 219 aa6.05□□□□□ -1.44
HDAC9-220ENST00000461409 TRBV19A0A075B6N1 114 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 TRAV5A0A0B4J249 113 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 IGSF23A1L1A6 192 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 C7orf71A4D174 169 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 FAM24AA6NFZ4 105 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 J3KRW8 73 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 HIST1H1EP10412 219 aaKnown RBP6.04□□□□□ -1.44
HDAC9-220ENST00000461409 FGF7P21781 194 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 ATP6V1FQ16864 119 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 TMEM252Q8N6L7 170 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 SEC22CQ9BRL7 303 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 UPK3BQ9BT76 320 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 CCDC32Q9BV29 185 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 Q9H3A6 140 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 C11orf1Q9H5F2 150 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 AAMDCQ9H7C9 122 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 Q9H8V8 135 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 ZNF586Q9NXT0 402 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 TIMM9Q9Y5J7 89 aa6.04□□□□□ -1.44
HDAC9-220ENST00000461409 MUC4Q99102 2169 aa6.03□□□□□ -1.44
HDAC9-220ENST00000461409 TRGV2A0A075B6R0 118 aa6.03□□□□□ -1.44
HDAC9-220ENST00000461409 A0A0J9YY99 117 aa6.03□□□□□ -1.44
HDAC9-220ENST00000461409 FAM240BA0A1B0GVZ2 78 aa6.03□□□□□ -1.44
HDAC9-220ENST00000461409 A0A1W2PPQ1 181 aa6.03□□□□□ -1.44
HDAC9-220ENST00000461409 KLLNB2CW77 178 aa6.03□□□□□ -1.44
HDAC9-220ENST00000461409 CDK2AP2O75956 126 aa6.03□□□□□ -1.44
HDAC9-220ENST00000461409 BTF3P20290 206 aaKnown RBP6.03□□□□□ -1.44
HDAC9-220ENST00000461409 RAB32Q13637 225 aa6.03□□□□□ -1.44
HDAC9-220ENST00000461409 MZT2BQ6NZ67 158 aa6.03□□□□□ -1.44
HDAC9-220ENST00000461409 Q6ZTI0 123 aa6.03□□□□□ -1.44
HDAC9-220ENST00000461409 LINC00477Q96M19 166 aa6.03□□□□□ -1.44
HDAC9-220ENST00000461409 C18orf15Q96N68 181 aa6.03□□□□□ -1.44
HDAC9-220ENST00000461409 LINC00467Q9BRT7 94 aa6.03□□□□□ -1.44
HDAC9-220ENST00000461409 GPN1Q9HCN4 374 aaPredicted RBP6.03□□□□□ -1.44
HDAC9-220ENST00000461409 KCNIP2Q9NS61 270 aa6.03□□□□□ -1.44
HDAC9-220ENST00000461409 MRPS16Q9Y3D3 137 aaKnown RBP6.03□□□□□ -1.44
HDAC9-220ENST00000461409 DYNC1H1Q14204 4646 aaKnown RBP6.02□□□□□ -1.45
HDAC9-220ENST00000461409 M0R3E3 92 aa6.02□□□□□ -1.45
HDAC9-220ENST00000461409 NDUFB4O95168 129 aa6.02□□□□□ -1.45
HDAC9-220ENST00000461409 NMBP08949 121 aa6.02□□□□□ -1.45
HDAC9-220ENST00000461409 ANXA2RQ3ZCQ2 193 aa6.02□□□□□ -1.45
HDAC9-220ENST00000461409 TMEM78Q5T7P6 136 aa6.02□□□□□ -1.45
HDAC9-220ENST00000461409 NPCDR1Q9BY65 106 aa6.02□□□□□ -1.45
HDAC9-220ENST00000461409 GSN-AS1Q9NRJ2 163 aa6.02□□□□□ -1.45
HDAC9-220ENST00000461409 TRGV1A0A0A0MS02 117 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 GPX1P07203 203 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 PYYP10082 97 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 CRISP2P16562 243 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 RNASE4P34096 147 aaKnown RBP6.01□□□□□ -1.45
HDAC9-220ENST00000461409 ERCC8Q13216 396 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 IL15RAQ13261 267 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 ESRGQ1W209 222 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms