RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 CD5LO43866 347 aa12.97□□□□□ -0.33
LSS-205ENST00000457828 DLX6P56179 175 aa12.97□□□□□ -0.33
LSS-205ENST00000457828 NSUN5P1Q3KNT7 163 aa12.97□□□□□ -0.33
LSS-205ENST00000457828 JKAMPQ9P055 326 aa12.97□□□□□ -0.33
LSS-205ENST00000457828 MRPL36Q9P0J6 103 aaKnown RBP12.97□□□□□ -0.33
LSS-205ENST00000457828 BVES-AS1Q5T3Y7 98 aa12.96□□□□□ -0.33
LSS-205ENST00000457828 COL5A1P20908 1838 aaPredicted RBP12.96□□□□□ -0.34
LSS-205ENST00000457828 LOC107984156A0A0G2JMH3 177 aa12.95□□□□□ -0.34
LSS-205ENST00000457828 PSMB11A5LHX3 300 aa12.95□□□□□ -0.34
LSS-205ENST00000457828 IGLV2-8P01709 118 aa12.95□□□□□ -0.34
LSS-205ENST00000457828 ARL17AQ8IVW1 177 aa12.95□□□□□ -0.34
LSS-205ENST00000457828 WIPF2Q8TF74 440 aaPredicted RBP12.95□□□□□ -0.34
LSS-205ENST00000457828 PVRIGQ6DKI7 326 aa12.95□□□□□ -0.34
LSS-205ENST00000457828 FAM231BA6NCW3 169 aa12.95□□□□□ -0.34
LSS-205ENST00000457828 DTX2Q86UW9 622 aa12.95□□□□□ -0.34
LSS-205ENST00000457828 KIR3DS1Q14943 382 aa12.94□□□□□ -0.34
LSS-205ENST00000457828 ZC2HC1AQ96GY0 325 aa12.94□□□□□ -0.34
LSS-205ENST00000457828 ZNF492Q9P255 531 aa12.94□□□□□ -0.34
LSS-205ENST00000457828 HSD52Q0P140 79 aa12.94□□□□□ -0.34
LSS-205ENST00000457828 PSG3Q16557 428 aa12.94□□□□□ -0.34
LSS-205ENST00000457828 IGHV3OR16-12A0A075B7B8 117 aa12.94□□□□□ -0.34
LSS-205ENST00000457828 CT83Q5H943 113 aa12.94□□□□□ -0.34
LSS-205ENST00000457828 C17orf77Q96MU5 243 aa12.94□□□□□ -0.34
LSS-205ENST00000457828 IGKV3-20P01619 116 aa12.93□□□□□ -0.34
LSS-205ENST00000457828 KLF5Q13887 457 aaPredicted RBP12.93□□□□□ -0.34
LSS-205ENST00000457828 GDF5OSQ5U4N7 250 aa12.93□□□□□ -0.34
LSS-205ENST00000457828 C10orf105Q8TEF2 133 aa12.93□□□□□ -0.34
LSS-205ENST00000457828 GFRA4Q9GZZ7 299 aa12.93□□□□□ -0.34
LSS-205ENST00000457828 CFAP54Q96N23 3096 aa12.93□□□□□ -0.34
LSS-205ENST00000457828 Q1RN00 199 aa12.93□□□□□ -0.34
LSS-205ENST00000457828 SFTA2Q6UW10 78 aa12.93□□□□□ -0.34
LSS-205ENST00000457828 PRSS57Q6UWY2 283 aa12.93□□□□□ -0.34
LSS-205ENST00000457828 C8orf49Q96NF6 230 aa12.93□□□□□ -0.34
LSS-205ENST00000457828 RNF5Q99942 180 aa12.93□□□□□ -0.34
LSS-205ENST00000457828 NCOR1P1Q9H4R4 102 aa12.93□□□□□ -0.34
LSS-205ENST00000457828 LHBP01229 141 aa12.93□□□□□ -0.34
LSS-205ENST00000457828 VCANP13611 3396 aa12.93□□□□□ -0.34
LSS-205ENST00000457828 COL4A2P08572 1712 aa12.93□□□□□ -0.34
LSS-205ENST00000457828 SH2D1AO60880 128 aa12.92□□□□□ -0.34
LSS-205ENST00000457828 NDUFA3O95167 84 aa12.92□□□□□ -0.34
LSS-205ENST00000457828 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.92□□□□□ -0.34
LSS-205ENST00000457828 GTSF1Q8WW33 167 aa12.92□□□□□ -0.34
LSS-205ENST00000457828 M0R381 172 aa12.92□□□□□ -0.34
LSS-205ENST00000457828 GTSCR1Q86UQ5 136 aa12.92□□□□□ -0.34
LSS-205ENST00000457828 FABP5P3A8MUU1 101 aa12.92□□□□□ -0.34
LSS-205ENST00000457828 C15orf32Q32M92 178 aa12.92□□□□□ -0.34
LSS-205ENST00000457828 BCL6BQ8N143 479 aaPredicted RBP12.92□□□□□ -0.34
LSS-205ENST00000457828 OR10J6PQ8NGY7 276 aa12.92□□□□□ -0.34
LSS-205ENST00000457828 RITA1Q96K30 269 aa12.92□□□□□ -0.34
LSS-205ENST00000457828 ARL6IP6Q8N6S5 226 aa12.91□□□□□ -0.34
LSS-205ENST00000457828 J3QLI3 93 aa12.91□□□□□ -0.34
LSS-205ENST00000457828 THAP8Q8NA92 274 aa12.91□□□□□ -0.34
LSS-205ENST00000457828 OR11H12B2RN74 326 aa12.91□□□□□ -0.34
LSS-205ENST00000457828 H3BVH4 76 aa12.91□□□□□ -0.34
LSS-205ENST00000457828 NDUFB8O95169 186 aa12.91□□□□□ -0.34
LSS-205ENST00000457828 RAB9AP51151 201 aa12.91□□□□□ -0.34
LSS-205ENST00000457828 OR11H1Q8NG94 326 aa12.91□□□□□ -0.34
LSS-205ENST00000457828 OR11H2Q8NH07 326 aa12.91□□□□□ -0.34
LSS-205ENST00000457828 DYSFO75923 2080 aa12.91□□□□□ -0.34
LSS-205ENST00000457828 CDSNQ15517 529 aa12.9□□□□□ -0.34
LSS-205ENST00000457828 TTC9CQ8N5M4 171 aa12.9□□□□□ -0.34
LSS-205ENST00000457828 LTAP01374 205 aa12.9□□□□□ -0.34
LSS-205ENST00000457828 SAMD5Q5TGI4 173 aa12.9□□□□□ -0.34
LSS-205ENST00000457828 NCKAP5O14513 1909 aa12.9□□□□□ -0.34
LSS-205ENST00000457828 C2orf70A6NJV1 201 aa12.9□□□□□ -0.34
LSS-205ENST00000457828 CTRLP40313 264 aa12.9□□□□□ -0.34
LSS-205ENST00000457828 C3orf56Q8N813 242 aa12.9□□□□□ -0.34
LSS-205ENST00000457828 OR9G4Q8NGQ1 327 aa12.9□□□□□ -0.34
LSS-205ENST00000457828 C1orf159Q96HA4 380 aa12.9□□□□□ -0.34
LSS-205ENST00000457828 TRBV19A0A075B6N1 114 aa12.9□□□□□ -0.35
LSS-205ENST00000457828 COX8AP10176 69 aa12.9□□□□□ -0.35
LSS-205ENST00000457828 SHANK2-AS3Q9BTD1 123 aa12.9□□□□□ -0.35
LSS-205ENST00000457828 ACANP16112 2415 aa12.89□□□□□ -0.35
LSS-205ENST00000457828 IGLC1P0CG04 106 aa12.89□□□□□ -0.35
LSS-205ENST00000457828 LINC00322Q6ZN03 302 aaPredicted RBP12.89□□□□□ -0.35
LSS-205ENST00000457828 SZT2Q5T011 3432 aa12.89□□□□□ -0.35
LSS-205ENST00000457828 FN1P02751 2386 aaKnown RBP12.89□□□□□ -0.35
LSS-205ENST00000457828 CIDEAO60543 219 aa12.89□□□□□ -0.35
LSS-205ENST00000457828 PAX1P15863 534 aa12.89□□□□□ -0.35
LSS-205ENST00000457828 SNRPD3P62318 126 aaKnown RBP12.89□□□□□ -0.35
LSS-205ENST00000457828 PHLDA3Q9Y5J5 127 aa12.89□□□□□ -0.35
LSS-205ENST00000457828 IGFBPL1Q8WX77 278 aa12.88□□□□□ -0.35
LSS-205ENST00000457828 SPEGQ15772 3267 aa12.88□□□□□ -0.35
LSS-205ENST00000457828 DEFB125Q8N687 156 aa12.88□□□□□ -0.35
LSS-205ENST00000457828 ZNF747Q9BV97 191 aa12.88□□□□□ -0.35
LSS-205ENST00000457828 SIGLEC8Q9NYZ4 499 aa12.88□□□□□ -0.35
LSS-205ENST00000457828 ATP5LO75964 103 aa12.88□□□□□ -0.35
LSS-205ENST00000457828 FAM120AOSQ5T036 256 aa12.88□□□□□ -0.35
LSS-205ENST00000457828 CGB3P0DN86 165 aa12.87□□□□□ -0.35
LSS-205ENST00000457828 CGB7P0DN87 165 aa12.87□□□□□ -0.35
LSS-205ENST00000457828 ZC2HC1BQ5TFG8 222 aa12.87□□□□□ -0.35
LSS-205ENST00000457828 DPM2O94777 84 aa12.87□□□□□ -0.35
LSS-205ENST00000457828 IGKCP01834 107 aa12.87□□□□□ -0.35
LSS-205ENST00000457828 PSMB2P49721 201 aa12.87□□□□□ -0.35
LSS-205ENST00000457828 LAMA1P25391 3075 aa12.87□□□□□ -0.35
LSS-205ENST00000457828 FAM104BQ5XKR9 115 aa12.87□□□□□ -0.35
LSS-205ENST00000457828 FAM71F2Q6NXP2 309 aa12.87□□□□□ -0.35
LSS-205ENST00000457828 NXT2Q9NPJ8 142 aaKnown RBP12.87□□□□□ -0.35
LSS-205ENST00000457828 HECTD1Q9ULT8 2610 aa12.86□□□□□ -0.35
LSS-205ENST00000457828 H7C2G1 150 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms