RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 UBE2D1P51668 147 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 EMP1P54849 157 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 PRCDQ00LT1 54 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 POU2AF1Q16633 256 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 PMS2CLQ68D20 193 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 PIP4P1Q86T03 277 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 FER1L6-AS2Q96M78 137 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 CITED1Q99966 193 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 TPPP3Q9BW30 176 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 KLK5Q9Y337 293 aaPredicted RBP3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 TRGV8A0A0C4DH27 118 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 F8W735 103 aaPredicted RBP3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 TRGV3P03979 118 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 IGF1P05019 195 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 CRYGCP07315 174 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 ATP5J2P56134 94 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 CATR1Q13166 79 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 LGALS9BQ3B8N2 356 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 TCTEX1D4Q5JR98 221 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 LGALS9CQ6DKI2 356 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 LYZL1Q6UWQ5 148 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 YAF2Q8IY57 180 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 CHCHD1Q96BP2 118 aaKnown RBP3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 PAXXQ9BUH6 204 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 PROCRQ9UNN8 238 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 FOXA2Q9Y261 457 aaPredicted RBP3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 A0A1B0GUT8 65 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 SRRM5B3KS81 715 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 LAMTOR5O43504 91 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 OR5AL1P0C617 328 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 IGHV1-2P23083 117 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 TSPEAR-AS2P59090 65 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 MRPS21P82921 87 aaKnown RBP3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 SCGB2A2Q13296 93 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 ZNF48Q96MX3 618 aaPredicted RBP3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 KCNIP1Q9NZI2 227 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 TRAV26-2A0A0B4J265 109 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 LOC107984640A0A0U1RRK4 108 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 A0A1B0GWB2 263 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 PRAC2D3DTV9 90 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 HLA-DRB4P13762 266 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 PRDX2P32119 198 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 MEOX1P50221 254 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 SRSF6Q13247 344 aaKnown RBP3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 ODF3Q96PU9 254 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 TMEM133Q9H2Q1 129 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 HLA-DRB4X5D2U9 266 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 TMEM30CPA0ZSE6 113 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 TMEM8BA6NDV4 472 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 LINC01549A6NIU2 74 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 RASL11AQ6T310 242 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 WDR31Q8NA23 367 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 GRAMD2BQ96HH9 432 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 MAP1LC3CQ9BXW4 147 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 A0A1B0GV72 72 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 VSTM5A8MXK1 200 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 FTH1P19P0C7X4 201 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 COX6B1P14854 86 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 TAS2R45P59539 299 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 DHRS13Q6UX07 377 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 SIGLEC15Q6ZMC9 328 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 GTF2H5Q6ZYL4 71 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 Q86TA4 180 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 OR4A16Q8NH70 328 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 TMEM167BQ9NRX6 74 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 Q9UF83 564 aa3.51□□□□□ -1.85
DEPDC1-202ENST00000456315 hADV38S2A0JD32 116 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 HAX1O00165 279 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 UPK2O00526 184 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 CECR9P0C854 216 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 FAM104BQ5XKR9 115 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 PRSS3P2Q8NHM4 247 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 RASL10AQ92737 203 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 ADTRPQ96IZ2 230 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 RALYQ9UKM9 306 aaKnown RBP3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 OOEPA6NGQ2 149 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 OXTP01178 125 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 ZNF418Q8TF45 676 aaPredicted RBP3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 Q9H3A6 140 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 CALYQ9NYX4 217 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 CRYGDP07320 174 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 FABP2P12104 132 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 RRN3P1Q2M238 152 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 C2orf83Q53S99 150 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 C1orf122Q6ZSJ8 110 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 ATP5L2Q7Z4Y8 100 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 AMELXQ99217 191 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 MRPL20Q9BYC9 149 aaKnown RBP3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 DUX1O43812 170 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 UBE2D3P61077 147 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 UBE2D2P62837 147 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 ZNF493Q6ZR52 646 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 PRNTQ86SH4 94 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 S1PR3Q99500 378 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 SPRR3Q9UBC9 169 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 SIT1Q9Y3P8 196 aa3.5□□□□□ -1.85
DEPDC1-202ENST00000456315 P01737 135 aa3.49□□□□□ -1.85
DEPDC1-202ENST00000456315 SLC25A5P05141 298 aaKnown RBP3.49□□□□□ -1.85
DEPDC1-202ENST00000456315 ZNF22P17026 224 aaPredicted RBP3.49□□□□□ -1.85
DEPDC1-202ENST00000456315 PLEKHA3Q9HB20 300 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms