RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 GPX1P07203 203 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 SAA4P35542 130 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 FAM231DQ6ZW35 169 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 GRAMD2BQ96HH9 432 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 IGHV7-81A0A0B4J1V7 117 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 LTAP01374 205 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 EGR2P11161 476 aaPredicted RBP9.45□□□□□ -0.9
COL27A1-202ENST00000451716 HIST1H1AQ02539 215 aaPredicted RBP9.45□□□□□ -0.9
COL27A1-202ENST00000451716 C12orf54Q6X4T0 127 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 AJUBAQ96IF1 538 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 H3BRN7 92 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 M0R3E3 92 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 APCSP02743 223 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 C3orf79P0CE67 100 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 IGLL1P15814 213 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 BPIFA4PQ86YQ2 179 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 Q8N9W7 124 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 FMC1Q96HJ9 113 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 OTORQ9NRC9 128 aa9.45□□□□□ -0.9
COL27A1-202ENST00000451716 TRBV19A0A075B6N1 114 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 NPIPB5A8MRT5 1133 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 MT-ND6P03923 174 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 MFAP4P55083 255 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 MINOS1Q5TGZ0 78 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 LCN12Q6JVE5 192 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 TSKUQ8WUA8 353 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 TMUB1Q9BVT8 246 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 C21orf62Q9NYP8 219 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 TMEM14CQ9P0S9 112 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 MINOS1-NBL1R4GNA1 71 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 IGLV2-11P01706 119 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 ECSCRQ19T08 205 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 PIP4P2Q8N4L2 257 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 TTC9CQ8N5M4 171 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 ANAPC13Q9BS18 74 aa9.44□□□□□ -0.9
COL27A1-202ENST00000451716 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.44□□□□□ -0.91e-12■■□□□ 13.3
COL27A1-202ENST00000451716 LINC01548A6NM66 108 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 IGHV4-39P01824 125 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 HLA-DQA1P01909 254 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 HLA-DRB1P01911 266 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 PMCHP20382 165 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 Q0VG73 95 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 Q86TA4 180 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 OR2K2Q8NGT1 345 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 GTSF1Q8WW33 167 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 JMJD8Q96S16 334 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 TRAV9-2A0A087WT02 112 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 P01737 135 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 FAM106CPP0CH98 169 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 UBE2E1P51965 193 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 EBI3Q14213 229 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 PGLYRP4Q96LB8 373 aa9.43□□□□□ -0.9
COL27A1-202ENST00000451716 RPP21Q9H633 154 aaKnown RBP9.43□□□□□ -0.9
COL27A1-202ENST00000451716 POLQO75417 2590 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 WI2-2373I1.2A0A1W2PRP0 233 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 ATP5G2Q06055 141 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 SIGLEC15Q6ZMC9 328 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 OOSP1A8MZH6 123 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 J3QR89 54 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 FAM19A2Q8N3H0 131 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 ZNF414Q96IQ9 312 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 DOPEY1Q5JWR5 2465 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 C19orf71A6NCJ1 209 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 G3V318 75 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 H3BUT2 72 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 MRPS12O15235 138 aaKnown RBP9.42□□□□□ -0.9
COL27A1-202ENST00000451716 IGFL4Q6B9Z1 124 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 TMEM219Q86XT9 240 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 PIMREGQ9BSJ6 248 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 PRSS22Q9GZN4 317 aa9.42□□□□□ -0.9
COL27A1-202ENST00000451716 FAM208BQ5VWN6 2430 aa9.41□□□□□ -0.9
COL27A1-202ENST00000451716 ZNF785A8K8V0 405 aa9.41□□□□□ -0.9
COL27A1-202ENST00000451716 ATP6V0E1O15342 81 aa9.41□□□□□ -0.9
COL27A1-202ENST00000451716 CTSGP08311 255 aa9.41□□□□□ -0.9
COL27A1-202ENST00000451716 COL8A1P27658 744 aa9.41□□□□□ -0.9
COL27A1-202ENST00000451716 PMCHL1Q16048 86 aa9.41□□□□□ -0.9
COL27A1-202ENST00000451716 C1QTNF4Q9BXJ3 329 aa9.41□□□□□ -0.9
COL27A1-202ENST00000451716 A0A1W2PS18 150 aa9.41□□□□□ -0.9
COL27A1-202ENST00000451716 PTH2Q96A98 100 aa9.41□□□□□ -0.9
COL27A1-202ENST00000451716 ST20Q9HBF5 79 aa9.41□□□□□ -0.9
COL27A1-202ENST00000451716 CSPG4Q6UVK1 2322 aa9.4□□□□□ -0.9
COL27A1-202ENST00000451716 CENPVL3A0A0U1RRI6 287 aa9.4□□□□□ -0.9
COL27A1-202ENST00000451716 TMEM189A5PLL7 270 aa9.4□□□□□ -0.9
COL27A1-202ENST00000451716 OVOL3O00110 214 aa9.4□□□□□ -0.9
COL27A1-202ENST00000451716 GPR183P32249 361 aa9.4□□□□□ -0.9
COL27A1-202ENST00000451716 BRD3OSQ6XYD6 125 aa9.4□□□□□ -0.9
COL27A1-202ENST00000451716 CSDC2Q9Y534 153 aaKnown RBP9.4□□□□□ -0.9
COL27A1-202ENST00000451716 A8MWL6 223 aa9.4□□□□□ -0.91
COL27A1-202ENST00000451716 NPFFO15130 113 aa9.4□□□□□ -0.91
COL27A1-202ENST00000451716 SPINK8P0C7L1 97 aa9.4□□□□□ -0.91
COL27A1-202ENST00000451716 C15orf32Q32M92 178 aa9.4□□□□□ -0.91
COL27A1-202ENST00000451716 C18orf32Q8TCD1 76 aa9.4□□□□□ -0.91
COL27A1-202ENST00000451716 LINC00527Q9UJ94 153 aa9.4□□□□□ -0.91
COL27A1-202ENST00000451716 USP24Q9UPU5 2620 aa9.4□□□□□ -0.91
COL27A1-202ENST00000451716 NTF3P20783 257 aa9.39□□□□□ -0.91
COL27A1-202ENST00000451716 OR10J3Q5JRS4 329 aa9.39□□□□□ -0.91
COL27A1-202ENST00000451716 OR5A1Q8NGJ0 315 aa9.39□□□□□ -0.91
COL27A1-202ENST00000451716 WIPF2Q8TF74 440 aaPredicted RBP9.39□□□□□ -0.91
COL27A1-202ENST00000451716 C1RLQ9NZP8 487 aa9.39□□□□□ -0.91
COL27A1-202ENST00000451716 SOX21Q9Y651 276 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms