RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 LINC00467Q9BRT7 94 aa8.62□□□□□ -1.03
MSH5-209ENST00000450148 MRPL32Q9BYC8 188 aaKnown RBP8.62□□□□□ -1.03
MSH5-209ENST00000450148 OR51M1Q9H341 326 aa8.62□□□□□ -1.03
MSH5-209ENST00000450148 BATF3Q9NR55 127 aa8.62□□□□□ -1.03
MSH5-209ENST00000450148 HSPB11Q9Y547 144 aa8.62□□□□□ -1.03
MSH5-209ENST00000450148 TIMM9Q9Y5J7 89 aa8.62□□□□□ -1.03
MSH5-209ENST00000450148 MUC4Q99102 2169 aa8.62□□□□□ -1.03
MSH5-209ENST00000450148 HERC2O95714 4834 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 IGKV2-40A0A087WW87 121 aaPredicted RBP8.61□□□□□ -1.03
MSH5-209ENST00000450148 C7orf71A4D174 169 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 NUDT3O95989 172 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 IGKV2D-40P01614 121 aaPredicted RBP8.61□□□□□ -1.03
MSH5-209ENST00000450148 HOXA5P20719 270 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 DAZ2Q13117 558 aaKnown RBP8.61□□□□□ -1.03
MSH5-209ENST00000450148 BTN1A1Q13410 526 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 PRR9Q5T870 116 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 Q6ZQT7 251 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 CCDC28AQ8IWP9 274 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 ZFAND2AQ8N6M9 145 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 PHYHIPLQ96FC7 376 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 ATP5SQ99766 215 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 VGLL1Q99990 258 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 FUT9Q9Y231 359 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 LINC00588Q9Y4M8 146 aa8.61□□□□□ -1.03
MSH5-209ENST00000450148 GAGE12BA1L429 117 aa8.6□□□□□ -1.03
MSH5-209ENST00000450148 GAGE7O76087 117 aa8.6□□□□□ -1.03
MSH5-209ENST00000450148 OR10J4P0C629 311 aa8.6□□□□□ -1.03
MSH5-209ENST00000450148 GAGE12FP0CL80 117 aa8.6□□□□□ -1.03
MSH5-209ENST00000450148 GAGE12GP0CL81 117 aa8.6□□□□□ -1.03
MSH5-209ENST00000450148 GAGE12IP0CL82 117 aa8.6□□□□□ -1.03
MSH5-209ENST00000450148 FAM122CQ6P4D5 195 aa8.6□□□□□ -1.03
MSH5-209ENST00000450148 Q6ZTI0 123 aa8.6□□□□□ -1.03
MSH5-209ENST00000450148 PAXXQ9BUH6 204 aa8.6□□□□□ -1.03
MSH5-209ENST00000450148 AAMDCQ9H7C9 122 aa8.6□□□□□ -1.03
MSH5-209ENST00000450148 WFDC1Q9HC57 220 aa8.6□□□□□ -1.03
MSH5-209ENST00000450148 KCNIP2Q9NS61 270 aa8.6□□□□□ -1.03
MSH5-209ENST00000450148 ZNF492Q9P255 531 aa8.6□□□□□ -1.03
MSH5-209ENST00000450148 SNURFLB1AK76 121 aa8.59□□□□□ -1.03
MSH5-209ENST00000450148 NMBP08949 121 aa8.59□□□□□ -1.03
MSH5-209ENST00000450148 DEFA1P59665 94 aa8.59□□□□□ -1.03
MSH5-209ENST00000450148 DEFA3P59666 94 aa8.59□□□□□ -1.03
MSH5-209ENST00000450148 ANXA2RQ3ZCQ2 193 aa8.59□□□□□ -1.03
MSH5-209ENST00000450148 C18orf15Q96N68 181 aa8.59□□□□□ -1.03
MSH5-209ENST00000450148 ATG101Q9BSB4 218 aa8.59□□□□□ -1.03
MSH5-209ENST00000450148 GSN-AS1Q9NRJ2 163 aa8.59□□□□□ -1.03
MSH5-209ENST00000450148 MBD2Q9UBB5 411 aa8.59□□□□□ -1.03
MSH5-209ENST00000450148 PKD1P98161 4303 aa8.58□□□□□ -1.04
MSH5-209ENST00000450148 KIAA1109Q2LD37 5005 aa8.58□□□□□ -1.04
MSH5-209ENST00000450148 TRAV26-1A0A087WT03 109 aa8.58□□□□□ -1.04
MSH5-209ENST00000450148 NBDYA0A0U1RRE5 68 aa8.58□□□□□ -1.04
MSH5-209ENST00000450148 C17orf112F2Z3M2 114 aa8.58□□□□□ -1.04
MSH5-209ENST00000450148 SSNA1O43805 119 aa8.58□□□□□ -1.04
MSH5-209ENST00000450148 RPL12P30050 165 aaKnown RBP8.58□□□□□ -1.04
MSH5-209ENST00000450148 RNASE4P34096 147 aaKnown RBP8.58□□□□□ -1.04
MSH5-209ENST00000450148 OR5I1Q13606 314 aa8.58□□□□□ -1.04
MSH5-209ENST00000450148 C1orf134Q5TEV5 83 aa8.58□□□□□ -1.04
MSH5-209ENST00000450148 EIF4E3Q8N5X7 224 aaKnown RBP8.58□□□□□ -1.04
MSH5-209ENST00000450148 RXFP4Q8TDU9 374 aa8.58□□□□□ -1.04
MSH5-209ENST00000450148 SMIM3Q9BZL3 60 aa8.58□□□□□ -1.04
MSH5-209ENST00000450148 TMPRSS5Q9H3S3 457 aa8.58□□□□□ -1.04
MSH5-209ENST00000450148 TP53TG3Q9ULZ0 132 aa8.58□□□□□ -1.04
MSH5-209ENST00000450148 KLF12Q9Y4X4 402 aa8.58□□□□□ -1.04
MSH5-209ENST00000450148 PKHD1P08F94 4074 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 TRBV7-9A0A0J9YWB2 115 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 A0A0J9YY99 117 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 H3BNG1 76 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 SPINK4O60575 86 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 EIF3GO75821 320 aaKnown RBP eCLIP8.57□□□□□ -1.04
MSH5-209ENST00000450148 GPX1P07203 203 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 PET100P0DJ07 73 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 M6PRP20645 277 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 CCL18P55774 89 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 TCL1AP56279 114 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 FFAR4Q5NUL3 377 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 TMEM78Q5T7P6 136 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 SSX7Q7RTT5 188 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 ZNF680Q8NEM1 530 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 GNPNAT1Q96EK6 184 aaPredicted RBP8.57□□□□□ -1.04
MSH5-209ENST00000450148 VSIG2Q96IQ7 327 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 Q9H3A6 140 aa8.57□□□□□ -1.04
MSH5-209ENST00000450148 DYNC1H1Q14204 4646 aaKnown RBP8.57□□□□□ -1.04
MSH5-209ENST00000450148 RBAKDNA6NC62 111 aa8.56□□□□□ -1.04
MSH5-209ENST00000450148 OR7C2O60412 319 aa8.56□□□□□ -1.04
MSH5-209ENST00000450148 ZNF138P52744 262 aa8.56□□□□□ -1.04
MSH5-209ENST00000450148 RANP62826 216 aaKnown RBP8.56□□□□□ -1.04
MSH5-209ENST00000450148 IBA57Q5T440 356 aaKnown RBP8.56□□□□□ -1.04
MSH5-209ENST00000450148 LYPD1Q8N2G4 141 aa8.56□□□□□ -1.04
MSH5-209ENST00000450148 Q8TAT8 98 aa8.56□□□□□ -1.04
MSH5-209ENST00000450148 DNAH11Q96DT5 4516 aa8.56□□□□□ -1.04
MSH5-209ENST00000450148 IGHV1OR15-1A0A075B7D0 117 aa8.55□□□□□ -1.04
MSH5-209ENST00000450148 IFNA5P01569 189 aa8.55□□□□□ -1.04
MSH5-209ENST00000450148 ESRGQ1W209 222 aa8.55□□□□□ -1.04
MSH5-209ENST00000450148 SOHLH1Q5JUK2 328 aa8.55□□□□□ -1.04
MSH5-209ENST00000450148 UPK3BQ9BT76 320 aa8.55□□□□□ -1.04
MSH5-209ENST00000450148 KRTAP1-5Q9BYS1 174 aa8.55□□□□□ -1.04
MSH5-209ENST00000450148 ALG5Q9Y673 324 aa8.55□□□□□ -1.04
MSH5-209ENST00000450148 A0A096LPF7 62 aa8.54□□□□□ -1.04
MSH5-209ENST00000450148 TRGV1A0A0A0MS02 117 aa8.54□□□□□ -1.04
MSH5-209ENST00000450148 DIRC3C9JPN6 131 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms