RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 TXNDC17Q9BRA2 123 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 LINC00467Q9BRT7 94 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 TMEM147Q9BVK8 224 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 SLC25A39Q9BZJ4 359 aaPredicted RBP3.87□□□□□ -1.79
USP49-205ENST00000448078 DNAJC4Q9NNZ3 241 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 MRPL36Q9P0J6 103 aaKnown RBP3.87□□□□□ -1.79
USP49-205ENST00000448078 BLOC1S6Q9UL45 172 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 SSR3Q9UNL2 185 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 HHLA3Q9XRX5 114 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 HMCN2Q8NDA2 5059 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 TRAV8-6A0A0B4J262 113 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 PIGBOS1A0A0B4J2F0 54 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 C3orf85A0A1B0GTC6 90 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 PLAC8L1A1L4L8 177 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 MEIS3P1A6NDR6 274 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 ORM1P02763 201 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 GNAO1P09471 354 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 RPL7P18124 248 aaKnown RBP3.86□□□□□ -1.79
USP49-205ENST00000448078 ELK1P19419 428 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 HLA-DMAP28067 261 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 BSXQ3C1V8 233 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 PRSS48Q7RTY5 328 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 CROCCP3Q8IVE0 287 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 ARRDC1Q8N5I2 433 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 LINC00612Q8N6U2 182 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 ZNF680Q8NEM1 530 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 BPIFCQ8NFQ6 507 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 OR8A1Q8NGG7 326 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 OR4D10Q8NGI6 311 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 RNASE8Q8TDE3 154 aaKnown RBP3.86□□□□□ -1.79
USP49-205ENST00000448078 C2orf48Q96LS8 159 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 DUSP21Q9H596 190 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 FUT9Q9Y231 359 aa3.86□□□□□ -1.79
USP49-205ENST00000448078 RCL1Q9Y2P8 373 aaKnown RBP3.86□□□□□ -1.79
USP49-205ENST00000448078 TRGV1A0A0A0MS02 117 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 TRGV4A0A0C4DH28 118 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 RBFOX3A6NFN3 312 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 TNFAIP8O95379 198 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 IGKV1-39P01597 117 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 IGKV1D-39P04432 117 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 PRB4P10163 310 aaPredicted RBP3.85□□□□□ -1.79
USP49-205ENST00000448078 ORM2P19652 201 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 HRH1P35367 487 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 LEPP41159 167 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 ASIPP42127 132 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 PIGPP57054 158 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 RND3P61587 244 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 CST9LP1Q5W188 147 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 LGI3Q8N145 548 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 VSIG2Q96IQ7 327 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 NDUFB11Q9NX14 153 aa3.85□□□□□ -1.79
USP49-205ENST00000448078 IGHV3-38A0A0C4DH36 116 aa3.84□□□□□ -1.79
USP49-205ENST00000448078 SMIM30A4D0T7 59 aa3.84□□□□□ -1.79
USP49-205ENST00000448078 C9JCJ5 164 aa3.84□□□□□ -1.79
USP49-205ENST00000448078 PRAF2O60831 178 aa3.84□□□□□ -1.79
USP49-205ENST00000448078 IGKV1-5P01602 117 aa3.84□□□□□ -1.79
USP49-205ENST00000448078 RPL37AP61513 92 aaKnown RBP3.84□□□□□ -1.79
USP49-205ENST00000448078 ZNF90Q03938 601 aa3.84□□□□□ -1.79
USP49-205ENST00000448078 LAIR2Q6ISS4 152 aa3.84□□□□□ -1.79
USP49-205ENST00000448078 Q6ZTI0 123 aa3.84□□□□□ -1.79
USP49-205ENST00000448078 Q8N976 141 aa3.84□□□□□ -1.79
USP49-205ENST00000448078 RPUSD4Q96CM3 377 aaKnown RBP3.84□□□□□ -1.79
USP49-205ENST00000448078 TRGV9Q99603 122 aa3.84□□□□□ -1.79
USP49-205ENST00000448078 CHAC1Q9BUX1 264 aa3.84□□□□□ -1.79
USP49-205ENST00000448078 MRPL32Q9BYC8 188 aaKnown RBP3.84□□□□□ -1.79
USP49-205ENST00000448078 PAIP2BQ9ULR5 123 aaKnown RBP3.84□□□□□ -1.79
USP49-205ENST00000448078 KCNIP3Q9Y2W7 256 aa3.84□□□□□ -1.79
USP49-205ENST00000448078 RNF213Q63HN8 5207 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 TRAV8-3A0A0A6YYJ7 113 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 A0A0U1RQV1 116 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 LRCOL1A6NCL2 159 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 IBA57-AS1B1ANH7 110 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 E5RGE8 158 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 HYPMO75409 117 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 IGLV2-8P01709 118 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 SEC11BP0C7V7 166 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 SULT1A3P0DMM9 295 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 SULT1A4P0DMN0 295 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 AKR1C4P17516 323 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 SDC2P34741 201 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 PPT1P50897 306 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 MXD1Q05195 221 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 SP6Q3SY56 376 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 HIGD2BQ4VC39 106 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 NMSQ5H8A3 153 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 RNF182Q8N6D2 247 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 OR1S1Q8NH92 325 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 RMI2Q96E14 147 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 SLC25A31Q9H0C2 315 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 FXYD6Q9H0Q3 95 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 Q9HAA7 133 aa3.83□□□□□ -1.8
USP49-205ENST00000448078 TXNL4BQ9NX01 149 aaKnown RBP3.83□□□□□ -1.8
USP49-205ENST00000448078 C14orf166Q9Y224 244 aaKnown RBP3.83□□□□□ -1.8
USP49-205ENST00000448078 TRAV12-3A0A0B4J271 114 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 A0A0D9SG52 128 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 FABP12A6NFH5 140 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 CDS2O95674 445 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 IL5P05113 134 aa3.82□□□□□ -1.8
USP49-205ENST00000448078 SLC25A5P05141 298 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms