RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 D6R8Y8 96 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 ARMS2P0C7Q2 107 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 C14orf178Q8N769 122 aaPredicted RBP5.8□□□□□ -1.48
SYNE1-213ENST00000448038 DPH3P1Q9H4G8 78 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 ODF3BA8MYP8 253 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 RIPPLY3P57055 190 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 C17orf77Q96MU5 243 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 MYO18BQ8IUG5 2567 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 A6NDN8 102 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 TNFRSF13BO14836 293 aaPredicted RBP5.8□□□□□ -1.48
SYNE1-213ENST00000448038 PRSS2P07478 247 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 PFN1P07737 140 aaKnown RBP5.8□□□□□ -1.48
SYNE1-213ENST00000448038 IFI27P40305 119 aaPredicted RBP5.8□□□□□ -1.48
SYNE1-213ENST00000448038 COTL1Q14019 142 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 AJUBAQ96IF1 538 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 PRR25Q96S07 402 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 MCRIP2Q9BUT9 160 aaKnown RBP5.8□□□□□ -1.48
SYNE1-213ENST00000448038 KNCNA6PVL3 124 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 HBDP02042 147 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 AMBPP02760 352 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 CTSGP08311 255 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 IGHV4-31P0DP07 118 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 LYRM7Q5U5X0 104 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 SLC25A34Q6PIV7 304 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 NIT1Q86X76 327 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 PRADC1Q9BSG0 188 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 ZNF492Q9P255 531 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 CYSLTR1Q9Y271 337 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 NAV3Q8IVL0 2385 aa5.8□□□□□ -1.48
SYNE1-213ENST00000448038 IGHG2P01859 326 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 ORMDL2Q53FV1 153 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 TNCP24821 2201 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 CRYGCP07315 174 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 SLURP1P55000 103 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 OR11H2Q8NH07 326 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 A6NDX4 124 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 MEIG1Q5JSS6 88 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 PRSS57Q6UWY2 283 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 VCX2Q9H322 139 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 UQCR10Q9UDW1 63 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 HLA-DMBP28068 263 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 KLK9Q9UKQ9 250 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 CHD7Q9P2D1 2997 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 TRAV12-2A0A075B6T6 113 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 TRAV8-6A0A0B4J262 113 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 CDKN1BP46527 198 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 CIRBPQ14011 172 aaKnown RBP5.79□□□□□ -1.48
SYNE1-213ENST00000448038 GFI1BQ5VTD9 330 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 DYNAPQ8N1N2 210 aa5.79□□□□□ -1.48
SYNE1-213ENST00000448038 A0A087WWL8 130 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 C5orf52A6NGY3 159 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 ZNF876PQ49A33 203 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 VGLL1Q99990 258 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 CHCHD5Q9BSY4 110 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 GFRA4Q9GZZ7 299 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 INS-IGF2F8WCM5 200 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 ZNF25P17030 456 aaPredicted RBP5.78□□□□□ -1.48
SYNE1-213ENST00000448038 RPL36AP83881 106 aaKnown RBP5.78□□□□□ -1.48
SYNE1-213ENST00000448038 RPL36ALQ969Q0 106 aaKnown RBP5.78□□□□□ -1.48
SYNE1-213ENST00000448038 HIST1H4GQ99525 98 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 A0A1B0GUS0 222 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 DEFB130BP0DP73 79 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 DEFB130AP0DP74 79 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 PLA2G2AP14555 144 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 AMN1Q8IY45 258 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 CHCHD1Q96BP2 118 aaKnown RBP5.78□□□□□ -1.48
SYNE1-213ENST00000448038 BRWD1-AS2P59051 145 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 C1orf229Q6ZS94 237 aaPredicted RBP5.78□□□□□ -1.48
SYNE1-213ENST00000448038 DEFB104AQ8WTQ1 72 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 ALKBH7Q9BT30 221 aaPredicted RBP5.78□□□□□ -1.48
SYNE1-213ENST00000448038 TMEM238LA0A1B0GVL6 79 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 A6NJY4 79 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 RPL13AP40429 203 aaKnown RBP5.78□□□□□ -1.48
SYNE1-213ENST00000448038 DNLZQ5SXM8 178 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 C11orf52Q96A22 123 aa5.78□□□□□ -1.48
SYNE1-213ENST00000448038 EXPH5Q8NEV8 1989 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 PRRC2AP48634 2157 aaKnown RBP5.77□□□□□ -1.49
SYNE1-213ENST00000448038 IGHV1OR15-1A0A075B7D0 117 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 F6UB75 175 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 H3BRM9 83 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 GCSHP23434 173 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 PATE2Q6UY27 113 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 RAB37Q96AX2 223 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 MEGF9Q9H1U4 602 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 MS4A6AQ9H2W1 248 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 IGHV4OR15-8A0A075B7B6 117 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 A0A087WW49 117 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 LAGE3Q14657 143 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 OR9G4Q8NGQ1 327 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 ATP6V0BQ99437 205 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 PMCHL2Q9BQD1 86 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 TOMM7Q9P0U1 55 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 P0C879 139 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 CD28P10747 220 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 HINT1P49773 126 aaPredicted RBP5.77□□□□□ -1.49
SYNE1-213ENST00000448038 ANXA2RQ3ZCQ2 193 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 CT83Q5H943 113 aa5.77□□□□□ -1.49
SYNE1-213ENST00000448038 MRPL36Q9P0J6 103 aaKnown RBP5.77□□□□□ -1.49
SYNE1-213ENST00000448038 TMEM213A2RRL7 107 aa5.76□□□□□ -1.49
SYNE1-213ENST00000448038 FAM231BA6NCW3 169 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms