RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ARRDC1-AS1Q9H2J1 176 aa10.91□□□□□ -0.66
VPS52-212ENST00000445902 CTSZQ9UBR2 303 aa10.91□□□□□ -0.66
VPS52-212ENST00000445902 SH3BGRL2Q9UJC5 107 aa10.91□□□□□ -0.66
VPS52-212ENST00000445902 ARHGAP32A7KAX9 2087 aa10.9□□□□□ -0.66
VPS52-212ENST00000445902 K7EM74 188 aa10.9□□□□□ -0.66
VPS52-212ENST00000445902 MRPS12O15235 138 aaKnown RBP10.9□□□□□ -0.66
VPS52-212ENST00000445902 SYT8Q8NBV8 401 aa10.9□□□□□ -0.66
VPS52-212ENST00000445902 PRO0461Q9UI25 63 aa10.9□□□□□ -0.66
VPS52-212ENST00000445902 TTC9CQ8N5M4 171 aa10.9□□□□□ -0.66
VPS52-212ENST00000445902 PRR25Q96S07 402 aa10.9□□□□□ -0.66
VPS52-212ENST00000445902 CACNA1BQ00975 2339 aa10.9□□□□□ -0.66
VPS52-212ENST00000445902 ATMQ13315 3056 aa10.9□□□□□ -0.67
VPS52-212ENST00000445902 TRAV26-2A0A0B4J265 109 aa10.89□□□□□ -0.67
VPS52-212ENST00000445902 K7EIM0 57 aa10.89□□□□□ -0.67
VPS52-212ENST00000445902 RRN3P1Q2M238 152 aa10.89□□□□□ -0.67
VPS52-212ENST00000445902 PIFOQ8TCI5 191 aa10.89□□□□□ -0.67
VPS52-212ENST00000445902 GLMPQ8WWB7 406 aa10.89□□□□□ -0.67
VPS52-212ENST00000445902 MRAP2Q96G30 205 aa10.89□□□□□ -0.67
VPS52-212ENST00000445902 IGHV3-23P01764 117 aa10.89□□□□□ -0.67
VPS52-212ENST00000445902 IGHV1-8P0DP01 117 aa10.89□□□□□ -0.67
VPS52-212ENST00000445902 LOXP28300 417 aaPredicted RBP10.89□□□□□ -0.67
VPS52-212ENST00000445902 EFNA4P52798 201 aa10.89□□□□□ -0.67
VPS52-212ENST00000445902 CRYGBP07316 175 aa10.89□□□□□ -0.67
VPS52-212ENST00000445902 COX7A1P24310 79 aa10.89□□□□□ -0.67
VPS52-212ENST00000445902 LYPD1Q8N2G4 141 aa10.89□□□□□ -0.67
VPS52-212ENST00000445902 CYSLTR1Q9Y271 337 aa10.89□□□□□ -0.67
VPS52-212ENST00000445902 ZNF575Q86XF7 245 aa10.88□□□□□ -0.67
VPS52-212ENST00000445902 LINC00311Q8N616 119 aa10.88□□□□□ -0.67
VPS52-212ENST00000445902 MT-ATP8P03928 68 aa10.88□□□□□ -0.67
VPS52-212ENST00000445902 IGLC6P0CF74 106 aa10.88□□□□□ -0.67
VPS52-212ENST00000445902 CD40P25942 277 aa10.88□□□□□ -0.67
VPS52-212ENST00000445902 ZNF502Q8TBZ5 544 aa10.88□□□□□ -0.67
VPS52-212ENST00000445902 KLK15Q9H2R5 256 aa10.88□□□□□ -0.67
VPS52-212ENST00000445902 IGHV3-35A0A0C4DH35 117 aa10.87□□□□□ -0.67
VPS52-212ENST00000445902 SPINK8P0C7L1 97 aa10.87□□□□□ -0.67
VPS52-212ENST00000445902 TCTEX1D4Q5JR98 221 aa10.87□□□□□ -0.67
VPS52-212ENST00000445902 PTH2Q96A98 100 aa10.87□□□□□ -0.67
VPS52-212ENST00000445902 NXT2Q9NPJ8 142 aaKnown RBP10.87□□□□□ -0.67
VPS52-212ENST00000445902 IGHV1-3A0A0C4DH29 117 aa10.87□□□□□ -0.67
VPS52-212ENST00000445902 TRGV3P03979 118 aa10.87□□□□□ -0.67
VPS52-212ENST00000445902 ZNF418Q8TF45 676 aaPredicted RBP10.87□□□□□ -0.67
VPS52-212ENST00000445902 SHISA9B4DS77 424 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 ERCC8Q13216 396 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 FHL3Q13643 280 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 C8orf86Q6ZUL3 223 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 PGPEP1Q9NXJ5 209 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 C17orf100A8MU93 164 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 ATP5LO75964 103 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 DLX6P56179 175 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 FOXI1Q12951 378 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 NFE4Q86UQ8 179 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 DTX2Q86UW9 622 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 RPEQ96AT9 228 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 MRPL16Q9NX20 251 aaKnown RBP10.86□□□□□ -0.67
VPS52-212ENST00000445902 LINC01548A6NM66 108 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 NCBP2LA6PVI3 153 aaKnown RBP10.86□□□□□ -0.67
VPS52-212ENST00000445902 TMEM178BH3BS89 294 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 CEACAM4O75871 244 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 GATA3P23771 443 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 CDIP1Q9H305 208 aa10.86□□□□□ -0.67
VPS52-212ENST00000445902 TMEM238LA0A1B0GVL6 79 aa10.85□□□□□ -0.67
VPS52-212ENST00000445902 TMEM155Q4W5P6 130 aa10.85□□□□□ -0.67
VPS52-212ENST00000445902 MORN3Q6PF18 240 aaPredicted RBP10.85□□□□□ -0.67
VPS52-212ENST00000445902 MYOZ3Q8TDC0 251 aa10.85□□□□□ -0.67
VPS52-212ENST00000445902 UFC1Q9Y3C8 167 aa10.85□□□□□ -0.67
VPS52-212ENST00000445902 CUL9Q8IWT3 2517 aa10.85□□□□□ -0.67
VPS52-212ENST00000445902 LOC107984156A0A0G2JMH3 177 aa10.85□□□□□ -0.67
VPS52-212ENST00000445902 SMCPP49901 116 aaPredicted RBP10.85□□□□□ -0.67
VPS52-212ENST00000445902 SRSF1Q07955 248 aaKnown RBP eCLIP10.85□□□□□ -0.67
VPS52-212ENST00000445902 ARL17AQ8IVW1 177 aa10.85□□□□□ -0.67
VPS52-212ENST00000445902 TRBV7-3A0A075B6L6 115 aa10.84□□□□□ -0.67
VPS52-212ENST00000445902 VSTM5A8MXK1 200 aa10.84□□□□□ -0.67
VPS52-212ENST00000445902 TGFAP01135 160 aa10.84□□□□□ -0.67
VPS52-212ENST00000445902 PSMB2P49721 201 aa10.84□□□□□ -0.67
VPS52-212ENST00000445902 GFRALQ6UXV0 394 aa10.84□□□□□ -0.67
VPS52-212ENST00000445902 GVINP1Q7Z2Y8 2422 aa10.84□□□□□ -0.67
VPS52-212ENST00000445902 ADIPOQQ15848 244 aa10.84□□□□□ -0.67
VPS52-212ENST00000445902 SVEP1Q4LDE5 3571 aa10.84□□□□□ -0.67
VPS52-212ENST00000445902 TRAV17A0A0B4J275 112 aa10.83□□□□□ -0.68
VPS52-212ENST00000445902 MBD3L4A6NDZ8 208 aaPredicted RBP10.83□□□□□ -0.68
VPS52-212ENST00000445902 MBD3L3A6NE82 208 aaPredicted RBP10.83□□□□□ -0.68
VPS52-212ENST00000445902 MBD3L5A6NJ08 208 aaPredicted RBP10.83□□□□□ -0.68
VPS52-212ENST00000445902 XGP55808 180 aa10.83□□□□□ -0.68
VPS52-212ENST00000445902 C1orf210Q8IVY1 113 aa10.83□□□□□ -0.68
VPS52-212ENST00000445902 Q8N8P6 123 aa10.83□□□□□ -0.68
VPS52-212ENST00000445902 MBD3L2Q8NHZ7 208 aaPredicted RBP10.83□□□□□ -0.68
VPS52-212ENST00000445902 C1QTNF4Q9BXJ3 329 aa10.83□□□□□ -0.68
VPS52-212ENST00000445902 FAM215AQ9Y5M1 114 aa10.83□□□□□ -0.68
VPS52-212ENST00000445902 LRBAP50851 2863 aa10.83□□□□□ -0.68
VPS52-212ENST00000445902 ZFP2Q6ZN57 461 aa10.83□□□□□ -0.68
VPS52-212ENST00000445902 HOXA3O43365 443 aaPredicted RBP10.83□□□□□ -0.68
VPS52-212ENST00000445902 IGLV2-18A0A075B6J9 118 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 A0A087WX48 190 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 LINC01549A6NIU2 74 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 PRAC2D3DTV9 90 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 PDE6HQ13956 83 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 RNF182Q8N6D2 247 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 C8orf31Q8N9H6 132 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 CACNA1HO95180 2353 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 OR11H12B2RN74 326 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms