RNA–Protein interactions for RNA: ENST00000445752.5

CCDC144B-202, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2 BASIC

Gene CCDC144B, Length 2,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-202ENST00000445752 Q5PR19 223 aa12.24□□□□□ -0.45
CCDC144B-202ENST00000445752 SMAD7O15105 426 aaKnown RBP12.23□□□□□ -0.45
CCDC144B-202ENST00000445752 ZNF705DP0CH99 300 aaPredicted RBP12.23□□□□□ -0.45
CCDC144B-202ENST00000445752 ZNF705BP0CI00 300 aaPredicted RBP12.23□□□□□ -0.45
CCDC144B-202ENST00000445752 SSTP61278 116 aa12.23□□□□□ -0.45
CCDC144B-202ENST00000445752 RIGQ13278 110 aa12.23□□□□□ -0.45
CCDC144B-202ENST00000445752 Q6AWC8 147 aa12.23□□□□□ -0.45
CCDC144B-202ENST00000445752 NRN1Q9NPD7 142 aa12.23□□□□□ -0.45
CCDC144B-202ENST00000445752 ABCA12Q86UK0 2595 aa12.23□□□□□ -0.45
CCDC144B-202ENST00000445752 A0A0G2JLM5 398 aa12.23□□□□□ -0.45
CCDC144B-202ENST00000445752 RNASEKQ6P5S7 137 aaKnown RBP12.23□□□□□ -0.45
CCDC144B-202ENST00000445752 GLMPQ8WWB7 406 aa12.23□□□□□ -0.45
CCDC144B-202ENST00000445752 BORCS7Q96B45 105 aa12.23□□□□□ -0.45
CCDC144B-202ENST00000445752 BEX4Q9NWD9 120 aaPredicted RBP12.23□□□□□ -0.45
CCDC144B-202ENST00000445752 RNF114Q9Y508 228 aa12.23□□□□□ -0.45
CCDC144B-202ENST00000445752 LOC102724200A0A096LPH7 203 aaPredicted RBP12.22□□□□□ -0.45
CCDC144B-202ENST00000445752 BMI1P35226 326 aa12.22□□□□□ -0.45
CCDC144B-202ENST00000445752 KRTDAPP60985 99 aa12.22□□□□□ -0.45
CCDC144B-202ENST00000445752 CFHR3Q02985 330 aa12.22□□□□□ -0.45
CCDC144B-202ENST00000445752 C16orf92Q96LL3 132 aa12.22□□□□□ -0.45
CCDC144B-202ENST00000445752 CR1P17927 2039 aa12.22□□□□□ -0.45
CCDC144B-202ENST00000445752 RBAKDNA6NC62 111 aa12.22□□□□□ -0.45
CCDC144B-202ENST00000445752 HSBP1O75506 76 aa12.22□□□□□ -0.45
CCDC144B-202ENST00000445752 LYZL1Q6UWQ5 148 aa12.22□□□□□ -0.45
CCDC144B-202ENST00000445752 IL17RELQ6ZVW7 336 aa12.22□□□□□ -0.45
CCDC144B-202ENST00000445752 NPFFR1Q9GZQ6 430 aa12.21□□□□□ -0.45
CCDC144B-202ENST00000445752 NAV2Q8IVL1 2488 aa12.21□□□□□ -0.46
CCDC144B-202ENST00000445752 MUC21A0A0G2JKD1 596 aa12.2□□□□□ -0.46
CCDC144B-202ENST00000445752 MUC21A0A140T8X8 626 aa12.2□□□□□ -0.46
CCDC144B-202ENST00000445752 M0QZ24 198 aa12.2□□□□□ -0.46
CCDC144B-202ENST00000445752 DDTP30046 118 aa12.2□□□□□ -0.46
CCDC144B-202ENST00000445752 MUC21Q5SSG8 566 aa12.2□□□□□ -0.46
CCDC144B-202ENST00000445752 AGPAT4-IT1Q9H0P7 198 aa12.2□□□□□ -0.46
CCDC144B-202ENST00000445752 ORM1P02763 201 aa12.2□□□□□ -0.46
CCDC144B-202ENST00000445752 NIT1Q86X76 327 aa12.2□□□□□ -0.46
CCDC144B-202ENST00000445752 Q96MF0 132 aa12.2□□□□□ -0.46
CCDC144B-202ENST00000445752 A0A1B0GW15 77 aa12.19□□□□□ -0.46
CCDC144B-202ENST00000445752 TMEM78Q5T7P6 136 aa12.19□□□□□ -0.46
CCDC144B-202ENST00000445752 C10orf99Q6UWK7 81 aa12.19□□□□□ -0.46
CCDC144B-202ENST00000445752 MRPL53Q96EL3 112 aaKnown RBP12.19□□□□□ -0.46
CCDC144B-202ENST00000445752 FABP5P3A8MUU1 101 aa12.19□□□□□ -0.46
CCDC144B-202ENST00000445752 RPL11P62913 178 aaKnown RBP12.19□□□□□ -0.46
CCDC144B-202ENST00000445752 DEFA6Q01524 100 aa12.19□□□□□ -0.46
CCDC144B-202ENST00000445752 FAM209BQ5JX69 171 aa12.19□□□□□ -0.46
CCDC144B-202ENST00000445752 LRRC75A-AS1Q8N1F1 130 aa12.19□□□□□ -0.46
CCDC144B-202ENST00000445752 URB1-AS1Q96HZ7 61 aa12.19□□□□□ -0.46
CCDC144B-202ENST00000445752 TMEM213A2RRL7 107 aa12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 M0R2Z0 102 aa12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 RPS20P60866 119 aaKnown RBP12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 TM4SF20Q53R12 229 aa12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 C9orf139Q6ZV77 190 aa12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 FSHBP01225 129 aa12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 PSMB8P28062 276 aa12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 ZNF138P52744 262 aa12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 GPHB5Q86YW7 130 aa12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 FER1L6-AS1Q8NA97 138 aa12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 ZNF738Q8NE65 137 aa12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 C20orf173Q96LM9 149 aa12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 PEF1Q9UBV8 284 aaKnown RBP12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 ZNF580Q9UK33 172 aa12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 VPREB3Q9UKI3 123 aa12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 SELENOKQ9Y6D0 94 aa12.18□□□□□ -0.46
CCDC144B-202ENST00000445752 NBPF19A0A087WUL8 3843 aa12.17□□□□□ -0.46
CCDC144B-202ENST00000445752 IGKV3-7A0A075B6H7 116 aa12.17□□□□□ -0.46
CCDC144B-202ENST00000445752 GATD1Q8NB37 220 aa12.17□□□□□ -0.46
CCDC144B-202ENST00000445752 TDRG1Q3Y452 100 aa12.16□□□□□ -0.46
CCDC144B-202ENST00000445752 Q6YL49 198 aa12.16□□□□□ -0.46
CCDC144B-202ENST00000445752 IGHV7-4-1A0A0J9YVY3 117 aa12.16□□□□□ -0.46
CCDC144B-202ENST00000445752 C3orf79P0CE67 100 aa12.16□□□□□ -0.46
CCDC144B-202ENST00000445752 PMCHL1Q16048 86 aa12.16□□□□□ -0.46
CCDC144B-202ENST00000445752 C9orf47Q6ZRZ4 202 aa12.16□□□□□ -0.46
CCDC144B-202ENST00000445752 ZNF575Q86XF7 245 aa12.16□□□□□ -0.46
CCDC144B-202ENST00000445752 RHPN1-AS1Q9BWJ2 59 aa12.16□□□□□ -0.46
CCDC144B-202ENST00000445752 DAZ1Q9NQZ3 744 aaKnown RBP12.16□□□□□ -0.46
CCDC144B-202ENST00000445752 CLEC5AQ9NY25 188 aa12.16□□□□□ -0.46
CCDC144B-202ENST00000445752 MXRA5Q9NR99 2828 aa12.16□□□□□ -0.46
CCDC144B-202ENST00000445752 HOXA3O43365 443 aaPredicted RBP12.15□□□□□ -0.46
CCDC144B-202ENST00000445752 SRSF2Q01130 221 aaKnown RBP12.15□□□□□ -0.46
CCDC144B-202ENST00000445752 TEX43Q6ZNM6 134 aa12.15□□□□□ -0.46
CCDC144B-202ENST00000445752 CSN3P07498 182 aa12.15□□□□□ -0.47
CCDC144B-202ENST00000445752 IGLC6P0CF74 106 aa12.15□□□□□ -0.47
CCDC144B-202ENST00000445752 EDN2P20800 178 aa12.15□□□□□ -0.47
CCDC144B-202ENST00000445752 CTRLP40313 264 aa12.15□□□□□ -0.47
CCDC144B-202ENST00000445752 TWIST1Q15672 202 aa12.15□□□□□ -0.47
CCDC144B-202ENST00000445752 ZNF493Q6ZR52 646 aa12.15□□□□□ -0.47
CCDC144B-202ENST00000445752 Q8N976 141 aa12.15□□□□□ -0.47
CCDC144B-202ENST00000445752 APCP25054 2843 aa12.14□□□□□ -0.47
CCDC144B-202ENST00000445752 FAM181BA6NEQ2 426 aa12.14□□□□□ -0.47
CCDC144B-202ENST00000445752 SOCS3O14543 225 aa12.14□□□□□ -0.47
CCDC144B-202ENST00000445752 LINC00614P0C842 121 aa12.14□□□□□ -0.47
CCDC144B-202ENST00000445752 LINC01559Q495D7 138 aa12.14□□□□□ -0.47
CCDC144B-202ENST00000445752 FAM106AQ4KMX7 169 aa12.14□□□□□ -0.47
CCDC144B-202ENST00000445752 AMN1Q8IY45 258 aa12.14□□□□□ -0.47
CCDC144B-202ENST00000445752 CHCHD1Q96BP2 118 aaKnown RBP12.14□□□□□ -0.47
CCDC144B-202ENST00000445752 C14orf144Q96I85 54 aa12.14□□□□□ -0.47
CCDC144B-202ENST00000445752 RPLP1P05386 114 aaKnown RBP12.13□□□□□ -0.47
CCDC144B-202ENST00000445752 KRTAP1-3Q8IUG1 177 aa12.13□□□□□ -0.47
CCDC144B-202ENST00000445752 PAM16Q9Y3D7 125 aa12.13□□□□□ -0.47
CCDC144B-202ENST00000445752 ZNF469Q96JG9 3925 aaPredicted RBP12.13□□□□□ -0.47
CCDC144B-202ENST00000445752 CREBBPQ92793 2442 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms