RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 LINC01549A6NIU2 74 aa5.96□□□□□ -1.46
HDAC9-214ENST00000441542 C10orf142B7Z368 130 aa5.96□□□□□ -1.46
HDAC9-214ENST00000441542 ZNF561-AS1K7EIQ3 104 aa5.96□□□□□ -1.46
HDAC9-214ENST00000441542 SCGB1C2P0DMR2 95 aa5.96□□□□□ -1.46
HDAC9-214ENST00000441542 MYCNOSP40205 109 aa5.96□□□□□ -1.46
HDAC9-214ENST00000441542 MZT1Q08AG7 82 aa5.96□□□□□ -1.46
HDAC9-214ENST00000441542 SCGB1D4Q6XE38 83 aa5.96□□□□□ -1.46
HDAC9-214ENST00000441542 NFE4Q86UQ8 179 aa5.96□□□□□ -1.46
HDAC9-214ENST00000441542 NDUFA4L2Q9NRX3 87 aa5.96□□□□□ -1.46
HDAC9-214ENST00000441542 SPRR3Q9UBC9 169 aa5.96□□□□□ -1.46
HDAC9-214ENST00000441542 ZNF292O60281 2723 aa5.96□□□□□ -1.46
HDAC9-214ENST00000441542 CGB1A6NKQ9 187 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 HLA-DRB4P13762 266 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 GP9P14770 177 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 EMP1P54849 157 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 FOXI1Q12951 378 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 SRSF9Q13242 221 aaKnown RBP eCLIP5.95□□□□□ -1.46
HDAC9-214ENST00000441542 PLGLAQ15195 96 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 PHLDA1Q8WV24 401 aaPredicted RBP5.95□□□□□ -1.46
HDAC9-214ENST00000441542 VPREB3Q9UKI3 123 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 KLF12Q9Y4X4 402 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 HLA-DRB4X5D2U9 266 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 BOD1L1Q8NFC6 3051 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 TRGV5A0A0B4J1U4 118 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 WI2-2373I1.2A0A1W2PRP0 233 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 A0A1W2PRX2 142 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 ZNF785A8K8V0 405 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 IGHV3-23P01764 117 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 CCL8P80075 99 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 RRN3P1Q2M238 152 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 CT83Q5H943 113 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 Q6ZUT4 128 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 RPEQ96AT9 228 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 GFRA4Q9GZZ7 299 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 MAP1LC3AQ9H492 121 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 AKAP6Q13023 2319 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 SRRM5B3KS81 715 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 RS1O15537 224 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 SH2D1AO60880 128 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 DPM2O94777 84 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 IL4P05112 153 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 MRPL23Q16540 153 aaKnown RBP5.95□□□□□ -1.46
HDAC9-214ENST00000441542 KLF17Q5JT82 389 aaPredicted RBP5.95□□□□□ -1.46
HDAC9-214ENST00000441542 SAP25Q8TEE9 199 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 VKORC1Q9BQB6 163 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 C1QTNF4Q9BXJ3 329 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 CDIP1Q9H305 208 aa5.95□□□□□ -1.46
HDAC9-214ENST00000441542 MRPS17Q9Y2R5 130 aaKnown RBP5.95□□□□□ -1.46
HDAC9-214ENST00000441542 CSDC2Q9Y534 153 aaKnown RBP5.95□□□□□ -1.46
HDAC9-214ENST00000441542 TNFRSF13BO14836 293 aaPredicted RBP5.94□□□□□ -1.46
HDAC9-214ENST00000441542 FSTL3O95633 263 aa5.94□□□□□ -1.46
HDAC9-214ENST00000441542 ZNF502Q8TBZ5 544 aa5.94□□□□□ -1.46
HDAC9-214ENST00000441542 SLC25A39Q9BZJ4 359 aaPredicted RBP5.94□□□□□ -1.46
HDAC9-214ENST00000441542 SIRPDQ9H106 197 aa5.94□□□□□ -1.46
HDAC9-214ENST00000441542 IGHV3OR16-13A0A075B7E8 117 aa5.94□□□□□ -1.46
HDAC9-214ENST00000441542 IGHV3-74A0A0B4J1X5 117 aa5.94□□□□□ -1.46
HDAC9-214ENST00000441542 A8MZ25 164 aa5.94□□□□□ -1.46
HDAC9-214ENST00000441542 IGLV2-11P01706 119 aa5.94□□□□□ -1.46
HDAC9-214ENST00000441542 HLA-DMBP28068 263 aa5.94□□□□□ -1.46
HDAC9-214ENST00000441542 OTORQ9NRC9 128 aa5.94□□□□□ -1.46
HDAC9-214ENST00000441542 HOXA3O43365 443 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-214ENST00000441542 RASL11BQ9BPW5 248 aa5.93□□□□□ -1.46
HDAC9-214ENST00000441542 CTSZQ9UBR2 303 aa5.93□□□□□ -1.46
HDAC9-214ENST00000441542 SMG1Q96Q15 3661 aaKnown RBP5.93□□□□□ -1.46
HDAC9-214ENST00000441542 ACACBO00763 2458 aa5.93□□□□□ -1.46
HDAC9-214ENST00000441542 NCBP2LA6PVI3 153 aaKnown RBP5.93□□□□□ -1.46
HDAC9-214ENST00000441542 CXCL12P48061 93 aa5.93□□□□□ -1.46
HDAC9-214ENST00000441542 TEX29Q8N6K0 151 aa5.93□□□□□ -1.46
HDAC9-214ENST00000441542 BEX4Q9NWD9 120 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-214ENST00000441542 HHLA3Q9XRX5 114 aa5.93□□□□□ -1.46
HDAC9-214ENST00000441542 SMCPP49901 116 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-214ENST00000441542 SCNM1Q9BWG6 230 aa5.93□□□□□ -1.46
HDAC9-214ENST00000441542 EPG5Q9HCE0 2579 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 TRAV8-2A0A0B4J237 113 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 CCDC179H3BU77 68 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 WT1P19544 449 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-214ENST00000441542 RPL27AP46776 148 aaKnown RBP5.92□□□□□ -1.46
HDAC9-214ENST00000441542 ZFAND6Q6FIF0 208 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 C8orf46Q8TAG6 207 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 MYOZ3Q8TDC0 251 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 LINC00312Q9Y6C7 94 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 PTPRBP23467 1997 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 KALRNO60229 2985 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 IGHV1-18A0A0C4DH31 117 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 IGHV3-66A0A0C4DH42 116 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 EGR2P11161 476 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-214ENST00000441542 TNFAIP6P98066 277 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-214ENST00000441542 GAGE5Q13069 117 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 GAGE6Q13070 117 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 VMA21Q3ZAQ7 101 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 KLHL30-AS1Q8NEE0 82 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 TM2D2Q9BX73 214 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 FBXL15Q9H469 300 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 DSCAMO60469 2012 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 LAMA5O15230 3695 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 DMXL2Q8TDJ6 3036 aa5.92□□□□□ -1.46
HDAC9-214ENST00000441542 PRO0461Q9UI25 63 aa5.91□□□□□ -1.46
HDAC9-214ENST00000441542 ERG28Q9UKR5 140 aa5.91□□□□□ -1.46
HDAC9-214ENST00000441542 PROCRQ9UNN8 238 aa5.91□□□□□ -1.46
HDAC9-214ENST00000441542 SPTBN1Q01082 2364 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms