RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 ZC2HC1AQ96GY0 325 aa12.84□□□□□ -0.35
TMEM39B-203ENST00000441402 C20orf173Q96LM9 149 aa12.84□□□□□ -0.35
TMEM39B-203ENST00000441402 CITED2Q99967 270 aaPredicted RBP12.84□□□□□ -0.35
TMEM39B-203ENST00000441402 P01737 135 aa12.83□□□□□ -0.35
TMEM39B-203ENST00000441402 ID1P41134 155 aa12.83□□□□□ -0.35
TMEM39B-203ENST00000441402 DLX4Q92988 240 aaPredicted RBP12.83□□□□□ -0.35
TMEM39B-203ENST00000441402 RAX2Q96IS3 184 aa12.83□□□□□ -0.35
TMEM39B-203ENST00000441402 AGPAT4-IT1Q9H0P7 198 aa12.83□□□□□ -0.35
TMEM39B-203ENST00000441402 LENEPQ9Y5L5 61 aa12.83□□□□□ -0.35
TMEM39B-203ENST00000441402 A0A1B0GUS0 222 aa12.83□□□□□ -0.36
TMEM39B-203ENST00000441402 FAM231BA6NCW3 169 aa12.83□□□□□ -0.36
TMEM39B-203ENST00000441402 CRIP1P50238 77 aa12.83□□□□□ -0.36
TMEM39B-203ENST00000441402 TSKUQ8WUA8 353 aa12.83□□□□□ -0.36
TMEM39B-203ENST00000441402 LINC00477Q96M19 166 aa12.83□□□□□ -0.36
TMEM39B-203ENST00000441402 NDFIP1Q9BT67 221 aa12.83□□□□□ -0.36
TMEM39B-203ENST00000441402 RPP21Q9H633 154 aaKnown RBP12.83□□□□□ -0.36
TMEM39B-203ENST00000441402 NF1P21359 2839 aa12.82□□□□□ -0.36
TMEM39B-203ENST00000441402 A8MWL6 223 aa12.82□□□□□ -0.36
TMEM39B-203ENST00000441402 HAX1O00165 279 aa12.82□□□□□ -0.36
TMEM39B-203ENST00000441402 CCL24O00175 119 aa12.82□□□□□ -0.36
TMEM39B-203ENST00000441402 CT45A10P0DMU9 189 aa12.82□□□□□ -0.36
TMEM39B-203ENST00000441402 ZNF138P52744 262 aa12.82□□□□□ -0.36
TMEM39B-203ENST00000441402 RAB5BP61020 215 aa12.82□□□□□ -0.36
TMEM39B-203ENST00000441402 RPL19P84098 196 aaKnown RBP12.82□□□□□ -0.36
TMEM39B-203ENST00000441402 ZNF738Q8NE65 137 aa12.82□□□□□ -0.36
TMEM39B-203ENST00000441402 C8orf49Q96NF6 230 aa12.82□□□□□ -0.36
TMEM39B-203ENST00000441402 GFRA4Q9GZZ7 299 aa12.82□□□□□ -0.36
TMEM39B-203ENST00000441402 MS4A6AQ9H2W1 248 aa12.82□□□□□ -0.36
TMEM39B-203ENST00000441402 FN1P02751 2386 aaKnown RBP12.81□□□□□ -0.36
TMEM39B-203ENST00000441402 K7EQG2 157 aa12.81□□□□□ -0.36
TMEM39B-203ENST00000441402 CSN3P07498 182 aa12.81□□□□□ -0.36
TMEM39B-203ENST00000441402 PRB4P10163 310 aaPredicted RBP12.81□□□□□ -0.36
TMEM39B-203ENST00000441402 ERCC8Q13216 396 aa12.81□□□□□ -0.36
TMEM39B-203ENST00000441402 TMEM78Q5T7P6 136 aa12.81□□□□□ -0.36
TMEM39B-203ENST00000441402 FLNBO75369 2602 aaKnown RBP12.81□□□□□ -0.36
TMEM39B-203ENST00000441402 NSD1Q96L73 2696 aaPredicted RBP12.81□□□□□ -0.36
TMEM39B-203ENST00000441402 SMUG1Q53HV7 270 aa12.8□□□□□ -0.36
TMEM39B-203ENST00000441402 C11orf44Q8N8P7 122 aa12.8□□□□□ -0.36
TMEM39B-203ENST00000441402 DUX3Q96PT4 197 aa12.8□□□□□ -0.36
TMEM39B-203ENST00000441402 SIGLEC8Q9NYZ4 499 aa12.8□□□□□ -0.36
TMEM39B-203ENST00000441402 IGKV3-7A0A075B6H7 116 aa12.79□□□□□ -0.36
TMEM39B-203ENST00000441402 TRAV2A0A0B4J234 112 aa12.79□□□□□ -0.36
TMEM39B-203ENST00000441402 IZUMO1RA6ND01 250 aa12.79□□□□□ -0.36
TMEM39B-203ENST00000441402 FOXA3P55318 350 aaPredicted RBP12.79□□□□□ -0.36
TMEM39B-203ENST00000441402 PAFAH1B2P68402 229 aa12.79□□□□□ -0.36
TMEM39B-203ENST00000441402 OR10J6PQ8NGY7 276 aa12.79□□□□□ -0.36
TMEM39B-203ENST00000441402 Q8TAT8 98 aa12.79□□□□□ -0.36
TMEM39B-203ENST00000441402 ASCL2Q99929 193 aa12.79□□□□□ -0.36
TMEM39B-203ENST00000441402 GPR61Q9BZJ8 451 aa12.79□□□□□ -0.36
TMEM39B-203ENST00000441402 NAT8BQ9UHF3 227 aa12.79□□□□□ -0.36
TMEM39B-203ENST00000441402 TRBV7-9A0A0J9YWB2 115 aa12.78□□□□□ -0.36
TMEM39B-203ENST00000441402 ADARB2-AS1A8MUL3 147 aa12.78□□□□□ -0.36
TMEM39B-203ENST00000441402 PHOX2AO14813 284 aa12.78□□□□□ -0.36
TMEM39B-203ENST00000441402 CA1P00915 261 aaPredicted RBP12.78□□□□□ -0.36
TMEM39B-203ENST00000441402 TRGC2P03986 189 aa12.78□□□□□ -0.36
TMEM39B-203ENST00000441402 SRSF2Q01130 221 aaKnown RBP12.78□□□□□ -0.36
TMEM39B-203ENST00000441402 COX19Q49B96 90 aa12.78□□□□□ -0.36
TMEM39B-203ENST00000441402 FAM162BQ5T6X4 162 aa12.78□□□□□ -0.36
TMEM39B-203ENST00000441402 OR8A1Q8NGG7 326 aa12.78□□□□□ -0.36
TMEM39B-203ENST00000441402 NUP35Q8NFH5 326 aa12.78□□□□□ -0.36
TMEM39B-203ENST00000441402 NEU1Q99519 415 aa12.78□□□□□ -0.36
TMEM39B-203ENST00000441402 A0A1W2PRX2 142 aa12.77□□□□□ -0.37
TMEM39B-203ENST00000441402 FABP5P3A8MUU1 101 aa12.77□□□□□ -0.37
TMEM39B-203ENST00000441402 SNRPD3P62318 126 aaKnown RBP12.77□□□□□ -0.37
TMEM39B-203ENST00000441402 HIST2H2BDQ6DRA6 164 aa12.77□□□□□ -0.37
TMEM39B-203ENST00000441402 RASL11AQ6T310 242 aa12.77□□□□□ -0.37
TMEM39B-203ENST00000441402 OR2D3Q8NGH3 330 aa12.77□□□□□ -0.37
TMEM39B-203ENST00000441402 SAV1Q9H4B6 383 aaPredicted RBP12.77□□□□□ -0.37
TMEM39B-203ENST00000441402 CUBNO60494 3623 aa12.76□□□□□ -0.37
TMEM39B-203ENST00000441402 HIGD1CA8MV81 97 aa12.76□□□□□ -0.37
TMEM39B-203ENST00000441402 SH2D1AO60880 128 aa12.76□□□□□ -0.37
TMEM39B-203ENST00000441402 ZNF80P51504 273 aaPredicted RBP12.76□□□□□ -0.37
TMEM39B-203ENST00000441402 DEFB114Q30KQ6 69 aa12.76□□□□□ -0.37
TMEM39B-203ENST00000441402 NDUFA11Q86Y39 141 aa12.76□□□□□ -0.37
TMEM39B-203ENST00000441402 WFDC3Q8IUB2 231 aa12.76□□□□□ -0.37
TMEM39B-203ENST00000441402 FAM19A4Q96LR4 140 aa12.76□□□□□ -0.37
TMEM39B-203ENST00000441402 TRAV25A0A0B4J276 109 aa12.75□□□□□ -0.37
TMEM39B-203ENST00000441402 TCL1AP56279 114 aa12.75□□□□□ -0.37
TMEM39B-203ENST00000441402 GTSF1Q8WW33 167 aa12.75□□□□□ -0.37
TMEM39B-203ENST00000441402 GNB1LQ9BYB4 327 aa12.75□□□□□ -0.37
TMEM39B-203ENST00000441402 SELENOKQ9Y6D0 94 aa12.75□□□□□ -0.37
TMEM39B-203ENST00000441402 LOC105371267A0A1B0GV96 52 aa12.74□□□□□ -0.37
TMEM39B-203ENST00000441402 XKRY2A2RUG3 117 aa12.74□□□□□ -0.37
TMEM39B-203ENST00000441402 KRTAP10-3P60369 221 aa12.74□□□□□ -0.37
TMEM39B-203ENST00000441402 RPS20P60866 119 aaKnown RBP12.74□□□□□ -0.37
TMEM39B-203ENST00000441402 HIST1H1AQ02539 215 aaPredicted RBP12.74□□□□□ -0.37
TMEM39B-203ENST00000441402 ACTL10Q5JWF8 245 aa12.74□□□□□ -0.37
TMEM39B-203ENST00000441402 RBPMS2Q6ZRY4 209 aaKnown RBP12.74□□□□□ -0.37
TMEM39B-203ENST00000441402 ATP5L2Q7Z4Y8 100 aa12.74□□□□□ -0.37
TMEM39B-203ENST00000441402 ZFP82Q8N141 532 aa12.74□□□□□ -0.37
TMEM39B-203ENST00000441402 TMEM189A5PLL7 270 aa12.73□□□□□ -0.37
TMEM39B-203ENST00000441402 ZNF705DP0CH99 300 aaPredicted RBP12.73□□□□□ -0.37
TMEM39B-203ENST00000441402 ZNF705BP0CI00 300 aaPredicted RBP12.73□□□□□ -0.37
TMEM39B-203ENST00000441402 WDR73Q6P4I2 378 aa12.73□□□□□ -0.37
TMEM39B-203ENST00000441402 APRG1Q8IVJ8 170 aa12.73□□□□□ -0.37
TMEM39B-203ENST00000441402 FRZBQ92765 325 aa12.73□□□□□ -0.37
TMEM39B-203ENST00000441402 MT-ND6P03923 174 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 ZNF688P0C7X2 276 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 CRISP2P16562 243 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 TFPI2P48307 235 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms