RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 COL27A1Q8IZC6 1860 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-204ENST00000438964 TEX22C9J3V5 150 aa10.48□□□□□ -0.73
ACTN1-204ENST00000438964 J3KRW8 73 aa10.48□□□□□ -0.73
ACTN1-204ENST00000438964 RNF125Q96EQ8 232 aa10.48□□□□□ -0.73
ACTN1-204ENST00000438964 IGLV3-9A0A075B6K5 115 aa10.47□□□□□ -0.73
ACTN1-204ENST00000438964 A0A1B0GV72 72 aa10.47□□□□□ -0.73
ACTN1-204ENST00000438964 NDUFB3O43676 98 aa10.47□□□□□ -0.73
ACTN1-204ENST00000438964 SRSF8Q9BRL6 282 aaKnown RBP10.47□□□□□ -0.73
ACTN1-204ENST00000438964 CYSLTR1Q9Y271 337 aa10.47□□□□□ -0.73
ACTN1-204ENST00000438964 SMIM17P0DL12 118 aa10.47□□□□□ -0.73
ACTN1-204ENST00000438964 ZNF418Q8TF45 676 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-204ENST00000438964 UFC1Q9Y3C8 167 aa10.47□□□□□ -0.73
ACTN1-204ENST00000438964 IGHV3-49A0A0A0MS15 119 aa10.47□□□□□ -0.73
ACTN1-204ENST00000438964 IGHG3P01860 377 aa10.47□□□□□ -0.73
ACTN1-204ENST00000438964 TRGV3P03979 118 aa10.47□□□□□ -0.73
ACTN1-204ENST00000438964 ZNF491Q8N8L2 437 aa10.47□□□□□ -0.73
ACTN1-204ENST00000438964 SHANK2-AS3Q9BTD1 123 aa10.47□□□□□ -0.73
ACTN1-204ENST00000438964 I3L2K1 104 aa10.46□□□□□ -0.73
ACTN1-204ENST00000438964 TNFRSF6BO95407 300 aa10.46□□□□□ -0.73
ACTN1-204ENST00000438964 GATA4P43694 442 aa10.46□□□□□ -0.73
ACTN1-204ENST00000438964 CRYBA4P53673 196 aa10.46□□□□□ -0.73
ACTN1-204ENST00000438964 C12orf74Q32Q52 190 aa10.46□□□□□ -0.73
ACTN1-204ENST00000438964 FOXI2Q6ZQN5 318 aa10.46□□□□□ -0.73
ACTN1-204ENST00000438964 ZNF493Q6ZR52 646 aa10.46□□□□□ -0.73
ACTN1-204ENST00000438964 RNF182Q8N6D2 247 aa10.46□□□□□ -0.73
ACTN1-204ENST00000438964 MAP1LC3AQ9H492 121 aa10.46□□□□□ -0.73
ACTN1-204ENST00000438964 AAMDCQ9H7C9 122 aa10.46□□□□□ -0.73
ACTN1-204ENST00000438964 COL6A6A6NMZ7 2263 aa10.46□□□□□ -0.74
ACTN1-204ENST00000438964 HOXB4P17483 251 aaPredicted RBP10.46□□□□□ -0.74
ACTN1-204ENST00000438964 GATA3P23771 443 aa10.46□□□□□ -0.74
ACTN1-204ENST00000438964 CD40P25942 277 aa10.46□□□□□ -0.74
ACTN1-204ENST00000438964 LOXP28300 417 aaPredicted RBP10.46□□□□□ -0.74
ACTN1-204ENST00000438964 DEFB109BQ30KR1 87 aa10.46□□□□□ -0.74
ACTN1-204ENST00000438964 C1orf210Q8IVY1 113 aa10.46□□□□□ -0.74
ACTN1-204ENST00000438964 LINC00574Q9H8X3 128 aa10.46□□□□□ -0.74
ACTN1-204ENST00000438964 CUL9Q8IWT3 2517 aa10.45□□□□□ -0.74
ACTN1-204ENST00000438964 SIVA1O15304 175 aa10.45□□□□□ -0.74
ACTN1-204ENST00000438964 IGHV1-8P0DP01 117 aa10.45□□□□□ -0.74
ACTN1-204ENST00000438964 GAGE13Q4V321 117 aa10.45□□□□□ -0.74
ACTN1-204ENST00000438964 RNF185Q96GF1 192 aa10.45□□□□□ -0.74
ACTN1-204ENST00000438964 SPTAN1Q13813 2472 aaKnown RBP10.45□□□□□ -0.74
ACTN1-204ENST00000438964 TLN1Q9Y490 2541 aaKnown RBP10.45□□□□□ -0.74
ACTN1-204ENST00000438964 C19orf67A6NJJ6 358 aa10.45□□□□□ -0.74
ACTN1-204ENST00000438964 DPF1Q92782 380 aa10.45□□□□□ -0.74
ACTN1-204ENST00000438964 INS-IGF2F8WCM5 200 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 K7EIM0 57 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 BMI1P35226 326 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 SYT8Q8NBV8 401 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 U3KQK5 164 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 CEP295Q9C0D2 2601 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 PTPRZ1P23471 2315 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-204ENST00000438964 LOC107984156A0A0G2JMH3 177 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 PRAC2D3DTV9 90 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 E9PLD3 99 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 C3orf36Q3SXR2 165 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 ARL17AQ8IVW1 177 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 H3BRN7 92 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 NDUFS8O00217 210 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 EMP1P54849 157 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 PRR25Q96S07 402 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 FAM215AQ9Y5M1 114 aa10.44□□□□□ -0.74
ACTN1-204ENST00000438964 IGHV1-3A0A0C4DH29 117 aa10.43□□□□□ -0.74
ACTN1-204ENST00000438964 DPM2O94777 84 aa10.43□□□□□ -0.74
ACTN1-204ENST00000438964 APOMO95445 188 aa10.43□□□□□ -0.74
ACTN1-204ENST00000438964 MT-ATP8P03928 68 aa10.43□□□□□ -0.74
ACTN1-204ENST00000438964 TEX36Q5VZQ5 186 aa10.43□□□□□ -0.74
ACTN1-204ENST00000438964 ZNF575Q86XF7 245 aa10.43□□□□□ -0.74
ACTN1-204ENST00000438964 GEMIN7Q9H840 131 aaKnown RBP10.43□□□□□ -0.74
ACTN1-204ENST00000438964 TMEM14CQ9P0S9 112 aa10.43□□□□□ -0.74
ACTN1-204ENST00000438964 C17orf100A8MU93 164 aa10.42□□□□□ -0.74
ACTN1-204ENST00000438964 CD59P13987 128 aa10.42□□□□□ -0.74
ACTN1-204ENST00000438964 FHL3Q13643 280 aa10.42□□□□□ -0.74
ACTN1-204ENST00000438964 HES1Q14469 280 aa10.42□□□□□ -0.74
ACTN1-204ENST00000438964 ADIPOQQ15848 244 aa10.42□□□□□ -0.74
ACTN1-204ENST00000438964 ANXA2RQ3ZCQ2 193 aa10.42□□□□□ -0.74
ACTN1-204ENST00000438964 ZFHX2Q9C0A1 2572 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-204ENST00000438964 MC5RP33032 325 aa10.42□□□□□ -0.74
ACTN1-204ENST00000438964 SCGB2A2Q13296 93 aa10.42□□□□□ -0.74
ACTN1-204ENST00000438964 DTX2Q86UW9 622 aa10.42□□□□□ -0.74
ACTN1-204ENST00000438964 GFRALQ6UXV0 394 aa10.42□□□□□ -0.74
ACTN1-204ENST00000438964 ZFP2Q6ZN57 461 aa10.42□□□□□ -0.74
ACTN1-204ENST00000438964 RPEQ96AT9 228 aa10.42□□□□□ -0.74
ACTN1-204ENST00000438964 PGPEP1Q9NXJ5 209 aa10.42□□□□□ -0.74
ACTN1-204ENST00000438964 A0A1B0GW15 77 aa10.41□□□□□ -0.74
ACTN1-204ENST00000438964 TMEM178BH3BS89 294 aa10.41□□□□□ -0.74
ACTN1-204ENST00000438964 J3QR89 54 aa10.41□□□□□ -0.74
ACTN1-204ENST00000438964 LY6HO94772 140 aa10.41□□□□□ -0.74
ACTN1-204ENST00000438964 BSPH1Q075Z2 132 aa10.41□□□□□ -0.74
ACTN1-204ENST00000438964 Q6AWC8 147 aa10.41□□□□□ -0.74
ACTN1-204ENST00000438964 RALYQ9UKM9 306 aaKnown RBP10.41□□□□□ -0.74
ACTN1-204ENST00000438964 ANKHD1Q8IWZ3 2542 aaKnown RBP10.41□□□□□ -0.74
ACTN1-204ENST00000438964 F8W1H4 67 aa10.41□□□□□ -0.74
ACTN1-204ENST00000438964 MRPS12O15235 138 aaKnown RBP10.41□□□□□ -0.74
ACTN1-204ENST00000438964 PSMB2P49721 201 aa10.41□□□□□ -0.74
ACTN1-204ENST00000438964 IL17RELQ6ZVW7 336 aa10.41□□□□□ -0.74
ACTN1-204ENST00000438964 NFE4Q86UQ8 179 aa10.41□□□□□ -0.74
ACTN1-204ENST00000438964 COLQQ9Y215 455 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-204ENST00000438964 HLA-DRB4P13762 266 aa10.4□□□□□ -0.74
ACTN1-204ENST00000438964 DYNAPQ8N1N2 210 aa10.4□□□□□ -0.74
ACTN1-204ENST00000438964 TTC9CQ8N5M4 171 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms