RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 SONP18583 2426 aaKnown RBP1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 TET1Q8NFU7 2136 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 ASCC3Q8N3C0 2202 aaKnown RBP1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 PTPRFP10586 1907 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 ANAPC1Q9H1A4 1944 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 TRBV6-5A0A0K0K1A5 114 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 OR2B3O76000 313 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 ERP29P30040 261 aaKnown RBP1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 SERPINB9P50453 376 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 Q1T7F1 81 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 Q6Q795 121 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 DPPA3Q6W0C5 159 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 TRAPPC6BQ86SZ2 158 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 ZNF439Q8NDP4 499 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 OR11H6Q8NGC7 330 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 C2orf50Q96LR7 162 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 PAIP2Q9BPZ3 127 aaKnown RBP1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 TVP23BQ9NYZ1 205 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 ANKRD36CQ5JPF3 1778 aa1.28□□□□□ -2.2
TRAPPC13-204ENST00000438419 ARFGEF3Q5TH69 2177 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 HERC2O95714 4834 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 BSNQ9UPA5 3926 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 TANC1Q9C0D5 1861 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 GOLGA4Q13439 2230 aaKnown RBP1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 SPAG17Q6Q759 2223 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 IGKV2-29A2NJV5 120 aaPredicted RBP1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 CLDN25C9JDP6 229 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 SHBGP04278 402 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 RPSAP08865 295 aaKnown RBP1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 HTR1AP08908 422 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 CRYGAP11844 174 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 NNATQ16517 81 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 LINC01554Q52M75 96 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 KHDC3LQ587J8 217 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 DHRS4L2Q6PKH6 230 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 SIGLECL1Q8N7X8 197 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 OR5A1Q8NGJ0 315 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 PARVBQ9HBI1 364 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 OSTCQ9NRP0 149 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 STOML2Q9UJZ1 356 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 LHFPL6Q9Y693 200 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 NUP98P52948 1817 aa1.27□□□□□ -2.21
TRAPPC13-204ENST00000438419 ZNF236Q9UL36 1845 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 A0A0D9SG52 128 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 TRAPPC13A5PLN9 417 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 TMEM212A6NML5 194 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 C1orf196B1AJZ1 125 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 C5orf67F2Z3F1 127 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 F8W036 122 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 NEFHP12036 1026 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 HLA-EP13747 358 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 YPEL3P61236 119 aaPredicted RBP1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 Q6ZQT0 140 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 GOLT1AQ6ZVE7 132 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 LCA10Q71F78 164 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 RPS19BP1Q86WX3 136 aaKnown RBP1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 YIPF3Q9GZM5 350 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 IL20Q9NYY1 176 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 MED23Q9ULK4 1368 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 PRKDCP78527 4128 aaKnown RBP1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 FCGBPQ9Y6R7 5405 aaPredicted RBP1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 MYH7BA7E2Y1 1941 aa1.26□□□□□ -2.21
TRAPPC13-204ENST00000438419 IGKV1D-42A0A075B6H8 117 aa1.25□□□□□ -2.21
TRAPPC13-204ENST00000438419 HMGB3O15347 200 aaKnown RBP1.25□□□□□ -2.21
TRAPPC13-204ENST00000438419 TCL1BO95988 128 aa1.25□□□□□ -2.21
TRAPPC13-204ENST00000438419 CTSDP07339 412 aaPredicted RBP1.25□□□□□ -2.21
TRAPPC13-204ENST00000438419 SPI1P17947 270 aa1.25□□□□□ -2.21
TRAPPC13-204ENST00000438419 SRIP30626 198 aa1.25□□□□□ -2.21
TRAPPC13-204ENST00000438419 PPP1R2P41236 205 aa1.25□□□□□ -2.21
TRAPPC13-204ENST00000438419 PPP1R2P3Q6NXS1 205 aa1.25□□□□□ -2.21
TRAPPC13-204ENST00000438419 LINC00471Q8N535 108 aa1.25□□□□□ -2.21
TRAPPC13-204ENST00000438419 OR4E2Q8NGC2 313 aa1.25□□□□□ -2.21
TRAPPC13-204ENST00000438419 AP3S1Q92572 193 aa1.25□□□□□ -2.21
TRAPPC13-204ENST00000438419 GPR146Q96CH1 333 aa1.25□□□□□ -2.21
TRAPPC13-204ENST00000438419 DOCK1Q14185 1865 aa1.25□□□□□ -2.21
TRAPPC13-204ENST00000438419 A0A087X0T9 212 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 TRAV4A0A0B4J268 109 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 J3QRK9 145 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 CYB5BO43169 146 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 OR5F1O95221 314 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 COX6A1P12074 109 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 FKBP2P26885 142 aaKnown RBP1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 ATP5G3P48201 142 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 PIGPP57054 158 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 HSPE1P61604 102 aaKnown RBP1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 RHOBP62745 196 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 RHEBQ15382 184 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 LYRM7Q5U5X0 104 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 ZNF826PQ6ZT77 177 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 DEFB119Q8N690 84 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 OR8D4Q8NGM9 314 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 WFDC5Q8TCV5 224 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 FAM172AQ8WUF8 416 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 ZNF469Q96JG9 3925 aaPredicted RBP1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 ALPK2Q86TB3 2170 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 EML6Q6ZMW3 1958 aa1.24□□□□□ -2.21
TRAPPC13-204ENST00000438419 TRBV19A0A075B6N1 114 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 C19orf84I3L1E1 186 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 SULT1B1O43704 296 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 OR4E1P0C645 316 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms