RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 TEX36Q5VZQ5 186 aa9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 SEM1Q6ZVN7 128 aa9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 GLMPQ8WWB7 406 aa9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 PRR25Q96S07 402 aa9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 TGFAP01135 160 aa9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 EFNA4P52798 201 aa9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 PRSS33Q8NF86 280 aa9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 UFC1Q9Y3C8 167 aa9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 TRBV6-1A0A0K0K1D8 114 aa9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 K7EM74 188 aa9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 PSMB2P49721 201 aa9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 RNF185Q96GF1 192 aa9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 NXT2Q9NPJ8 142 aaKnown RBP9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 PCNX1Q96RV3 2341 aa9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 ZGRF1Q86YA3 2104 aa9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 IGHV1-8P0DP01 117 aa9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 RRN3P1Q2M238 152 aa9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 PTH2Q96A98 100 aa9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 PGPEP1Q9NXJ5 209 aa9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 ATP5LO75964 103 aa9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 LYPD1Q8N2G4 141 aa9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 CTSZQ9UBR2 303 aa9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 MALRD1Q5VYJ5 2156 aa9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 ADGRG4Q8IZF6 3080 aa9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 HOXA3O43365 443 aaPredicted RBP9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 MT-ATP8P03928 68 aa9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 CD40P25942 277 aa9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 ERCC8Q13216 396 aa9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 ZMAT4Q9H898 229 aa9.03□□□□□ -0.96
HMGCS1-202ENST00000433297 K7EIM0 57 aa9.02□□□□□ -0.97
HMGCS1-202ENST00000433297 FOXI1Q12951 378 aa9.02□□□□□ -0.97
HMGCS1-202ENST00000433297 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
HMGCS1-202ENST00000433297 DTX2Q86UW9 622 aa9.02□□□□□ -0.97
HMGCS1-202ENST00000433297 ZNF502Q8TBZ5 544 aa9.02□□□□□ -0.97
HMGCS1-202ENST00000433297 LAMA5O15230 3695 aa9.01□□□□□ -0.97
HMGCS1-202ENST00000433297 IGHV1-3A0A0C4DH29 117 aa9.01□□□□□ -0.97
HMGCS1-202ENST00000433297 C17orf100A8MU93 164 aa9.01□□□□□ -0.97
HMGCS1-202ENST00000433297 LOXP28300 417 aaPredicted RBP9.01□□□□□ -0.97
HMGCS1-202ENST00000433297 H3BVH4 76 aa9.01□□□□□ -0.97
HMGCS1-202ENST00000433297 TRAV17A0A0B4J275 112 aa9.01□□□□□ -0.97
HMGCS1-202ENST00000433297 OR11H12B2RN74 326 aa9.01□□□□□ -0.97
HMGCS1-202ENST00000433297 SRSF9Q13242 221 aaKnown RBP eCLIP9.01□□□□□ -0.97
HMGCS1-202ENST00000433297 SCGB1D4Q6XE38 83 aa9.01□□□□□ -0.97
HMGCS1-202ENST00000433297 OR11H1Q8NG94 326 aa9.01□□□□□ -0.97
HMGCS1-202ENST00000433297 OR11H2Q8NH07 326 aa9.01□□□□□ -0.97
HMGCS1-202ENST00000433297 LINC01549A6NIU2 74 aa9□□□□□ -0.97
HMGCS1-202ENST00000433297 TCTEX1D4Q5JR98 221 aa9□□□□□ -0.97
HMGCS1-202ENST00000433297 LINC00311Q8N616 119 aa9□□□□□ -0.97
HMGCS1-202ENST00000433297 PIFOQ8TCI5 191 aa9□□□□□ -0.97
HMGCS1-202ENST00000433297 PRO0461Q9UI25 63 aa9□□□□□ -0.97
HMGCS1-202ENST00000433297 TMEM178BH3BS89 294 aa9□□□□□ -0.97
HMGCS1-202ENST00000433297 TRGV3P03979 118 aa9□□□□□ -0.97
HMGCS1-202ENST00000433297 C1orf210Q8IVY1 113 aa9□□□□□ -0.97
HMGCS1-202ENST00000433297 CNOT1A5YKK6 2376 aaKnown RBP9□□□□□ -0.97
HMGCS1-202ENST00000433297 GATA3P23771 443 aa9□□□□□ -0.97
HMGCS1-202ENST00000433297 HES1Q14469 280 aa9□□□□□ -0.97
HMGCS1-202ENST00000433297 ZFP2Q6ZN57 461 aa9□□□□□ -0.97
HMGCS1-202ENST00000433297 TNRC18O15417 2968 aaPredicted RBP9□□□□□ -0.97
HMGCS1-202ENST00000433297 FABP5P3A8MUU1 101 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 SHISA9B4DS77 424 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 MRPS12O15235 138 aaKnown RBP8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 IGLC6P0CF74 106 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 PSMG4Q5JS54 123 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 PVRIGQ6DKI7 326 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 GFRALQ6UXV0 394 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 NFE4Q86UQ8 179 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 DEFB104AQ8WTQ1 72 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 IGHV3OR16-13A0A075B7E8 117 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 IGHV3-74A0A0B4J1X5 117 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 IGHV3-66A0A0C4DH42 116 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 CRYGBP07316 175 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 SRSF1Q07955 248 aaKnown RBP eCLIP8.99□□□□□ -0.972e-7■■■■□ 22.5
HMGCS1-202ENST00000433297 LAGE3Q14657 143 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 Q8N8P6 123 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 ZNF48Q96MX3 618 aaPredicted RBP8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 VKORC1Q9BQB6 163 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 SRSF8Q9BRL6 282 aaKnown RBP8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 CEACAM4O75871 244 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 HLA-DRB4P13762 266 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 RNF183Q96D59 192 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 SS18L2Q9UHA2 77 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 HLA-DRB4X5D2U9 266 aa8.99□□□□□ -0.97
HMGCS1-202ENST00000433297 LINC01548A6NM66 108 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 SPRY2O43597 315 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 XGP55808 180 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 ADIPOQQ15848 244 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 TMEM155Q4W5P6 130 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 C1QTNF4Q9BXJ3 329 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 LYNX1G3V0Z9 82 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 J3KRW8 73 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 LYNX1P0DP58 116 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 DEFB109BQ30KR1 87 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 RNF182Q8N6D2 247 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 CDIP1Q9H305 208 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 DYNLRB1Q9NP97 96 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 GVINP1Q7Z2Y8 2422 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 CACNA1BQ00975 2339 aa8.98□□□□□ -0.97
HMGCS1-202ENST00000433297 A0A087WX48 190 aa8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 MYMXA0A1B0GTQ4 84 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms