RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 ZNF705DP0CH99 300 aaPredicted RBP2.33□□□□□ -2.04
PTPN4-204ENST00000431283 ZNF705BP0CI00 300 aaPredicted RBP2.33□□□□□ -2.04
PTPN4-204ENST00000431283 RD3LP0DJH9 198 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 SLC25A4P12235 298 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 HLA-DRB4P13762 266 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 HLA-DMAP28067 261 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 OR10J1P30954 320 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 SDC2P34741 201 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 PRSS3P35030 304 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 HRH1P35367 487 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 HTR2BP41595 481 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 RPL5P46777 297 aaKnown RBP2.33□□□□□ -2.04
PTPN4-204ENST00000431283 AKR1C2P52895 323 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 AQP4P55087 323 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 CCL18P55774 89 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 TAS2R20P59543 309 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 YPEL3P61236 119 aaPredicted RBP2.33□□□□□ -2.04
PTPN4-204ENST00000431283 DAD1P61803 113 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 MXD1Q05195 221 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 CLINT1Q14677 625 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 OXA1LQ15070 435 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 RRN3P1Q2M238 152 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 TRIM16LQ309B1 348 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 DEFB116Q30KQ4 102 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 C5orf47Q569G3 176 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 SPINK9Q5DT21 86 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 TMEM69Q5SWH9 247 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 FAM222AQ5U5X8 452 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 SAMD13Q5VXD3 122 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 SPATA31B1PQ5VZV4 182 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 ETFRF1Q6IPR1 90 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 EBLN2Q6P2I7 272 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 ZNF705AQ6ZN79 300 aaPredicted RBP2.33□□□□□ -2.04
PTPN4-204ENST00000431283 C6orf223Q8N319 242 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 OR4B1Q8NGF8 309 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 OR1S2Q8NGQ3 325 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 COQ8AQ8NI60 647 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 RNASE11Q8TAA1 199 aaKnown RBP2.33□□□□□ -2.04
PTPN4-204ENST00000431283 MRGPRFQ96AM1 343 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 SEC22AQ96IW7 307 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 LINC00052Q96N35 136 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 TMEM208Q9BTX3 173 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 CACFD1Q9UGQ2 172 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 HLA-DRB4X5D2U9 266 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 HSPG2P98160 4391 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 LRP1BQ9NZR2 4599 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 LOC100506127A0A0U1RQW1 187 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 NBDYA0A0U1RRE5 68 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 F5H768 121 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 B3GALNT1O75752 331 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 IL4P05112 153 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 FABP1P07148 127 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 S100A7P31151 101 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 RCVRNP35243 200 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 ETV6P41212 452 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 GABARAPL2P60520 117 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 SPCS3P61009 180 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 PSG9Q00887 426 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 TIGITQ495A1 244 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 UBE2NLQ5JXB2 153 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 FOXI2Q6ZQN5 318 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 SPATA12Q7Z6I5 190 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 OR5H6Q8NGV6 325 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 RNASEH2CQ8TDP1 164 aaKnown RBP2.32□□□□□ -2.04
PTPN4-204ENST00000431283 PPP1R14BQ96C90 147 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 RPUSD4Q96CM3 377 aaKnown RBP2.32□□□□□ -2.04
PTPN4-204ENST00000431283 CNBD2Q96M20 576 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.32□□□□□ -2.04
PTPN4-204ENST00000431283 COPZ2Q9P299 210 aa2.32□□□□□ -2.04
PTPN4-204ENST00000431283 YTHDF2Q9Y5A9 579 aaKnown RBP2.32□□□□□ -2.04
PTPN4-204ENST00000431283 APOBP04114 4563 aaKnown RBP2.31□□□□□ -2.04
PTPN4-204ENST00000431283 C3orf85A0A1B0GTC6 90 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 LYRM9A8MSI8 78 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 CEBPZOSA8MTT3 80 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 GABARAPH6UMI1 98 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 ISLRO14498 428 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 ADAP1O75689 374 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 GABARAPO95166 117 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 TNFAIP8O95379 198 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 IGKV1-39P01597 117 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 IGKV1D-39P04432 117 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 ATP5G1P05496 136 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 IGLC1P0CG04 106 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 DEFB130BP0DP73 79 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 DEFB130AP0DP74 79 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 RNASE2P10153 161 aaKnown RBP2.31□□□□□ -2.04
PTPN4-204ENST00000431283 CRISP2P16562 243 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 ATP5G3P48201 142 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 PSMB3P49720 205 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 RND2P52198 227 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 PIGPP57054 158 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 FXYD7P58549 80 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 B2MP61769 119 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 TTC32Q5I0X7 151 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 C1orf194Q5T5A4 169 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 PRSS54Q6PEW0 395 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 OR8I2Q8N0Y5 310 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 OR4C16Q8NGL9 310 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 OR52E5Q8NH55 327 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms