RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 A8MXK9 166 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 K7EQD1 137 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 FAM236CP0DP71 79 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 HERVK_113P63121 156 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 DAZ2Q13117 558 aaKnown RBP3.55□□□□□ -1.84
LRRK2-204ENST00000430804 LINC01590Q5TEZ4 76 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 AMTNQ6UX39 209 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 MIR17HGQ75NE6 70 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 DAZ4Q86SG3 579 aaKnown RBP3.55□□□□□ -1.84
LRRK2-204ENST00000430804 COQ2Q96H96 371 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 DAZ3Q9NR90 486 aaKnown RBP3.55□□□□□ -1.84
LRRK2-204ENST00000430804 LTBP1Q14766 1721 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 A0A0U1RRA0 63 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 A0A1W2PPI3 338 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 H3BQ85 93 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 CXCL5P42830 114 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 BLCAPP62952 87 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 ATXN8Q156A1 80 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 LINC00114Q6XXX2 140 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 SDHCQ99643 169 aaPredicted RBP3.55□□□□□ -1.84
LRRK2-204ENST00000430804 SCRT1Q9BWW7 348 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 ACACBO00763 2458 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 TRBV5-3A0A0A0MS03 114 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 IGKV1D-43A0A0B4J1Z2 117 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 TFF1P04155 84 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 IFITM3Q01628 133 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 LINC01551Q86U37 167 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 TIMM21Q9BVV7 248 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 PRR13Q9NZ81 148 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 DOCK3Q8IZD9 2030 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 SIPA1L3O60292 1781 aaPredicted RBP3.55□□□□□ -1.84
LRRK2-204ENST00000430804 TRBV6-6A0A0A6YYG2 114 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 FNDC10F2Z333 226 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 XCL1P47992 114 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 GAGE2EQ4V326 116 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 GAGE2DQ9UEU5 116 aa3.55□□□□□ -1.84
LRRK2-204ENST00000430804 DOCK6Q96HP0 2047 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.54□□□□□ -1.84
LRRK2-204ENST00000430804 IGKV2-24A0A0C4DH68 120 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 C9orf47Q6ZRZ4 202 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 GSN-AS1Q9NRJ2 163 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 A0A0A6YYD4 124 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 CTSGP08311 255 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 FUSP35637 526 aaKnown RBP eCLIP3.54□□□□□ -1.84
LRRK2-204ENST00000430804 BCL6BQ8N143 479 aaPredicted RBP3.54□□□□□ -1.84
LRRK2-204ENST00000430804 C14orf178Q8N769 122 aaPredicted RBP3.54□□□□□ -1.84
LRRK2-204ENST00000430804 ZNF491Q8N8L2 437 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 LINC01006Q8NI28 216 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 ORAOV1Q8WV07 137 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 TET1Q8NFU7 2136 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 SEC61GP60059 68 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 REG3GQ6UW15 175 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 C5orf56Q8N8D9 126 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 FAM110AQ9BQ89 295 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 USF3Q68DE3 2245 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 ALPK2Q86TB3 2170 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 MUC21A0A0G2JKD1 596 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 MUC21A0A140T8X8 626 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 RS1O15537 224 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 FOXL2NBQ6ZUU3 175 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 C18orf15Q96N68 181 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 WFDC6Q9BQY6 131 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 SCRT2Q9NQ03 307 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 TMEM242Q9NWH2 141 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 KIAA1671Q9BY89 1806 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 DEFB4AO15263 64 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 NDUFA3O95167 84 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 CLPSL2Q6UWE3 100 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 ZFP2Q6ZN57 461 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 TMEM263Q8WUH6 116 aaKnown RBP3.54□□□□□ -1.84
LRRK2-204ENST00000430804 TMEM141Q96I45 108 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 LAMTOR2Q9Y2Q5 125 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 LENEPQ9Y5L5 61 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 KIAA1217Q5T5P2 1943 aa3.54□□□□□ -1.84
LRRK2-204ENST00000430804 BRCA1P38398 1863 aaKnown RBP3.54□□□□□ -1.84
LRRK2-204ENST00000430804 TRAV12-2A0A075B6T6 113 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 TRAV2A0A0B4J234 112 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 CHKB-CPT1BH3BT56 60 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 PFN2P35080 140 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 RPL23P62829 140 aaKnown RBP3.53□□□□□ -1.84
LRRK2-204ENST00000430804 NBASA2RRP1 2371 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 TRAV9-1A0A075B6T8 112 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 ARMS2P0C7Q2 107 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 HLA-DRB4P13762 266 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 UBE2D2P62837 147 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 GFI1BQ5VTD9 330 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 KLK12Q9UKR0 248 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 HLA-DRB4X5D2U9 266 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 DPM2O94777 84 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 LY6G6FQ5SQ64 297 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 COL5A1-AS1Q5SY13 56 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 NPBQ8NG41 125 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 C9orf85Q96MD7 179 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 RBM38Q9H0Z9 239 aaKnown RBP3.53□□□□□ -1.84
LRRK2-204ENST00000430804 CUL9Q8IWT3 2517 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 EDN2P20800 178 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 CD300CQ08708 224 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 NMSQ5H8A3 153 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 ATP5L2Q7Z4Y8 100 aa3.53□□□□□ -1.84
LRRK2-204ENST00000430804 MUC7Q8TAX7 377 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms