RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 C7orf33Q8WU49 177 aa4.66□□□□□ -1.66
UBR3-204ENST00000430321 G3V318 75 aa4.66□□□□□ -1.66
UBR3-204ENST00000430321 CBLN1P23435 193 aa4.66□□□□□ -1.66
UBR3-204ENST00000430321 AMN1Q8IY45 258 aa4.66□□□□□ -1.66
UBR3-204ENST00000430321 ZNRF2Q8NHG8 242 aa4.66□□□□□ -1.66
UBR3-204ENST00000430321 ZNF479Q96JC4 524 aa4.66□□□□□ -1.66
UBR3-204ENST00000430321 PTPRZ1P23471 2315 aaPredicted RBP4.66□□□□□ -1.66
UBR3-204ENST00000430321 GREB1Q4ZG55 1949 aa4.66□□□□□ -1.66
UBR3-204ENST00000430321 TRAV8-3A0A0A6YYJ7 113 aa4.66□□□□□ -1.66
UBR3-204ENST00000430321 RNF144BQ7Z419 303 aa4.66□□□□□ -1.66
UBR3-204ENST00000430321 B9D2Q9BPU9 175 aa4.66□□□□□ -1.66
UBR3-204ENST00000430321 CCDC88CQ9P219 2028 aa4.66□□□□□ -1.66
UBR3-204ENST00000430321 KIR2DL5BA0A0G2JN68 375 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 KIR2DL5BA0A0G2JPC4 375 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 KNCNA6PVL3 124 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 NDUFA1O15239 70 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 KIR2DL5AQ8N109 375 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 EXOC3-AS1Q8N2X6 119 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 C14orf178Q8N769 122 aaPredicted RBP4.65□□□□□ -1.66
UBR3-204ENST00000430321 GATD1Q8NB37 220 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 SSBP4Q9BWG4 385 aaPredicted RBP4.65□□□□□ -1.66
UBR3-204ENST00000430321 TDRD6O60522 2096 aaKnown RBP4.65□□□□□ -1.66
UBR3-204ENST00000430321 A0A087X0K7 114 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 PRSS29PA6NIE9 313 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 C2orf70A6NJV1 201 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 MMP23AO75900 390 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 CRYGCP07315 174 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 TAL2Q16559 108 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 ZNF491Q8N8L2 437 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 Q8NA96 180 aa4.65□□□□□ -1.66
UBR3-204ENST00000430321 IGKV1OR2-108A0A075B7D4 117 aa4.65□□□□□ -1.67
UBR3-204ENST00000430321 TRAV13-1A0A0B4J241 112 aa4.65□□□□□ -1.67
UBR3-204ENST00000430321 TRBV10-1A0A0K0K1A3 114 aa4.65□□□□□ -1.67
UBR3-204ENST00000430321 ETDCA0A1B0GVM5 59 aa4.65□□□□□ -1.67
UBR3-204ENST00000430321 P0DMU3 169 aa4.65□□□□□ -1.67
UBR3-204ENST00000430321 FAM231AP0DMU4 169 aa4.65□□□□□ -1.67
UBR3-204ENST00000430321 FAM231CP0DMU5 169 aa4.65□□□□□ -1.67
UBR3-204ENST00000430321 IGHV4-38-2P0DP08 117 aa4.65□□□□□ -1.67
UBR3-204ENST00000430321 WDR81Q562E7 1941 aa4.65□□□□□ -1.67
UBR3-204ENST00000430321 GYPEP15421 78 aa4.65□□□□□ -1.67
UBR3-204ENST00000430321 FOXA3P55318 350 aaPredicted RBP4.65□□□□□ -1.67
UBR3-204ENST00000430321 TMEM263Q8WUH6 116 aaKnown RBP4.65□□□□□ -1.67
UBR3-204ENST00000430321 UBE2WQ96B02 151 aa4.65□□□□□ -1.67
UBR3-204ENST00000430321 IGLC1P0CG04 106 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 PRR25Q96S07 402 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 ZNF706Q9Y5V0 76 aaPredicted RBP4.64□□□□□ -1.67
UBR3-204ENST00000430321 SDK1Q7Z5N4 2213 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 PCM1Q15154 2024 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 IGHV3-73A0A0B4J1V6 119 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 A0A1B0GVG6 124 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 PRSS47A8MTI9 375 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 D6R8Y8 96 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 NDUFB1O75438 58 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 GAGE6Q13070 117 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 MRPL52Q86TS9 123 aaKnown RBP4.64□□□□□ -1.67
UBR3-204ENST00000430321 ZC2HC1AQ96GY0 325 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 IGLV11-55A0A075B6I3 123 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 TRAV4A0A0B4J268 109 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 SLC17A3O00476 420 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 LY6G6DO95868 133 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 IGHG4P01861 327 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 OCC1Q8TAD7 63 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 FANCD2OSQ96PS1 177 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 U3KQE9 123 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 TFF1P04155 84 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 IGKV1-16P04430 117 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 HLA-DRB4P13762 266 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 PRB3Q04118 309 aaPredicted RBP4.64□□□□□ -1.67
UBR3-204ENST00000430321 ANXA2RQ3ZCQ2 193 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 SLC25A29Q8N8R3 303 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 C8orf49Q96NF6 230 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 RNF126Q9BV68 326 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 NOP10Q9NPE3 64 aaKnown RBP4.64□□□□□ -1.67
UBR3-204ENST00000430321 PRO0255Q9UI72 69 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 HLA-DRB4X5D2U9 266 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 MYO7AQ13402 2215 aa4.64□□□□□ -1.67
UBR3-204ENST00000430321 IGHV7-81A0A0B4J1V7 117 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 TRAV8-4A0A0B4J246 113 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 IGKV3D-20A0A0C4DH25 116 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 COX7A2LO14548 114 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 CFHR4Q92496 578 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 CAMK2N2Q96S95 79 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 TRBV24-1A0A075B6N3 115 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 RNF222A6NCQ9 220 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 Q6ZVH6 145 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 NIT1Q86X76 327 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 RNASE7Q9H1E1 156 aaKnown RBP4.63□□□□□ -1.67
UBR3-204ENST00000430321 CTSZQ9UBR2 303 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 ATG2BQ96BY7 2078 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 UBE2AP49459 152 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 UTF1Q5T230 341 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 TRBV6-1A0A0K0K1D8 114 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 SDHAF1A6NFY7 115 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 IGF1P05019 195 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 SLURP1P55000 103 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 BVES-AS1Q5T3Y7 98 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 SPANXCQ9NY87 97 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 LINC00474Q9P2X8 69 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 SOCS3O14543 225 aa4.63□□□□□ -1.67
UBR3-204ENST00000430321 FAM104BQ5XKR9 115 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms