RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 USP9YO00507 2555 aaPredicted RBP10.57□□□□□ -0.72
THBS3-202ENST00000428962 TACC2O95359 2948 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 IGHV4-30-2A0A087WSY4 118 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 IGHV1-24A0A0C4DH33 117 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 C20orf202A1L168 122 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 EREGO14944 169 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 BRI3O95415 125 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 HLA-DMBP28068 263 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 CTRLP40313 264 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 PRR31Q5SQ13 230 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 EBLN2Q6P2I7 272 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 TMEM70Q9BUB7 260 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 C2orf70A6NJV1 201 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 IGFL4Q6B9Z1 124 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 FER1L6-AS1Q8NA97 138 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 SNHG12Q9BXW3 62 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 HIF1ANQ9NWT6 349 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 U3KQE9 123 aa10.56□□□□□ -0.72
THBS3-202ENST00000428962 TMSB15BA0A087X1C1 80 aa10.55□□□□□ -0.72
THBS3-202ENST00000428962 FABP5P3A8MUU1 101 aa10.55□□□□□ -0.72
THBS3-202ENST00000428962 M0QZ24 198 aa10.55□□□□□ -0.72
THBS3-202ENST00000428962 LEPROTL1O95214 131 aa10.55□□□□□ -0.72
THBS3-202ENST00000428962 IGHV4-38-2P0DP08 117 aa10.55□□□□□ -0.72
THBS3-202ENST00000428962 ARL3P36405 182 aa10.55□□□□□ -0.72
THBS3-202ENST00000428962 USMG5Q96IX5 58 aa10.55□□□□□ -0.72
THBS3-202ENST00000428962 UQCR10Q9UDW1 63 aa10.55□□□□□ -0.72
THBS3-202ENST00000428962 SPTAN1Q13813 2472 aaKnown RBP10.55□□□□□ -0.72
THBS3-202ENST00000428962 A6NDX4 124 aa10.54□□□□□ -0.72
THBS3-202ENST00000428962 B4DSR2 109 aa10.54□□□□□ -0.72
THBS3-202ENST00000428962 H3BUX3 64 aa10.54□□□□□ -0.72
THBS3-202ENST00000428962 IGHG2P01859 326 aa10.54□□□□□ -0.72
THBS3-202ENST00000428962 GATA3P23771 443 aa10.54□□□□□ -0.72
THBS3-202ENST00000428962 HSPB8Q9UJY1 196 aa10.54□□□□□ -0.72
THBS3-202ENST00000428962 DOPEY1Q5JWR5 2465 aa10.54□□□□□ -0.72
THBS3-202ENST00000428962 IGHV3-66A0A0C4DH42 116 aa10.54□□□□□ -0.72
THBS3-202ENST00000428962 CYSRT1A8MQ03 144 aa10.54□□□□□ -0.72
THBS3-202ENST00000428962 CRXO43186 299 aaPredicted RBP10.54□□□□□ -0.72
THBS3-202ENST00000428962 HIST2H2BCQ6DN03 193 aa10.54□□□□□ -0.72
THBS3-202ENST00000428962 C8orf86Q6ZUL3 223 aa10.54□□□□□ -0.72
THBS3-202ENST00000428962 FA2HQ7L5A8 372 aa10.54□□□□□ -0.72
THBS3-202ENST00000428962 TRAV9-2A0A087WT02 112 aa10.53□□□□□ -0.72
THBS3-202ENST00000428962 NDUFA4O00483 81 aa10.53□□□□□ -0.72
THBS3-202ENST00000428962 IGLC6P0CF74 106 aa10.53□□□□□ -0.72
THBS3-202ENST00000428962 ZNF80P51504 273 aaPredicted RBP10.53□□□□□ -0.72
THBS3-202ENST00000428962 ERCC8Q13216 396 aa10.53□□□□□ -0.72
THBS3-202ENST00000428962 LY6EQ16553 131 aa10.53□□□□□ -0.72
THBS3-202ENST00000428962 LINC01559Q495D7 138 aa10.53□□□□□ -0.72
THBS3-202ENST00000428962 TMEM78Q5T7P6 136 aa10.53□□□□□ -0.72
THBS3-202ENST00000428962 FAM104BQ5XKR9 115 aa10.53□□□□□ -0.72
THBS3-202ENST00000428962 RNF182Q8N6D2 247 aa10.53□□□□□ -0.72
THBS3-202ENST00000428962 AP5S1Q9NUS5 200 aa10.53□□□□□ -0.72
THBS3-202ENST00000428962 U3KQK5 164 aa10.53□□□□□ -0.72
THBS3-202ENST00000428962 ZNF207O43670 478 aaKnown RBP10.52□□□□□ -0.73
THBS3-202ENST00000428962 ORM1P02763 201 aa10.52□□□□□ -0.73
THBS3-202ENST00000428962 SLC25A16P16260 332 aa10.52□□□□□ -0.73
THBS3-202ENST00000428962 HIST1H1AQ02539 215 aaPredicted RBP10.52□□□□□ -0.73
THBS3-202ENST00000428962 C9orf139Q6ZV77 190 aa10.52□□□□□ -0.73
THBS3-202ENST00000428962 ORMDL3Q8N138 153 aa10.52□□□□□ -0.73
THBS3-202ENST00000428962 PRSS3P2Q8NHM4 247 aa10.52□□□□□ -0.73
THBS3-202ENST00000428962 MAP1LC3CQ9BXW4 147 aa10.52□□□□□ -0.73
THBS3-202ENST00000428962 LINC00527Q9UJ94 153 aa10.52□□□□□ -0.73
THBS3-202ENST00000428962 ABCA2Q9BZC7 2435 aa10.52□□□□□ -0.73
THBS3-202ENST00000428962 IGHV3OR16-13A0A075B7E8 117 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 IGHV3-74A0A0B4J1X5 117 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 TMEM213A2RRL7 107 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 PRAC2D3DTV9 90 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 SYS1-DBNDD2H3BUS1 97 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 CSN3P07498 182 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 IGLC3P0DOY3 106 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 ZNF138P52744 262 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 GAGE1Q13065 139 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 GLMPQ8WWB7 406 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 CNFNQ9BYD5 112 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 MED13LQ71F56 2210 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 IGHV3-49A0A0A0MS15 119 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 TRAV8-2A0A0B4J237 113 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 D6R8Y8 96 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 PPIFP30405 207 aaKnown RBP10.51□□□□□ -0.73
THBS3-202ENST00000428962 TWIST1Q15672 202 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 IL17RELQ6ZVW7 336 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 ATOH7Q8N100 152 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 PRELID3AQ96N28 172 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 TMEM191AQ9H0A3 160 aa10.51□□□□□ -0.73
THBS3-202ENST00000428962 A0A0G2JLM5 398 aa10.5□□□□□ -0.73
THBS3-202ENST00000428962 PET117Q6UWS5 81 aa10.5□□□□□ -0.73
THBS3-202ENST00000428962 C9orf47Q6ZRZ4 202 aa10.5□□□□□ -0.73
THBS3-202ENST00000428962 AMN1Q8IY45 258 aa10.5□□□□□ -0.73
THBS3-202ENST00000428962 OR10AG1Q8NH19 301 aa10.5□□□□□ -0.73
THBS3-202ENST00000428962 C16orf92Q96LL3 132 aa10.5□□□□□ -0.73
THBS3-202ENST00000428962 OR4C46A6NHA9 309 aa10.49□□□□□ -0.73
THBS3-202ENST00000428962 HNRNPA3P51991 378 aaKnown RBP10.49□□□□□ -0.73
THBS3-202ENST00000428962 Q6ZN92 141 aa10.49□□□□□ -0.73
THBS3-202ENST00000428962 AGPAT4-IT1Q9H0P7 198 aa10.49□□□□□ -0.73
THBS3-202ENST00000428962 PF4V1P10720 104 aa10.49□□□□□ -0.73
THBS3-202ENST00000428962 MRPL51Q4U2R6 128 aaKnown RBP10.49□□□□□ -0.73
THBS3-202ENST00000428962 ANKRD39Q53RE8 183 aa10.49□□□□□ -0.73
THBS3-202ENST00000428962 ZNF580Q9UK33 172 aa10.49□□□□□ -0.73
THBS3-202ENST00000428962 LENEPQ9Y5L5 61 aa10.49□□□□□ -0.73
THBS3-202ENST00000428962 PPBPP02775 128 aa10.48□□□□□ -0.73
THBS3-202ENST00000428962 RPLP1P05386 114 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms