RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 C7orf71A4D174 169 aa12.89□□□□□ -0.35
PSPC1-202ENST00000427943 C17orf112F2Z3M2 114 aa12.89□□□□□ -0.35
PSPC1-202ENST00000427943 SLC25A5P05141 298 aaKnown RBP12.89□□□□□ -0.35
PSPC1-202ENST00000427943 NBEAP1P0C6P0 100 aa12.89□□□□□ -0.35
PSPC1-202ENST00000427943 RNF141Q8WVD5 230 aa12.89□□□□□ -0.35
PSPC1-202ENST00000427943 PHYHIPLQ96FC7 376 aa12.89□□□□□ -0.35
PSPC1-202ENST00000427943 PYGO2Q9BRQ0 406 aa12.89□□□□□ -0.35
PSPC1-202ENST00000427943 PAXXQ9BUH6 204 aa12.89□□□□□ -0.35
PSPC1-202ENST00000427943 MRPL32Q9BYC8 188 aaKnown RBP12.89□□□□□ -0.35
PSPC1-202ENST00000427943 SMIM3Q9BZL3 60 aa12.89□□□□□ -0.35
PSPC1-202ENST00000427943 AGPAT4-IT1Q9H0P7 198 aa12.89□□□□□ -0.35
PSPC1-202ENST00000427943 FUT9Q9Y231 359 aa12.89□□□□□ -0.35
PSPC1-202ENST00000427943 HSPB11Q9Y547 144 aa12.89□□□□□ -0.35
PSPC1-202ENST00000427943 A0A1B0GVY2 172 aa12.88□□□□□ -0.35
PSPC1-202ENST00000427943 PET100P0DJ07 73 aa12.88□□□□□ -0.35
PSPC1-202ENST00000427943 CD300CQ08708 224 aa12.88□□□□□ -0.35
PSPC1-202ENST00000427943 LINC00612Q8N6U2 182 aa12.88□□□□□ -0.35
PSPC1-202ENST00000427943 FXYD5Q96DB9 178 aa12.88□□□□□ -0.35
PSPC1-202ENST00000427943 FAM19A4Q96LR4 140 aa12.88□□□□□ -0.35
PSPC1-202ENST00000427943 LINC00477Q96M19 166 aa12.88□□□□□ -0.35
PSPC1-202ENST00000427943 KLLNB2CW77 178 aa12.87□□□□□ -0.35
PSPC1-202ENST00000427943 OR7C2O60412 319 aa12.87□□□□□ -0.35
PSPC1-202ENST00000427943 OR5I1Q13606 314 aa12.87□□□□□ -0.35
PSPC1-202ENST00000427943 FFAR4Q5NUL3 377 aa12.87□□□□□ -0.35
PSPC1-202ENST00000427943 VGLL1Q99990 258 aa12.87□□□□□ -0.35
PSPC1-202ENST00000427943 MBD2Q9UBB5 411 aa12.87□□□□□ -0.35
PSPC1-202ENST00000427943 RPL12P30050 165 aaKnown RBP12.86□□□□□ -0.35
PSPC1-202ENST00000427943 RNASE4P34096 147 aaKnown RBP12.86□□□□□ -0.35
PSPC1-202ENST00000427943 TMEM78Q5T7P6 136 aa12.86□□□□□ -0.35
PSPC1-202ENST00000427943 PRR9Q5T870 116 aa12.86□□□□□ -0.35
PSPC1-202ENST00000427943 C9orf47Q6ZRZ4 202 aa12.86□□□□□ -0.35
PSPC1-202ENST00000427943 FAT2Q9NYQ8 4349 aa12.86□□□□□ -0.35
PSPC1-202ENST00000427943 DNAH2Q9P225 4427 aa12.86□□□□□ -0.35
PSPC1-202ENST00000427943 A0A0J9YY99 117 aa12.85□□□□□ -0.35
PSPC1-202ENST00000427943 HOXA5P20719 270 aa12.85□□□□□ -0.35
PSPC1-202ENST00000427943 FAM3BP58499 235 aaPredicted RBP12.85□□□□□ -0.35
PSPC1-202ENST00000427943 UBE2L3P68036 154 aaKnown RBP12.85□□□□□ -0.35
PSPC1-202ENST00000427943 Q6ZTI0 123 aa12.85□□□□□ -0.35
PSPC1-202ENST00000427943 Q8TAT8 98 aa12.85□□□□□ -0.35
PSPC1-202ENST00000427943 ZNF503Q96F45 646 aa12.85□□□□□ -0.35
PSPC1-202ENST00000427943 TMPRSS5Q9H3S3 457 aa12.85□□□□□ -0.35
PSPC1-202ENST00000427943 GSN-AS1Q9NRJ2 163 aa12.85□□□□□ -0.35
PSPC1-202ENST00000427943 DNAH17Q9UFH2 4485 aa12.84□□□□□ -0.35
PSPC1-202ENST00000427943 TRAV26-1A0A087WT03 109 aa12.84□□□□□ -0.35
PSPC1-202ENST00000427943 ZNF324O75467 553 aaPredicted RBP12.84□□□□□ -0.35
PSPC1-202ENST00000427943 EIF3GO75821 320 aaKnown RBP eCLIP12.84□□□□□ -0.35
PSPC1-202ENST00000427943 IFNA5P01569 189 aa12.84□□□□□ -0.35
PSPC1-202ENST00000427943 GPX1P07203 203 aa12.84□□□□□ -0.35
PSPC1-202ENST00000427943 CRISP2P16562 243 aa12.84□□□□□ -0.35
PSPC1-202ENST00000427943 ZFAND2AQ8N6M9 145 aa12.84□□□□□ -0.35
PSPC1-202ENST00000427943 C11orf72Q8NBR9 251 aa12.84□□□□□ -0.35
PSPC1-202ENST00000427943 ZNRF2Q8NHG8 242 aa12.84□□□□□ -0.35
PSPC1-202ENST00000427943 SCGB1C1Q8TD33 95 aa12.84□□□□□ -0.35
PSPC1-202ENST00000427943 GNPNAT1Q96EK6 184 aaPredicted RBP12.84□□□□□ -0.35
PSPC1-202ENST00000427943 LINC00588Q9Y4M8 146 aa12.84□□□□□ -0.35
PSPC1-202ENST00000427943 M6PRP20645 277 aa12.83□□□□□ -0.36
PSPC1-202ENST00000427943 CCL18P55774 89 aa12.83□□□□□ -0.36
PSPC1-202ENST00000427943 DAZ2Q13117 558 aaKnown RBP12.83□□□□□ -0.36
PSPC1-202ENST00000427943 Q6ZQT7 251 aa12.83□□□□□ -0.36
PSPC1-202ENST00000427943 EIF4E3Q8N5X7 224 aaKnown RBP12.83□□□□□ -0.36
PSPC1-202ENST00000427943 ZNF680Q8NEM1 530 aa12.83□□□□□ -0.36
PSPC1-202ENST00000427943 BATF3Q9NR55 127 aa12.83□□□□□ -0.36
PSPC1-202ENST00000427943 ALG5Q9Y673 324 aa12.83□□□□□ -0.36
PSPC1-202ENST00000427943 RANP62826 216 aaKnown RBP12.82□□□□□ -0.36
PSPC1-202ENST00000427943 KHDC3LQ587J8 217 aa12.82□□□□□ -0.36
PSPC1-202ENST00000427943 SOHLH1Q5JUK2 328 aa12.82□□□□□ -0.36
PSPC1-202ENST00000427943 C1orf134Q5TEV5 83 aa12.82□□□□□ -0.36
PSPC1-202ENST00000427943 Q9H3A6 140 aa12.82□□□□□ -0.36
PSPC1-202ENST00000427943 WFDC1Q9HC57 220 aa12.82□□□□□ -0.36
PSPC1-202ENST00000427943 ZNF492Q9P255 531 aa12.82□□□□□ -0.36
PSPC1-202ENST00000427943 TP53TG3Q9ULZ0 132 aa12.82□□□□□ -0.36
PSPC1-202ENST00000427943 PKHD1P08F94 4074 aa12.82□□□□□ -0.36
PSPC1-202ENST00000427943 TRGV1A0A0A0MS02 117 aa12.81□□□□□ -0.36
PSPC1-202ENST00000427943 RGS13O14921 159 aa12.81□□□□□ -0.36
PSPC1-202ENST00000427943 ZNF138P52744 262 aa12.81□□□□□ -0.36
PSPC1-202ENST00000427943 ANXA2RQ3ZCQ2 193 aa12.81□□□□□ -0.36
PSPC1-202ENST00000427943 SSX7Q7RTT5 188 aa12.81□□□□□ -0.36
PSPC1-202ENST00000427943 RXFP4Q8TDU9 374 aa12.81□□□□□ -0.36
PSPC1-202ENST00000427943 LINC00467Q9BRT7 94 aa12.81□□□□□ -0.36
PSPC1-202ENST00000427943 KLF12Q9Y4X4 402 aa12.81□□□□□ -0.36
PSPC1-202ENST00000427943 MUC4Q99102 2169 aa12.81□□□□□ -0.36
PSPC1-202ENST00000427943 TRGV2A0A075B6R0 118 aa12.8□□□□□ -0.36
PSPC1-202ENST00000427943 NBDYA0A0U1RRE5 68 aa12.8□□□□□ -0.36
PSPC1-202ENST00000427943 NMBP08949 121 aa12.8□□□□□ -0.36
PSPC1-202ENST00000427943 CSN1S1P47710 185 aa12.8□□□□□ -0.36
PSPC1-202ENST00000427943 TAS2R45P59539 299 aa12.8□□□□□ -0.36
PSPC1-202ENST00000427943 HERC2O95714 4834 aa12.79□□□□□ -0.36
PSPC1-202ENST00000427943 TCL1AP56279 114 aa12.79□□□□□ -0.36
PSPC1-202ENST00000427943 IGHV1OR15-1A0A075B7D0 117 aa12.78□□□□□ -0.36
PSPC1-202ENST00000427943 RAB2AP61019 212 aa12.78□□□□□ -0.36
PSPC1-202ENST00000427943 IBA57Q5T440 356 aaKnown RBP12.78□□□□□ -0.36
PSPC1-202ENST00000427943 LYPD1Q8N2G4 141 aa12.78□□□□□ -0.36
PSPC1-202ENST00000427943 HYLS1Q96M11 299 aa12.78□□□□□ -0.36
PSPC1-202ENST00000427943 ARPC5LQ9BPX5 153 aa12.78□□□□□ -0.36
PSPC1-202ENST00000427943 MRPL16Q9NX20 251 aaKnown RBP12.78□□□□□ -0.36
PSPC1-202ENST00000427943 RPH3ALQ9UNE2 315 aa12.78□□□□□ -0.36
PSPC1-202ENST00000427943 PKD1P98161 4303 aa12.77□□□□□ -0.36
PSPC1-202ENST00000427943 RBAKDNA6NC62 111 aa12.77□□□□□ -0.37
PSPC1-202ENST00000427943 SPINK4O60575 86 aa12.77□□□□□ -0.37
PSPC1-202ENST00000427943 ACOT6Q3I5F7 207 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms