RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 BSNQ9UPA5 3926 aa12.99□□□□□ -0.33
NPC1L1-203ENST00000423141 CD300EQ496F6 205 aaPredicted RBP12.99□□□□□ -0.33
NPC1L1-203ENST00000423141 BDP1A6H8Y1 2624 aa12.99□□□□□ -0.33
NPC1L1-203ENST00000423141 TRAV40A0A0B4J280 105 aa12.99□□□□□ -0.33
NPC1L1-203ENST00000423141 ORM1P02763 201 aa12.99□□□□□ -0.33
NPC1L1-203ENST00000423141 GFRALQ6UXV0 394 aa12.99□□□□□ -0.33
NPC1L1-203ENST00000423141 DCHS2Q6V1P9 2916 aa12.99□□□□□ -0.33
NPC1L1-203ENST00000423141 CUL9Q8IWT3 2517 aa12.98□□□□□ -0.33
NPC1L1-203ENST00000423141 PDE6HQ13956 83 aa12.98□□□□□ -0.33
NPC1L1-203ENST00000423141 PLA2G2CQ5R387 149 aa12.98□□□□□ -0.33
NPC1L1-203ENST00000423141 FOXI2Q6ZQN5 318 aa12.98□□□□□ -0.33
NPC1L1-203ENST00000423141 THBDP07204 575 aa12.98□□□□□ -0.33
NPC1L1-203ENST00000423141 INSL3P51460 131 aa12.98□□□□□ -0.33
NPC1L1-203ENST00000423141 RPEQ96AT9 228 aa12.98□□□□□ -0.33
NPC1L1-203ENST00000423141 ZNF479Q96JC4 524 aa12.98□□□□□ -0.33
NPC1L1-203ENST00000423141 PSMG3-AS1Q96PY0 264 aa12.98□□□□□ -0.33
NPC1L1-203ENST00000423141 SPAG8Q99932 426 aaPredicted RBP12.98□□□□□ -0.33
NPC1L1-203ENST00000423141 WNK2Q9Y3S1 2297 aa12.98□□□□□ -0.33
NPC1L1-203ENST00000423141 LINC01546A6NGU7 62 aa12.97□□□□□ -0.33
NPC1L1-203ENST00000423141 DPM2O94777 84 aa12.97□□□□□ -0.33
NPC1L1-203ENST00000423141 IGHV3-23P01764 117 aa12.97□□□□□ -0.33
NPC1L1-203ENST00000423141 CCDC144NLQ6NUI1 221 aa12.97□□□□□ -0.33
NPC1L1-203ENST00000423141 MRPL35Q9NZE8 188 aaKnown RBP12.97□□□□□ -0.33
NPC1L1-203ENST00000423141 EP300Q09472 2414 aaPredicted RBP12.97□□□□□ -0.33
NPC1L1-203ENST00000423141 IGHV3OR16-8A0A075B7F1 116 aa12.97□□□□□ -0.33
NPC1L1-203ENST00000423141 SHISA9B4DS77 424 aa12.97□□□□□ -0.33
NPC1L1-203ENST00000423141 ASCL5Q7RTU5 278 aa12.97□□□□□ -0.33
NPC1L1-203ENST00000423141 CLUHP3Q96NS8 147 aa12.97□□□□□ -0.33
NPC1L1-203ENST00000423141 LRBAP50851 2863 aa12.96□□□□□ -0.33
NPC1L1-203ENST00000423141 IGHG4P01861 327 aa12.96□□□□□ -0.33
NPC1L1-203ENST00000423141 COX8CQ7Z4L0 72 aa12.96□□□□□ -0.33
NPC1L1-203ENST00000423141 SPAARA0A1B0GVQ0 90 aa12.96□□□□□ -0.34
NPC1L1-203ENST00000423141 F8W1H4 67 aa12.96□□□□□ -0.34
NPC1L1-203ENST00000423141 KAAG1Q9UBP8 84 aa12.96□□□□□ -0.34
NPC1L1-203ENST00000423141 PRRG2O14669 202 aa12.95□□□□□ -0.34
NPC1L1-203ENST00000423141 SCGB1A1P11684 91 aa12.95□□□□□ -0.34
NPC1L1-203ENST00000423141 C12orf74Q32Q52 190 aa12.95□□□□□ -0.34
NPC1L1-203ENST00000423141 TMEM190Q8WZ59 177 aa12.95□□□□□ -0.34
NPC1L1-203ENST00000423141 PRO3102Q9H379 93 aa12.95□□□□□ -0.34
NPC1L1-203ENST00000423141 NXT2Q9NPJ8 142 aaKnown RBP12.95□□□□□ -0.34
NPC1L1-203ENST00000423141 F8W735 103 aaPredicted RBP12.95□□□□□ -0.34
NPC1L1-203ENST00000423141 LYNX1G3V0Z9 82 aa12.95□□□□□ -0.34
NPC1L1-203ENST00000423141 TIMM23O14925 209 aa12.95□□□□□ -0.34
NPC1L1-203ENST00000423141 LYNX1P0DP58 116 aa12.95□□□□□ -0.34
NPC1L1-203ENST00000423141 ERCC8Q13216 396 aa12.95□□□□□ -0.34
NPC1L1-203ENST00000423141 LCNL1Q6ZST4 164 aa12.95□□□□□ -0.34
NPC1L1-203ENST00000423141 SMPXQ9UHP9 88 aa12.95□□□□□ -0.34
NPC1L1-203ENST00000423141 GVINP1Q7Z2Y8 2422 aa12.95□□□□□ -0.34
NPC1L1-203ENST00000423141 VSTM5A8MXK1 200 aa12.94□□□□□ -0.34
NPC1L1-203ENST00000423141 ATP5G2Q06055 141 aa12.94□□□□□ -0.34
NPC1L1-203ENST00000423141 DTX2Q86UW9 622 aa12.94□□□□□ -0.34
NPC1L1-203ENST00000423141 RNASE6Q93091 150 aaKnown RBP12.94□□□□□ -0.34
NPC1L1-203ENST00000423141 SMAD5-AS1Q9Y6J3 95 aa12.94□□□□□ -0.34
NPC1L1-203ENST00000423141 BMI1P35226 326 aa12.94□□□□□ -0.34
NPC1L1-203ENST00000423141 SPATA25Q9BR10 227 aa12.94□□□□□ -0.34
NPC1L1-203ENST00000423141 ARHGAP32A7KAX9 2087 aa12.93□□□□□ -0.34
NPC1L1-203ENST00000423141 TRAV26-2A0A0B4J265 109 aa12.93□□□□□ -0.34
NPC1L1-203ENST00000423141 TRGV3P03979 118 aa12.93□□□□□ -0.34
NPC1L1-203ENST00000423141 ATP6V0BQ99437 205 aa12.93□□□□□ -0.34
NPC1L1-203ENST00000423141 IGLV2-18A0A075B6J9 118 aa12.93□□□□□ -0.34
NPC1L1-203ENST00000423141 IGHV3-35A0A0C4DH35 117 aa12.93□□□□□ -0.34
NPC1L1-203ENST00000423141 CNFNQ9BYD5 112 aa12.93□□□□□ -0.34
NPC1L1-203ENST00000423141 DYNLRB1Q9NP97 96 aa12.93□□□□□ -0.34
NPC1L1-203ENST00000423141 RALYQ9UKM9 306 aaKnown RBP12.93□□□□□ -0.34
NPC1L1-203ENST00000423141 PRAC2D3DTV9 90 aa12.92□□□□□ -0.34
NPC1L1-203ENST00000423141 Q5PR19 223 aa12.92□□□□□ -0.34
NPC1L1-203ENST00000423141 FANCD2OSQ96PS1 177 aa12.92□□□□□ -0.34
NPC1L1-203ENST00000423141 PRO0461Q9UI25 63 aa12.92□□□□□ -0.34
NPC1L1-203ENST00000423141 APC2O95996 2303 aa12.92□□□□□ -0.34
NPC1L1-203ENST00000423141 ATP5LO75964 103 aa12.92□□□□□ -0.34
NPC1L1-203ENST00000423141 NDUFA3O95167 84 aa12.92□□□□□ -0.34
NPC1L1-203ENST00000423141 DYNAPQ8N1N2 210 aa12.92□□□□□ -0.34
NPC1L1-203ENST00000423141 HIST1H4GQ99525 98 aa12.92□□□□□ -0.34
NPC1L1-203ENST00000423141 EFNA4P52798 201 aa12.91□□□□□ -0.34
NPC1L1-203ENST00000423141 Q8N8P6 123 aa12.91□□□□□ -0.34
NPC1L1-203ENST00000423141 RAB1BQ9H0U4 201 aa12.91□□□□□ -0.34
NPC1L1-203ENST00000423141 PIEZO2Q9H5I5 2752 aa12.91□□□□□ -0.34
NPC1L1-203ENST00000423141 J3QR89 54 aa12.91□□□□□ -0.34
NPC1L1-203ENST00000423141 SRSF1Q07955 248 aaKnown RBP eCLIP12.91□□□□□ -0.34
NPC1L1-203ENST00000423141 GAGE13Q4V321 117 aa12.91□□□□□ -0.34
NPC1L1-203ENST00000423141 PSMG4Q5JS54 123 aa12.91□□□□□ -0.34
NPC1L1-203ENST00000423141 A0A1B0GV72 72 aa12.9□□□□□ -0.34
NPC1L1-203ENST00000423141 RPL7P18124 248 aaKnown RBP12.9□□□□□ -0.34
NPC1L1-203ENST00000423141 CFHR4Q92496 578 aa12.9□□□□□ -0.34
NPC1L1-203ENST00000423141 RELNP78509 3460 aa12.9□□□□□ -0.34
NPC1L1-203ENST00000423141 A0A0G2JNJ9 132 aa12.9□□□□□ -0.34
NPC1L1-203ENST00000423141 FABP5P3A8MUU1 101 aa12.9□□□□□ -0.34
NPC1L1-203ENST00000423141 LY6LH3BQJ8 138 aa12.9□□□□□ -0.34
NPC1L1-203ENST00000423141 MFAP4P55083 255 aa12.9□□□□□ -0.34
NPC1L1-203ENST00000423141 RRN3P1Q2M238 152 aa12.9□□□□□ -0.34
NPC1L1-203ENST00000423141 TTC9CQ8N5M4 171 aa12.9□□□□□ -0.34
NPC1L1-203ENST00000423141 SRSF8Q9BRL6 282 aaKnown RBP12.9□□□□□ -0.34
NPC1L1-203ENST00000423141 Q9UFV3 132 aa12.9□□□□□ -0.34
NPC1L1-203ENST00000423141 CACNA1BQ00975 2339 aa12.9□□□□□ -0.35
NPC1L1-203ENST00000423141 IGLV11-55A0A075B6I3 123 aa12.89□□□□□ -0.35
NPC1L1-203ENST00000423141 NBR2O15453 112 aa12.89□□□□□ -0.35
NPC1L1-203ENST00000423141 RAB9AP51151 201 aa12.89□□□□□ -0.35
NPC1L1-203ENST00000423141 IL17RELQ6ZVW7 336 aa12.89□□□□□ -0.35
NPC1L1-203ENST00000423141 RNF182Q8N6D2 247 aa12.89□□□□□ -0.35
NPC1L1-203ENST00000423141 WFDC12Q8WWY7 111 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms