RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 ZFP2Q6ZN57 461 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 SLC25A39Q9BZJ4 359 aaPredicted RBP4.76□□□□□ -1.65
CHD2-202ENST00000420239 DEFB127Q9H1M4 99 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 TMEM160Q9NX00 188 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 MRPL35Q9NZE8 188 aaKnown RBP4.76□□□□□ -1.65
CHD2-202ENST00000420239 RNF7Q9UBF6 113 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 HIGD1AQ9Y241 93 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 COL6A3P12111 3177 aa4.75□□□□□ -1.65
CHD2-202ENST00000420239 SPTBN5Q9NRC6 3674 aaKnown RBP4.75□□□□□ -1.65
CHD2-202ENST00000420239 WDFY3Q8IZQ1 3526 aa4.75□□□□□ -1.65
CHD2-202ENST00000420239 IGLV3-9A0A075B6K5 115 aa4.75□□□□□ -1.65
CHD2-202ENST00000420239 K7EM74 188 aa4.75□□□□□ -1.65
CHD2-202ENST00000420239 ATP5LO75964 103 aa4.75□□□□□ -1.65
CHD2-202ENST00000420239 CNIH1O95406 144 aa4.75□□□□□ -1.65
CHD2-202ENST00000420239 IGHG3P01860 377 aa4.75□□□□□ -1.65
CHD2-202ENST00000420239 PSMB2P49721 201 aa4.75□□□□□ -1.65
CHD2-202ENST00000420239 TWIST1Q15672 202 aa4.75□□□□□ -1.65
CHD2-202ENST00000420239 ANXA2RQ3ZCQ2 193 aa4.75□□□□□ -1.65
CHD2-202ENST00000420239 TEX36Q5VZQ5 186 aa4.75□□□□□ -1.65
CHD2-202ENST00000420239 SIGLEC15Q6ZMC9 328 aa4.75□□□□□ -1.65
CHD2-202ENST00000420239 TEN1Q86WV5 123 aa4.75□□□□□ -1.65
CHD2-202ENST00000420239 MAP1LC3AQ9H492 121 aa4.75□□□□□ -1.65
CHD2-202ENST00000420239 SDK1Q7Z5N4 2213 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 TRBV19A0A075B6N1 114 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 MRPS12O15235 138 aaKnown RBP4.74□□□□□ -1.65
CHD2-202ENST00000420239 CRYGBP07316 175 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 ZNF688P0C7X2 276 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 GATA1P15976 413 aaPredicted RBP4.74□□□□□ -1.65
CHD2-202ENST00000420239 SRD5A1P18405 259 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 TNFRSF1AP19438 455 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 GLRXP35754 106 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 LYZP61626 148 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 HCP5Q6MZN7 132 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 SFTA2Q6UW10 78 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 SBSPONQ8IVN8 264 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 TEX29Q8N6K0 151 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 TNFRSF18Q9Y5U5 241 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 SLC25A15Q9Y619 301 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 KNTC1P50748 2209 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 LINC01549A6NIU2 74 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 M0R3E3 92 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 RHODO00212 210 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 HOXA3O43365 443 aaPredicted RBP4.74□□□□□ -1.65
CHD2-202ENST00000420239 IL4P05112 153 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 LGALS1P09382 135 aaKnown RBP4.74□□□□□ -1.65
CHD2-202ENST00000420239 NDUFV3P56181 108 aaKnown RBP4.74□□□□□ -1.65
CHD2-202ENST00000420239 UBE2D3P61077 147 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 UBE2D2P62837 147 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 TCF15Q12870 199 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 VMA21Q3ZAQ7 101 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 ZNF575Q86XF7 245 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 KRTAP1-3Q8IUG1 177 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 ANKRD29Q8N6D5 301 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 SCNM1Q9BWG6 230 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 MSRB1Q9NZV6 116 aa4.74□□□□□ -1.65
CHD2-202ENST00000420239 HEATR1Q9H583 2144 aaKnown RBP4.73□□□□□ -1.65
CHD2-202ENST00000420239 IGLV2-18A0A075B6J9 118 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 H3BRN7 92 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 CEACAM4O75871 244 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 IGLC6P0CF74 106 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 SHANK2-AS3Q9BTD1 123 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 CNFNQ9BYD5 112 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 NGBQ9NPG2 151 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 MED13Q9UHV7 2174 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 A0A087WX48 190 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 MYMXA0A1B0GTQ4 84 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 FABP5P3A8MUU1 101 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 CRLF1O75462 422 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 NDUFA3O95167 84 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 TCL1BO95988 128 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 APELAP0DMC3 54 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 PRTN3P24158 256 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 UBE2D1P51668 147 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 PIP4P1Q86T03 277 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 RPEQ96AT9 228 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 CCL13Q99616 98 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 CTSZQ9UBR2 303 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 CACNA1GO43497 2377 aa4.73□□□□□ -1.65
CHD2-202ENST00000420239 TRBV20-1A0A075B6N2 111 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 TRAV4A0A0B4J268 109 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 LOC107984156A0A0G2JMH3 177 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 GAGE12JA6NER3 117 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 GAGE7O76087 117 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 TGFAP01135 160 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 GAGE12FP0CL80 117 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 GAGE12GP0CL81 117 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 GAGE12IP0CL82 117 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 EGR2P11161 476 aaPredicted RBP4.72□□□□□ -1.65
CHD2-202ENST00000420239 WT1P19544 449 aaPredicted RBP4.72□□□□□ -1.65
CHD2-202ENST00000420239 RPL27AP46776 148 aaKnown RBP4.72□□□□□ -1.65
CHD2-202ENST00000420239 ZNF80P51504 273 aaPredicted RBP4.72□□□□□ -1.65
CHD2-202ENST00000420239 GAGE4Q13068 117 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 PDE6HQ13956 83 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 ARL17AQ8IVW1 177 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 FAM216BQ8N7L0 139 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 C9orf106Q8NAJ2 232 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 PLEKHB2Q96CS7 222 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 FBXL15Q9H469 300 aa4.72□□□□□ -1.65
CHD2-202ENST00000420239 NXT2Q9NPJ8 142 aaKnown RBP4.72□□□□□ -1.65
CHD2-202ENST00000420239 HIF1ANQ9NWT6 349 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms