RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 IGKV2D-40P01614 121 aaPredicted RBP15.92■□□□□ 0.14
GPC1-202ENST00000420138 CSN1S1P47710 185 aa15.92■□□□□ 0.14
GPC1-202ENST00000420138 LCN12Q6JVE5 192 aa15.92■□□□□ 0.14
GPC1-202ENST00000420138 SERTM2A0A1B0GWG4 89 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 TMEM213A2RRL7 107 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 TCF21O43680 179 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 MT-ND6P03923 174 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 ASCL2Q99929 193 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 C16orf95Q9H693 158 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 FN1P02751 2386 aaKnown RBP15.91■□□□□ 0.14
GPC1-202ENST00000420138 PRAC2D3DTV9 90 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 K7EQM0 130 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 SOCS3O14543 225 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 SPINK4O60575 86 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 CA1P00915 261 aaPredicted RBP15.91■□□□□ 0.14
GPC1-202ENST00000420138 AMBPP02760 352 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 FRMD6-AS1P0C7T7 363 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 REC114Q7Z4M0 266 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 ZNF492Q9P255 531 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 UFC1Q9Y3C8 167 aa15.91■□□□□ 0.14
GPC1-202ENST00000420138 C19orf71A6NCJ1 209 aa15.9■□□□□ 0.14
GPC1-202ENST00000420138 A8MWP6 167 aa15.9■□□□□ 0.14
GPC1-202ENST00000420138 HOXD3P31249 432 aaPredicted RBP15.9■□□□□ 0.14
GPC1-202ENST00000420138 HIST2H2BDQ6DRA6 164 aa15.9■□□□□ 0.14
GPC1-202ENST00000420138 LINC01006Q8NI28 216 aa15.9■□□□□ 0.14
GPC1-202ENST00000420138 ZFP30Q9Y2G7 519 aa15.9■□□□□ 0.14
GPC1-202ENST00000420138 NF1P21359 2839 aa15.89■□□□□ 0.14
GPC1-202ENST00000420138 LGALS9O00182 355 aa15.89■□□□□ 0.13
GPC1-202ENST00000420138 SYNJ2BPP57105 145 aa15.89■□□□□ 0.13
GPC1-202ENST00000420138 DEFB136Q30KP8 78 aa15.89■□□□□ 0.13
GPC1-202ENST00000420138 TMEM136Q6ZRR5 245 aa15.89■□□□□ 0.13
GPC1-202ENST00000420138 TSKUQ8WUA8 353 aa15.89■□□□□ 0.13
GPC1-202ENST00000420138 C4orf3Q8WVX3 66 aa15.89■□□□□ 0.13
GPC1-202ENST00000420138 VGLL1Q99990 258 aa15.89■□□□□ 0.13
GPC1-202ENST00000420138 MRPL54Q6P161 138 aaKnown RBP15.88■□□□□ 0.13
GPC1-202ENST00000420138 TMEM18Q96B42 140 aa15.88■□□□□ 0.13
GPC1-202ENST00000420138 MRPL53Q96EL3 112 aaKnown RBP15.88■□□□□ 0.13
GPC1-202ENST00000420138 NAT8BQ9UHF3 227 aa15.88■□□□□ 0.13
GPC1-202ENST00000420138 KLF5Q13887 457 aaPredicted RBP15.87■□□□□ 0.13
GPC1-202ENST00000420138 RASL11AQ6T310 242 aa15.87■□□□□ 0.13
GPC1-202ENST00000420138 ZC2HC1AQ96GY0 325 aa15.87■□□□□ 0.13
GPC1-202ENST00000420138 SELENOKQ9Y6D0 94 aa15.87■□□□□ 0.13
GPC1-202ENST00000420138 HLA-DQA1P01909 254 aa15.87■□□□□ 0.13
GPC1-202ENST00000420138 CRISP2P16562 243 aa15.87■□□□□ 0.13
GPC1-202ENST00000420138 CT83Q5H943 113 aa15.87■□□□□ 0.13
GPC1-202ENST00000420138 GBGT1Q8N5D6 347 aa15.87■□□□□ 0.13
GPC1-202ENST00000420138 NUP35Q8NFH5 326 aa15.87■□□□□ 0.13
GPC1-202ENST00000420138 DAZAP1Q96EP5 407 aaKnown RBP15.87■□□□□ 0.13
GPC1-202ENST00000420138 C20orf173Q96LM9 149 aa15.87■□□□□ 0.13
GPC1-202ENST00000420138 RPP21Q9H633 154 aaKnown RBP15.87■□□□□ 0.13
GPC1-202ENST00000420138 CRIP1P50238 77 aa15.86■□□□□ 0.13
GPC1-202ENST00000420138 DNLZQ5SXM8 178 aa15.86■□□□□ 0.13
GPC1-202ENST00000420138 COX8CQ7Z4L0 72 aa15.86■□□□□ 0.13
GPC1-202ENST00000420138 C16orf92Q96LL3 132 aa15.86■□□□□ 0.13
GPC1-202ENST00000420138 NRN1Q9NPD7 142 aa15.86■□□□□ 0.13
GPC1-202ENST00000420138 GSN-AS1Q9NRJ2 163 aa15.86■□□□□ 0.13
GPC1-202ENST00000420138 GRIFINA4D1Z8 144 aa15.85■□□□□ 0.13
GPC1-202ENST00000420138 P01737 135 aa15.85■□□□□ 0.13
GPC1-202ENST00000420138 SLURP1P55000 103 aa15.85■□□□□ 0.13
GPC1-202ENST00000420138 RAB4BP61018 213 aa15.85■□□□□ 0.13
GPC1-202ENST00000420138 C8orf49Q96NF6 230 aa15.85■□□□□ 0.13
GPC1-202ENST00000420138 NEU1Q99519 415 aa15.85■□□□□ 0.13
GPC1-202ENST00000420138 RBAKDNA6NC62 111 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 A8MWL6 223 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 NPIPB6E9PJ23 425 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 TMEM256Q8N2U0 113 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 OR11H1Q8NG94 326 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 Q8TAT8 98 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 PRR25Q96S07 402 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 FBLL1A6NHQ2 334 aaKnown RBP15.84■□□□□ 0.13
GPC1-202ENST00000420138 LINC01619G3V211 115 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 NDUFA7O95182 113 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 CD28P10747 220 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 ERCC8Q13216 396 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 ADAMTSL5Q6ZMM2 481 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 TCF24Q7RTU0 167 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 WFDC12Q8WWY7 111 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 CLEC5AQ9NY25 188 aa15.84■□□□□ 0.13
GPC1-202ENST00000420138 A0A1B0GUS0 222 aa15.83■□□□□ 0.12
GPC1-202ENST00000420138 HIGD1CA8MV81 97 aa15.83■□□□□ 0.12
GPC1-202ENST00000420138 SRSF2Q01130 221 aaKnown RBP15.83■□□□□ 0.12
GPC1-202ENST00000420138 Q0VG73 95 aa15.83■□□□□ 0.12
GPC1-202ENST00000420138 KLHL30-AS1Q8NEE0 82 aa15.83■□□□□ 0.12
GPC1-202ENST00000420138 DUX3Q96PT4 197 aa15.83■□□□□ 0.12
GPC1-202ENST00000420138 C2orf70A6NJV1 201 aa15.82■□□□□ 0.12
GPC1-202ENST00000420138 RPL11P62913 178 aaKnown RBP15.82■□□□□ 0.12
GPC1-202ENST00000420138 JOSD1Q15040 202 aaPredicted RBP15.82■□□□□ 0.12
GPC1-202ENST00000420138 KHDC1LQ5JSQ8 128 aa15.82■□□□□ 0.12
GPC1-202ENST00000420138 OR1N2Q8NGR9 330 aa15.82■□□□□ 0.12
GPC1-202ENST00000420138 IGKV3-7A0A075B6H7 116 aa15.82■□□□□ 0.12
GPC1-202ENST00000420138 ATP5L2Q7Z4Y8 100 aa15.82■□□□□ 0.12
GPC1-202ENST00000420138 C11orf44Q8N8P7 122 aa15.82■□□□□ 0.12
GPC1-202ENST00000420138 OR4B1Q8NGF8 309 aa15.82■□□□□ 0.12
GPC1-202ENST00000420138 DCANP1Q8TF63 244 aa15.82■□□□□ 0.12
GPC1-202ENST00000420138 GFRA4Q9GZZ7 299 aa15.82■□□□□ 0.12
GPC1-202ENST00000420138 AGPAT4-IT1Q9H0P7 198 aa15.82■□□□□ 0.12
GPC1-202ENST00000420138 TP53TG3Q9ULZ0 132 aa15.82■□□□□ 0.12
GPC1-202ENST00000420138 NUPR1O60356 82 aa15.81■□□□□ 0.12
GPC1-202ENST00000420138 APCSP02743 223 aa15.81■□□□□ 0.12
GPC1-202ENST00000420138 SAPCD1Q5SSQ6 148 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms