RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 SPAG11BQ08648 103 aa-0.92□□□□□ -2.56
RNU4-55P-201ENST00000410731 C5orf17Q8NAS9 161 aa-0.92□□□□□ -2.56
RNU4-55P-201ENST00000410731 DDI1Q8WTU0 396 aa-0.92□□□□□ -2.56
RNU4-55P-201ENST00000410731 ARL5BQ96KC2 179 aa-0.92□□□□□ -2.56
RNU4-55P-201ENST00000410731 CFAP53Q96M91 514 aa-0.92□□□□□ -2.56
RNU4-55P-201ENST00000410731 CACYBPQ9HB71 228 aaKnown RBP-0.92□□□□□ -2.56
RNU4-55P-201ENST00000410731 ATG2AQ2TAZ0 1938 aa-0.93□□□□□ -2.56
RNU4-55P-201ENST00000410731 RPS3P23396 243 aaKnown RBP eCLIP-0.93□□□□□ -2.56
RNU4-55P-201ENST00000410731 AESQ08117 197 aa-0.93□□□□□ -2.56
RNU4-55P-201ENST00000410731 KLRD1Q13241 179 aa-0.93□□□□□ -2.56
RNU4-55P-201ENST00000410731 ZNF714Q96N38 554 aa-0.93□□□□□ -2.56
RNU4-55P-201ENST00000410731 CEP164Q9UPV0 1460 aa-0.93□□□□□ -2.56
RNU4-55P-201ENST00000410731 NHSL1Q5SYE7 1610 aa-0.93□□□□□ -2.56
RNU4-55P-201ENST00000410731 MAP2P11137 1827 aaKnown RBP-0.94□□□□□ -2.56
RNU4-55P-201ENST00000410731 RPP14O95059 124 aaKnown RBP-0.94□□□□□ -2.56
RNU4-55P-201ENST00000410731 CRHP06850 196 aa-0.94□□□□□ -2.56
RNU4-55P-201ENST00000410731 WFDC2Q14508 124 aa-0.94□□□□□ -2.56
RNU4-55P-201ENST00000410731 FXYD3Q14802 87 aa-0.94□□□□□ -2.56
RNU4-55P-201ENST00000410731 Q96NJ1 140 aa-0.94□□□□□ -2.56
RNU4-55P-201ENST00000410731 MUC17Q685J3 4493 aa-0.94□□□□□ -2.56
RNU4-55P-201ENST00000410731 ITPR3Q14573 2671 aa-0.94□□□□□ -2.56
RNU4-55P-201ENST00000410731 CTTNBP2Q8WZ74 1663 aa-0.94□□□□□ -2.56
RNU4-55P-201ENST00000410731 VPS13DQ5THJ4 4388 aa-0.94□□□□□ -2.56
RNU4-55P-201ENST00000410731 CCDC144AA2RUR9 1427 aa-0.95□□□□□ -2.56
RNU4-55P-201ENST00000410731 DUXBA0A1W2PPF3 345 aa-0.95□□□□□ -2.56
RNU4-55P-201ENST00000410731 PIAS1O75925 651 aa-0.95□□□□□ -2.56
RNU4-55P-201ENST00000410731 NMBP08949 121 aa-0.95□□□□□ -2.56
RNU4-55P-201ENST00000410731 RBM3P98179 157 aaKnown RBP-0.95□□□□□ -2.56
RNU4-55P-201ENST00000410731 C5orf56Q8N8D9 126 aa-0.95□□□□□ -2.56
RNU4-55P-201ENST00000410731 CST11Q9H112 138 aa-0.95□□□□□ -2.56
RNU4-55P-201ENST00000410731 AFDNP55196 1824 aaKnown RBP-0.95□□□□□ -2.56
RNU4-55P-201ENST00000410731 NINQ8N4C6 2090 aa-0.95□□□□□ -2.56
RNU4-55P-201ENST00000410731 NBDYA0A0U1RRE5 68 aa-0.96□□□□□ -2.56
RNU4-55P-201ENST00000410731 H7BYZ3 331 aa-0.96□□□□□ -2.56
RNU4-55P-201ENST00000410731 LYRM1O43325 122 aa-0.96□□□□□ -2.56
RNU4-55P-201ENST00000410731 LYPLA2O95372 231 aa-0.96□□□□□ -2.56
RNU4-55P-201ENST00000410731 TCRBP04435 133 aa-0.96□□□□□ -2.56
RNU4-55P-201ENST00000410731 MPC1LP0DKB6 136 aa-0.96□□□□□ -2.56
RNU4-55P-201ENST00000410731 NFYBP25208 207 aa-0.96□□□□□ -2.56
RNU4-55P-201ENST00000410731 Q5VSD8 79 aa-0.96□□□□□ -2.56
RNU4-55P-201ENST00000410731 GRPEL2Q8TAA5 225 aa-0.96□□□□□ -2.56
RNU4-55P-201ENST00000410731 CYP4F30PQ9H0H9 118 aa-0.96□□□□□ -2.56
RNU4-55P-201ENST00000410731 TMEM14BQ9NUH8 114 aa-0.96□□□□□ -2.56
RNU4-55P-201ENST00000410731 NAT8BQ9UHF3 227 aa-0.96□□□□□ -2.56
RNU4-55P-201ENST00000410731 BIVM-ERCC5R4GMW8 1640 aa-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 TRPM7Q96QT4 1865 aa-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 HECTD1Q9ULT8 2610 aa-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 PPRC1Q5VV67 1664 aaKnown RBP-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 LOC101927531A0A1B0GV80 90 aa-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 MCRIP1C9JLW8 97 aa-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 M0R3E3 92 aa-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 IFNA4P05014 189 aa-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 RPS17P08708 135 aaKnown RBP-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 IDO1P14902 403 aa-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 LSM6P62312 80 aaKnown RBP-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 KLKP1Q107X0 134 aa-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 DIAPH2-AS1Q14236 149 aa-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 Q5XG85 94 aa-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 DEFB132Q7Z7B7 95 aa-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 SIGMAR1Q99720 223 aa-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 DOCK11Q5JSL3 2073 aa-0.97□□□□□ -2.56
RNU4-55P-201ENST00000410731 DNAH3Q8TD57 4116 aa-0.97□□□□□ -2.57
RNU4-55P-201ENST00000410731 USF3Q68DE3 2245 aa-0.97□□□□□ -2.57
RNU4-55P-201ENST00000410731 PKHD1L1Q86WI1 4243 aa-0.97□□□□□ -2.57
RNU4-55P-201ENST00000410731 TNS1Q9HBL0 1735 aaKnown RBP-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 F2Z2F3 143 aa-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 RER1O15258 196 aa-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 TMBIM6P55061 237 aa-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 ARPP19P56211 112 aa-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 SNCBQ16143 134 aa-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 GOLT1AQ6ZVE7 132 aa-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 LINC00269Q8N2A0 174 aa-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 ISOC1Q96CN7 298 aa-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 DSCR8Q96T75 97 aa-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 NMNAT1Q9HAN9 279 aaPredicted RBP-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 MRPL35Q9NZE8 188 aaKnown RBP-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 ASB4Q9Y574 426 aa-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 MYH9P35579 1960 aaKnown RBP-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 DSPPQ9NZW4 1301 aa-0.98□□□□□ -2.57
RNU4-55P-201ENST00000410731 BIRC6Q9NR09 4857 aa-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 CDK13Q14004 1512 aaKnown RBP-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 PCNX1Q96RV3 2341 aa-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 FASNP49327 2511 aaKnown RBP-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 GYPBP06028 91 aa-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 CXCL1P09341 107 aa-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 PI4KAP42356 2102 aa-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 CEBPGP53567 150 aa-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 SNRPD3P62318 126 aaKnown RBP-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 MYO7BQ6PIF6 2116 aa-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 Q8IZM0 81 aa-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 BTF3L4Q96K17 158 aa-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 MAP1LC3BQ9GZQ8 125 aa-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 KIAA0100Q14667 2235 aaKnown RBP-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 HELZP42694 1942 aaKnown RBP-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 KIAA1109Q2LD37 5005 aa-0.99□□□□□ -2.57
RNU4-55P-201ENST00000410731 TRPM1Q7Z4N2 1603 aa-1□□□□□ -2.57
RNU4-55P-201ENST00000410731 SIPA1L2Q9P2F8 1722 aaPredicted RBP-1□□□□□ -2.57
RNU4-55P-201ENST00000410731 A0A0G2JMM0 328 aa-1□□□□□ -2.57
RNU4-55P-201ENST00000410731 A0A1W2PPB8 328 aa-1□□□□□ -2.57
RNU4-55P-201ENST00000410731 KIR3DP1A8MWS1 328 aa-1□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms