RNA–Protein interactions for RNA: ENST00000409551.7

PAX3-207, Transcript of paired box 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-207ENST00000409551 UBE2CO00762 179 aa12.67□□□□□ -0.38
PAX3-207ENST00000409551 CA1P00915 261 aaPredicted RBP12.67□□□□□ -0.38
PAX3-207ENST00000409551 BMI1P35226 326 aa12.67□□□□□ -0.38
PAX3-207ENST00000409551 TCL1AP56279 114 aa12.67□□□□□ -0.38
PAX3-207ENST00000409551 C16orf92Q96LL3 132 aa12.67□□□□□ -0.38
PAX3-207ENST00000409551 TRAPPC1Q9Y5R8 145 aa12.67□□□□□ -0.38
PAX3-207ENST00000409551 FAM231BA6NCW3 169 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 A8MWP6 167 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 LGALS9O00182 355 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 HILS1P60008 231 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 RNF182Q8N6D2 247 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 TMEM158Q8WZ71 300 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 PRR25Q96S07 402 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 GFRA4Q9GZZ7 299 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 SOCS3O14543 225 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 CT45A10P0DMU9 189 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 CDX1P47902 265 aaPredicted RBP12.66□□□□□ -0.38
PAX3-207ENST00000409551 FABP9Q0Z7S8 132 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 KRTAP24-1Q3LI83 254 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 WDR73Q6P4I2 378 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 RASL11AQ6T310 242 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 VGLL1Q99990 258 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 GNB1LQ9BYB4 327 aa12.66□□□□□ -0.38
PAX3-207ENST00000409551 IGHV4OR15-8A0A075B7B6 117 aa12.65□□□□□ -0.38
PAX3-207ENST00000409551 A0A087WW49 117 aa12.65□□□□□ -0.38
PAX3-207ENST00000409551 PRAC2D3DTV9 90 aa12.65□□□□□ -0.38
PAX3-207ENST00000409551 MT-ND6P03923 174 aa12.65□□□□□ -0.38
PAX3-207ENST00000409551 RNASE1P07998 156 aaKnown RBP12.65□□□□□ -0.38
PAX3-207ENST00000409551 NDUFA6P56556 154 aa12.65□□□□□ -0.38
PAX3-207ENST00000409551 C8orf49Q96NF6 230 aa12.65□□□□□ -0.38
PAX3-207ENST00000409551 JMJD8Q96S16 334 aa12.65□□□□□ -0.38
PAX3-207ENST00000409551 NEU1Q99519 415 aa12.65□□□□□ -0.38
PAX3-207ENST00000409551 NDFIP1Q9BT67 221 aa12.65□□□□□ -0.38
PAX3-207ENST00000409551 NRN1Q9NPD7 142 aa12.65□□□□□ -0.38
PAX3-207ENST00000409551 STAB1Q9NY15 2570 aa12.64□□□□□ -0.39
PAX3-207ENST00000409551 PRB4P10163 310 aaPredicted RBP12.64□□□□□ -0.39
PAX3-207ENST00000409551 SAMD13Q5VXD3 122 aa12.64□□□□□ -0.39
PAX3-207ENST00000409551 NUP35Q8NFH5 326 aa12.64□□□□□ -0.39
PAX3-207ENST00000409551 TMEM213A2RRL7 107 aa12.64□□□□□ -0.39
PAX3-207ENST00000409551 HOXA5P20719 270 aa12.64□□□□□ -0.39
PAX3-207ENST00000409551 CRIP1P50238 77 aa12.64□□□□□ -0.39
PAX3-207ENST00000409551 OR2D3Q8NGH3 330 aa12.64□□□□□ -0.39
PAX3-207ENST00000409551 WIPF2Q8TF74 440 aaPredicted RBP12.64□□□□□ -0.39
PAX3-207ENST00000409551 WFDC12Q8WWY7 111 aa12.64□□□□□ -0.39
PAX3-207ENST00000409551 PPP1R14DQ9NXH3 145 aa12.64□□□□□ -0.39
PAX3-207ENST00000409551 HIGD1CA8MV81 97 aa12.63□□□□□ -0.39
PAX3-207ENST00000409551 CBLN1P23435 193 aa12.63□□□□□ -0.39
PAX3-207ENST00000409551 ATP5L2Q7Z4Y8 100 aa12.63□□□□□ -0.39
PAX3-207ENST00000409551 C4orf3Q8WVX3 66 aa12.63□□□□□ -0.39
PAX3-207ENST00000409551 ASCL2Q99929 193 aa12.63□□□□□ -0.39
PAX3-207ENST00000409551 SNURFLB1AK76 121 aa12.62□□□□□ -0.39
PAX3-207ENST00000409551 HOXD3P31249 432 aaPredicted RBP12.62□□□□□ -0.39
PAX3-207ENST00000409551 TMEM136Q6ZRR5 245 aa12.62□□□□□ -0.39
PAX3-207ENST00000409551 C9orf47Q6ZRZ4 202 aa12.62□□□□□ -0.39
PAX3-207ENST00000409551 Q8TAT8 98 aa12.62□□□□□ -0.39
PAX3-207ENST00000409551 MRPL18Q9H0U6 180 aaKnown RBP12.62□□□□□ -0.39
PAX3-207ENST00000409551 C16orf95Q9H693 158 aa12.62□□□□□ -0.39
PAX3-207ENST00000409551 OVOL1O14753 267 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 SPINK4O60575 86 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 FOXA3P55318 350 aaPredicted RBP12.61□□□□□ -0.39
PAX3-207ENST00000409551 ERCC8Q13216 396 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 SMUG1Q53HV7 270 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 TCTEX1D4Q5JR98 221 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 FAM162BQ5T6X4 162 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 TMEM78Q5T7P6 136 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 MRPL54Q6P161 138 aaKnown RBP12.61□□□□□ -0.39
PAX3-207ENST00000409551 TCF24Q7RTU0 167 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 GTSF1Q8WW33 167 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 HLA-DQA1P01909 254 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 FRMD6-AS1P0C7T7 363 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 ZNF138P52744 262 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 SYNJ2BPP57105 145 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 KLF5Q13887 457 aaPredicted RBP12.61□□□□□ -0.39
PAX3-207ENST00000409551 COA6Q5JTJ3 125 aaKnown RBP12.61□□□□□ -0.39
PAX3-207ENST00000409551 RBPMS2Q6ZRY4 209 aaKnown RBP12.61□□□□□ -0.39
PAX3-207ENST00000409551 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.61□□□□□ -0.39
PAX3-207ENST00000409551 ZNF738Q8NE65 137 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 C20orf173Q96LM9 149 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 AGPAT4-IT1Q9H0P7 198 aa12.61□□□□□ -0.39
PAX3-207ENST00000409551 SH2D1AO60880 128 aa12.6□□□□□ -0.39
PAX3-207ENST00000409551 EDN2P20800 178 aa12.6□□□□□ -0.39
PAX3-207ENST00000409551 RPL11P62913 178 aaKnown RBP12.6□□□□□ -0.39
PAX3-207ENST00000409551 GPR61Q9BZJ8 451 aa12.6□□□□□ -0.39
PAX3-207ENST00000409551 A0A1B0GXF2 115 aa12.59□□□□□ -0.39
PAX3-207ENST00000409551 LINC01619G3V211 115 aa12.59□□□□□ -0.39
PAX3-207ENST00000409551 LENEPQ9Y5L5 61 aa12.59□□□□□ -0.39
PAX3-207ENST00000409551 Q6AWC8 147 aa12.58□□□□□ -0.39
PAX3-207ENST00000409551 XKRY2A2RUG3 117 aa12.58□□□□□ -0.4
PAX3-207ENST00000409551 TMEM189A5PLL7 270 aa12.58□□□□□ -0.4
PAX3-207ENST00000409551 C2orf70A6NJV1 201 aa12.58□□□□□ -0.4
PAX3-207ENST00000409551 ID1P41134 155 aa12.58□□□□□ -0.4
PAX3-207ENST00000409551 AKR1D1P51857 326 aa12.58□□□□□ -0.4
PAX3-207ENST00000409551 RPS20P60866 119 aaKnown RBP12.58□□□□□ -0.4
PAX3-207ENST00000409551 C18orf65Q6ZTR6 163 aa12.58□□□□□ -0.4
PAX3-207ENST00000409551 LINC00477Q96M19 166 aa12.58□□□□□ -0.4
PAX3-207ENST00000409551 FABP5P3A8MUU1 101 aa12.57□□□□□ -0.4
PAX3-207ENST00000409551 M0QZ24 198 aa12.57□□□□□ -0.4
PAX3-207ENST00000409551 ZNF80P51504 273 aaPredicted RBP12.57□□□□□ -0.4
PAX3-207ENST00000409551 OR1N2Q8NGR9 330 aa12.57□□□□□ -0.4
PAX3-207ENST00000409551 OR10J6PQ8NGY7 276 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms