RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 LY6EQ16553 131 aa12.11□□□□□ -0.47
CDC42-203ENST00000400259 MRPL53Q96EL3 112 aaKnown RBP12.11□□□□□ -0.47
CDC42-203ENST00000400259 USMG5Q96IX5 58 aa12.11□□□□□ -0.47
CDC42-203ENST00000400259 VGLL1Q99990 258 aa12.11□□□□□ -0.47
CDC42-203ENST00000400259 LINC00527Q9UJ94 153 aa12.11□□□□□ -0.47
CDC42-203ENST00000400259 SPG11Q96JI7 2443 aa12.11□□□□□ -0.47
CDC42-203ENST00000400259 COX6B1P14854 86 aa12.11□□□□□ -0.47
CDC42-203ENST00000400259 ZNF843Q8N446 348 aa12.11□□□□□ -0.47
CDC42-203ENST00000400259 PAM16Q9Y3D7 125 aa12.11□□□□□ -0.47
CDC42-203ENST00000400259 ARMS2P0C7Q2 107 aa12.1□□□□□ -0.47
CDC42-203ENST00000400259 SRSF2Q01130 221 aaKnown RBP12.1□□□□□ -0.47
CDC42-203ENST00000400259 SRSF1Q07955 248 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDC42-203ENST00000400259 IGFL4Q6B9Z1 124 aa12.1□□□□□ -0.47
CDC42-203ENST00000400259 LINC01356Q8N9X3 169 aa12.1□□□□□ -0.47
CDC42-203ENST00000400259 ZNF580Q9UK33 172 aa12.1□□□□□ -0.47
CDC42-203ENST00000400259 TMEM189A5PLL7 270 aa12.09□□□□□ -0.47
CDC42-203ENST00000400259 MYO18BQ8IUG5 2567 aa12.09□□□□□ -0.47
CDC42-203ENST00000400259 NTF3P20783 257 aa12.09□□□□□ -0.47
CDC42-203ENST00000400259 BMI1P35226 326 aa12.09□□□□□ -0.47
CDC42-203ENST00000400259 ARL3P36405 182 aa12.09□□□□□ -0.47
CDC42-203ENST00000400259 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.08□□□□□ -0.48
CDC42-203ENST00000400259 J3QLI3 93 aa12.08□□□□□ -0.48
CDC42-203ENST00000400259 HSBP1O75506 76 aa12.08□□□□□ -0.48
CDC42-203ENST00000400259 RPS20P60866 119 aaKnown RBP12.08□□□□□ -0.48
CDC42-203ENST00000400259 Q8TAT8 98 aa12.08□□□□□ -0.48
CDC42-203ENST00000400259 URB1-AS1Q96HZ7 61 aa12.08□□□□□ -0.48
CDC42-203ENST00000400259 CELSR2Q9HCU4 2923 aa12.08□□□□□ -0.48
CDC42-203ENST00000400259 TRAV8-2A0A0B4J237 113 aa12.08□□□□□ -0.48
CDC42-203ENST00000400259 IGHV3-66A0A0C4DH42 116 aa12.08□□□□□ -0.48
CDC42-203ENST00000400259 NDUFA4O00483 81 aa12.08□□□□□ -0.48
CDC42-203ENST00000400259 PPBPP02775 128 aa12.08□□□□□ -0.48
CDC42-203ENST00000400259 ZNF493Q6ZR52 646 aa12.08□□□□□ -0.48
CDC42-203ENST00000400259 GLMPQ8WWB7 406 aa12.08□□□□□ -0.48
CDC42-203ENST00000400259 BORCS7Q96B45 105 aa12.08□□□□□ -0.48
CDC42-203ENST00000400259 M0QZ24 198 aa12.07□□□□□ -0.48
CDC42-203ENST00000400259 IGLV1-40P01703 118 aa12.07□□□□□ -0.48
CDC42-203ENST00000400259 C3orf79P0CE67 100 aa12.07□□□□□ -0.48
CDC42-203ENST00000400259 ZNF80P51504 273 aaPredicted RBP12.07□□□□□ -0.48
CDC42-203ENST00000400259 COL5A1-AS1Q5SY13 56 aa12.07□□□□□ -0.48
CDC42-203ENST00000400259 CHCHD1Q96BP2 118 aaKnown RBP12.07□□□□□ -0.48
CDC42-203ENST00000400259 CLEC5AQ9NY25 188 aa12.07□□□□□ -0.48
CDC42-203ENST00000400259 PRAC2D3DTV9 90 aa12.07□□□□□ -0.48
CDC42-203ENST00000400259 BLCAPP62952 87 aa12.07□□□□□ -0.48
CDC42-203ENST00000400259 CFHR3Q02985 330 aa12.07□□□□□ -0.48
CDC42-203ENST00000400259 RNASEKQ6P5S7 137 aaKnown RBP12.07□□□□□ -0.48
CDC42-203ENST00000400259 C8orf86Q6ZUL3 223 aa12.07□□□□□ -0.48
CDC42-203ENST00000400259 C20orf202A1L168 122 aa12.06□□□□□ -0.48
CDC42-203ENST00000400259 ZNF207O43670 478 aaKnown RBP12.06□□□□□ -0.48
CDC42-203ENST00000400259 CTRLP40313 264 aa12.06□□□□□ -0.48
CDC42-203ENST00000400259 ZNF705AQ6ZN79 300 aaPredicted RBP12.06□□□□□ -0.48
CDC42-203ENST00000400259 RNF182Q8N6D2 247 aa12.06□□□□□ -0.48
CDC42-203ENST00000400259 PSMG3-AS1Q96PY0 264 aa12.06□□□□□ -0.48
CDC42-203ENST00000400259 C20orf144Q9BQM9 153 aa12.06□□□□□ -0.48
CDC42-203ENST00000400259 UBR5O95071 2799 aaPredicted RBP12.06□□□□□ -0.48
CDC42-203ENST00000400259 LYZL1Q6UWQ5 148 aa12.06□□□□□ -0.48
CDC42-203ENST00000400259 UTP20O75691 2785 aaKnown RBP12.05□□□□□ -0.48
CDC42-203ENST00000400259 IGHV3OR16-13A0A075B7E8 117 aa12.05□□□□□ -0.48
CDC42-203ENST00000400259 IGHV3-74A0A0B4J1X5 117 aa12.05□□□□□ -0.48
CDC42-203ENST00000400259 TRBV12-3P01733 135 aa12.05□□□□□ -0.48
CDC42-203ENST00000400259 Q6ZS46 218 aa12.05□□□□□ -0.48
CDC42-203ENST00000400259 VAMP8Q9BV40 100 aa12.05□□□□□ -0.48
CDC42-203ENST00000400259 ANKRD17O75179 2603 aaKnown RBP12.05□□□□□ -0.48
CDC42-203ENST00000400259 ZNF462Q96JM2 2506 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 IGHV3-49A0A0A0MS15 119 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 M0R2Z0 102 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 IGLC6P0CF74 106 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 ERCC8Q13216 396 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 ZNF575Q86XF7 245 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 CR1P17927 2039 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 A0A0G2JLM5 398 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 FAM181BA6NEQ2 426 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 FABP5P3A8MUU1 101 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 LOXL1Q08397 574 aaPredicted RBP12.04□□□□□ -0.48
CDC42-203ENST00000400259 PMCHL1Q16048 86 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 UNQ9165/PRO28630Q6UXU0 137 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 ATOH7Q8N100 152 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 MIEN1Q9BRT3 115 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 KLK15Q9H2R5 256 aa12.04□□□□□ -0.48
CDC42-203ENST00000400259 PF4V1P10720 104 aa12.03□□□□□ -0.48
CDC42-203ENST00000400259 LINC01559Q495D7 138 aa12.03□□□□□ -0.48
CDC42-203ENST00000400259 EBLN2Q6P2I7 272 aa12.03□□□□□ -0.48
CDC42-203ENST00000400259 C9orf47Q6ZRZ4 202 aa12.03□□□□□ -0.48
CDC42-203ENST00000400259 C9orf139Q6ZV77 190 aa12.03□□□□□ -0.48
CDC42-203ENST00000400259 AGPAT4-IT1Q9H0P7 198 aa12.03□□□□□ -0.48
CDC42-203ENST00000400259 TMSB15BA0A087X1C1 80 aa12.03□□□□□ -0.48
CDC42-203ENST00000400259 DEFB112Q30KQ8 113 aa12.03□□□□□ -0.48
CDC42-203ENST00000400259 ORAOV1Q8WV07 137 aa12.03□□□□□ -0.48
CDC42-203ENST00000400259 TPPP3Q9BW30 176 aa12.03□□□□□ -0.48
CDC42-203ENST00000400259 FER1L6-AS1Q8NA97 138 aa12.02□□□□□ -0.49
CDC42-203ENST00000400259 OR4X2Q8NGF9 303 aa12.02□□□□□ -0.49
CDC42-203ENST00000400259 CNFNQ9BYD5 112 aa12.02□□□□□ -0.49
CDC42-203ENST00000400259 ZFYVE26Q68DK2 2539 aa12.02□□□□□ -0.49
CDC42-203ENST00000400259 ZNF138P52744 262 aa12.02□□□□□ -0.49
CDC42-203ENST00000400259 IL17RELQ6ZVW7 336 aa12.02□□□□□ -0.49
CDC42-203ENST00000400259 SPATA12Q7Z6I5 190 aa12.02□□□□□ -0.49
CDC42-203ENST00000400259 U3KQK5 164 aa12.02□□□□□ -0.49
CDC42-203ENST00000400259 C2orf70A6NJV1 201 aa12.01□□□□□ -0.49
CDC42-203ENST00000400259 SMAD7O15105 426 aaKnown RBP12.01□□□□□ -0.49
CDC42-203ENST00000400259 FSHBP01225 129 aa12.01□□□□□ -0.49
CDC42-203ENST00000400259 PTTG1IPP53801 180 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms