RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 C21orf62Q9NYP8 219 aa7.75□□□□□ -1.17
SMAD9-203ENST00000399275 UNC13CQ8NB66 2214 aa7.75□□□□□ -1.17
SMAD9-203ENST00000399275 FOXF2Q12947 444 aa7.75□□□□□ -1.17
SMAD9-203ENST00000399275 PVRIGQ6DKI7 326 aa7.75□□□□□ -1.17
SMAD9-203ENST00000399275 E9PLN8 166 aa7.75□□□□□ -1.17
SMAD9-203ENST00000399275 CCL21O00585 134 aa7.75□□□□□ -1.17
SMAD9-203ENST00000399275 ATP5EP56381 51 aaPredicted RBP7.75□□□□□ -1.17
SMAD9-203ENST00000399275 DCTN5Q9BTE1 182 aa7.75□□□□□ -1.17
SMAD9-203ENST00000399275 FREM3P0C091 2139 aa7.75□□□□□ -1.17
SMAD9-203ENST00000399275 SMIM27A0A1W2PRY6 76 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 NBR2O15453 112 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 NUPR1O60356 82 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 FUSP35637 526 aaKnown RBP eCLIP7.74□□□□□ -1.17
SMAD9-203ENST00000399275 PRDM6Q9NQX0 595 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 HIGD1BQ9P298 99 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 TP53TG1Q9Y2A0 90 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 TRAV3A0A0B4J244 114 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 IGKV1-6A0A0C4DH72 117 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 RPL35AP18077 110 aaKnown RBP7.74□□□□□ -1.17
SMAD9-203ENST00000399275 LYPD6Q86Y78 171 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 HEATR5BQ9P2D3 2071 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 RHODO00212 210 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 EXOC3-AS1Q8N2X6 119 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 VSIG2Q96IQ7 327 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 C14orf132Q9NPU4 83 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 VPREB3Q9UKI3 123 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 S4R3C0 116 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 RP1L1Q8IWN7 2480 aaPredicted RBP7.74□□□□□ -1.17
SMAD9-203ENST00000399275 IGLV3-1P01715 115 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 TET1Q8NFU7 2136 aa7.74□□□□□ -1.17
SMAD9-203ENST00000399275 IGKV1D-33P01593 117 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 IGKV1-33P01594 117 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 GFRALQ6UXV0 394 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 ZNF492Q9P255 531 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 LINC00312Q9Y6C7 94 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 DOCK11Q5JSL3 2073 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 TRAV23DV6A0A075B6W5 121 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 A0A087WX48 190 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 H0YJW9 148 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 C14orf178Q8N769 122 aaPredicted RBP7.73□□□□□ -1.17
SMAD9-203ENST00000399275 C11orf52Q96A22 123 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 TMEM213A2RRL7 107 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 IGHV3-23P01764 117 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 SCN5AQ14524 2016 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 IGKV2-40A0A087WW87 121 aaPredicted RBP7.73□□□□□ -1.17
SMAD9-203ENST00000399275 C16orf97H3BN30 126 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 IGKV2D-40P01614 121 aaPredicted RBP7.73□□□□□ -1.17
SMAD9-203ENST00000399275 GGNQ86UU5 652 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 C17orf82Q86X59 251 aaPredicted RBP7.73□□□□□ -1.17
SMAD9-203ENST00000399275 MLST8Q9BVC4 326 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 PRO0628Q9UI54 55 aa7.73□□□□□ -1.17
SMAD9-203ENST00000399275 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.72□□□□□ -1.17
SMAD9-203ENST00000399275 NDUFB8O95169 186 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 SIGLEC15Q6ZMC9 328 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 C5orf24Q7Z6I8 188 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 MED12Q93074 2177 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 B9A039 149 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 WISP1O95388 367 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 C1orf159Q96HA4 380 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 CYYR1Q96J86 154 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 HS3ST6Q96QI5 342 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 IGHV3OR16-8A0A075B7F1 116 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 A6NED7 52 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 K7EMI3 77 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 CRYGCP07315 174 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 LINC01545Q5VT33 79 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 C20orf204Q6ZNR8 217 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 ZNF329Q86UD4 541 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 Q8N1Y9 231 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 ICOSQ9Y6W8 199 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 ATG2BQ96BY7 2078 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 TRGV2A0A075B6R0 118 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 SPATA12Q7Z6I5 190 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 LINC01587Q99440 93 aa7.72□□□□□ -1.17
SMAD9-203ENST00000399275 ALPK2Q86TB3 2170 aa7.71□□□□□ -1.17
SMAD9-203ENST00000399275 THSD7BQ9C0I4 1608 aa7.71□□□□□ -1.17
SMAD9-203ENST00000399275 LINC00473A8K010 186 aa7.71□□□□□ -1.17
SMAD9-203ENST00000399275 PMS2P5A8MQ11 134 aa7.71□□□□□ -1.17
SMAD9-203ENST00000399275 COX7CP15954 63 aa7.71□□□□□ -1.17
SMAD9-203ENST00000399275 MRPL51Q4U2R6 128 aaKnown RBP7.71□□□□□ -1.17
SMAD9-203ENST00000399275 PRSS46E5RG02 174 aa7.71□□□□□ -1.18
SMAD9-203ENST00000399275 IGKV1-39P01597 117 aa7.71□□□□□ -1.18
SMAD9-203ENST00000399275 IGKV1D-39P04432 117 aa7.71□□□□□ -1.18
SMAD9-203ENST00000399275 Q86TA4 180 aa7.71□□□□□ -1.18
SMAD9-203ENST00000399275 DENND4AQ7Z401 1863 aa7.71□□□□□ -1.18
SMAD9-203ENST00000399275 IGHV1-2P23083 117 aa7.71□□□□□ -1.18
SMAD9-203ENST00000399275 SERP2Q8N6R1 65 aa7.71□□□□□ -1.18
SMAD9-203ENST00000399275 PSPNO60542 156 aa7.7□□□□□ -1.18
SMAD9-203ENST00000399275 ERCC8Q13216 396 aa7.7□□□□□ -1.18
SMAD9-203ENST00000399275 RPL36AP83881 106 aaKnown RBP7.7□□□□□ -1.18
SMAD9-203ENST00000399275 SERTAD4-AS1Q5TG53 156 aa7.7□□□□□ -1.18
SMAD9-203ENST00000399275 RPL36ALQ969Q0 106 aaKnown RBP7.7□□□□□ -1.18
SMAD9-203ENST00000399275 SIRPDQ9H106 197 aa7.7□□□□□ -1.18
SMAD9-203ENST00000399275 CELA3BP08861 270 aa7.7□□□□□ -1.18
SMAD9-203ENST00000399275 WIPF2Q8TF74 440 aaPredicted RBP7.7□□□□□ -1.18
SMAD9-203ENST00000399275 TRGV9Q99603 122 aa7.7□□□□□ -1.18
SMAD9-203ENST00000399275 ABCA1O95477 2261 aa7.7□□□□□ -1.18
SMAD9-203ENST00000399275 COLCA1Q6ZS62 124 aa7.7□□□□□ -1.18
SMAD9-203ENST00000399275 MBD3L2Q8NHZ7 208 aaPredicted RBP7.7□□□□□ -1.18
SMAD9-203ENST00000399275 NDUFC1O43677 76 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms