RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CEACAM3P40198 252 aa14.29□□□□□ -0.12
PCDHA1-202ENST00000394633 PAX8Q06710 450 aa14.29□□□□□ -0.12
PCDHA1-202ENST00000394633 LGALS9BQ3B8N2 356 aa14.29□□□□□ -0.12
PCDHA1-202ENST00000394633 LGALS9CQ6DKI2 356 aa14.29□□□□□ -0.12
PCDHA1-202ENST00000394633 ARPC1AQ92747 370 aa14.29□□□□□ -0.12
PCDHA1-202ENST00000394633 C21orf62Q9NYP8 219 aa14.29□□□□□ -0.12
PCDHA1-202ENST00000394633 ZNF80P51504 273 aaPredicted RBP14.29□□□□□ -0.12
PCDHA1-202ENST00000394633 RPS20P60866 119 aaKnown RBP14.29□□□□□ -0.12
PCDHA1-202ENST00000394633 Q8TAT8 98 aa14.29□□□□□ -0.12
PCDHA1-202ENST00000394633 TRAV8-6A0A0B4J262 113 aa14.28□□□□□ -0.12
PCDHA1-202ENST00000394633 SMKR1H3BMG3 65 aa14.28□□□□□ -0.12
PCDHA1-202ENST00000394633 SAPCD1Q5SSQ6 148 aa14.28□□□□□ -0.12
PCDHA1-202ENST00000394633 ZNF562Q6V9R5 426 aa14.28□□□□□ -0.12
PCDHA1-202ENST00000394633 TTC9CQ8N5M4 171 aa14.28□□□□□ -0.12
PCDHA1-202ENST00000394633 CENPEQ02224 2701 aa14.27□□□□□ -0.12
PCDHA1-202ENST00000394633 RPL7P18124 248 aaKnown RBP14.27□□□□□ -0.12
PCDHA1-202ENST00000394633 CACNG7P62955 275 aa14.27□□□□□ -0.12
PCDHA1-202ENST00000394633 TMEM97Q5BJF2 176 aa14.27□□□□□ -0.12
PCDHA1-202ENST00000394633 VGLL1Q99990 258 aa14.27□□□□□ -0.12
PCDHA1-202ENST00000394633 SMAD5-AS1Q9Y6J3 95 aa14.27□□□□□ -0.12
PCDHA1-202ENST00000394633 NPYP01303 97 aa14.27□□□□□ -0.13
PCDHA1-202ENST00000394633 HBDP02042 147 aa14.27□□□□□ -0.13
PCDHA1-202ENST00000394633 HLA-DMBP28068 263 aa14.27□□□□□ -0.13
PCDHA1-202ENST00000394633 IGFL4Q6B9Z1 124 aa14.27□□□□□ -0.13
PCDHA1-202ENST00000394633 ZNF575Q86XF7 245 aa14.27□□□□□ -0.13
PCDHA1-202ENST00000394633 IGHG4P01861 327 aa14.26□□□□□ -0.13
PCDHA1-202ENST00000394633 FER1L6-AS1Q8NA97 138 aa14.26□□□□□ -0.13
PCDHA1-202ENST00000394633 SVEP1Q4LDE5 3571 aa14.26□□□□□ -0.13
PCDHA1-202ENST00000394633 CSMD1Q96PZ7 3565 aa14.26□□□□□ -0.13
PCDHA1-202ENST00000394633 IGLC6P0CF74 106 aa14.26□□□□□ -0.13
PCDHA1-202ENST00000394633 DYNAPQ8N1N2 210 aa14.26□□□□□ -0.13
PCDHA1-202ENST00000394633 ARL6IP6Q8N6S5 226 aa14.26□□□□□ -0.13
PCDHA1-202ENST00000394633 OR1N2Q8NGR9 330 aa14.26□□□□□ -0.13
PCDHA1-202ENST00000394633 M0R1W7 72 aa14.25□□□□□ -0.13
PCDHA1-202ENST00000394633 PRTN3P24158 256 aa14.25□□□□□ -0.13
PCDHA1-202ENST00000394633 CKS2P33552 79 aa14.25□□□□□ -0.13
PCDHA1-202ENST00000394633 TWIST1Q15672 202 aa14.25□□□□□ -0.13
PCDHA1-202ENST00000394633 PEF1Q9UBV8 284 aaKnown RBP14.25□□□□□ -0.13
PCDHA1-202ENST00000394633 RABAC1Q9UI14 185 aa14.25□□□□□ -0.13
PCDHA1-202ENST00000394633 C7orf71A4D174 169 aa14.25□□□□□ -0.13
PCDHA1-202ENST00000394633 NCBP2LA6PVI3 153 aaKnown RBP14.25□□□□□ -0.13
PCDHA1-202ENST00000394633 SEC11AP67812 179 aa14.25□□□□□ -0.13
PCDHA1-202ENST00000394633 CST9LQ9H4G1 147 aa14.25□□□□□ -0.13
PCDHA1-202ENST00000394633 CTSGP08311 255 aa14.24□□□□□ -0.13
PCDHA1-202ENST00000394633 TCTAP57738 103 aa14.24□□□□□ -0.13
PCDHA1-202ENST00000394633 BOD1L2Q8IYS8 172 aa14.24□□□□□ -0.13
PCDHA1-202ENST00000394633 IFI27L1Q96BM0 104 aa14.24□□□□□ -0.13
PCDHA1-202ENST00000394633 PSMG3-AS1Q96PY0 264 aa14.24□□□□□ -0.13
PCDHA1-202ENST00000394633 FBLL1A6NHQ2 334 aaKnown RBP14.23□□□□□ -0.13
PCDHA1-202ENST00000394633 BMI1P35226 326 aa14.23□□□□□ -0.13
PCDHA1-202ENST00000394633 RNF151Q2KHN1 245 aa14.23□□□□□ -0.13
PCDHA1-202ENST00000394633 SPG11Q96JI7 2443 aa14.23□□□□□ -0.13
PCDHA1-202ENST00000394633 CELSR2Q9HCU4 2923 aa14.23□□□□□ -0.13
PCDHA1-202ENST00000394633 Q8N6K4 173 aa14.23□□□□□ -0.13
PCDHA1-202ENST00000394633 MSRB1Q9NZV6 116 aa14.23□□□□□ -0.13
PCDHA1-202ENST00000394633 THYN1Q9P016 225 aa14.23□□□□□ -0.13
PCDHA1-202ENST00000394633 MAP1AP78559 2803 aaPredicted RBP14.23□□□□□ -0.13
PCDHA1-202ENST00000394633 TENM4Q6N022 2769 aa14.23□□□□□ -0.13
PCDHA1-202ENST00000394633 IGHV3OR16-8A0A075B7F1 116 aa14.22□□□□□ -0.13
PCDHA1-202ENST00000394633 SMAD7O15105 426 aaKnown RBP14.22□□□□□ -0.13
PCDHA1-202ENST00000394633 RNF185Q96GF1 192 aa14.22□□□□□ -0.13
PCDHA1-202ENST00000394633 NDUFS7O75251 213 aa14.22□□□□□ -0.13
PCDHA1-202ENST00000394633 TIMD4Q96H15 378 aa14.22□□□□□ -0.13
PCDHA1-202ENST00000394633 SRSF1Q07955 248 aaKnown RBP eCLIP14.21□□□□□ -0.13
PCDHA1-202ENST00000394633 VMO1Q7Z5L0 202 aa14.21□□□□□ -0.13
PCDHA1-202ENST00000394633 IGHV3-35A0A0C4DH35 117 aa14.21□□□□□ -0.14
PCDHA1-202ENST00000394633 SRSF2Q01130 221 aaKnown RBP14.21□□□□□ -0.14
PCDHA1-202ENST00000394633 OCIAD2Q56VL3 154 aa14.21□□□□□ -0.14
PCDHA1-202ENST00000394633 C11orf71Q6IPW1 123 aa14.21□□□□□ -0.14
PCDHA1-202ENST00000394633 WFDC3Q8IUB2 231 aa14.21□□□□□ -0.14
PCDHA1-202ENST00000394633 FBN2P35556 2912 aa14.2□□□□□ -0.14
PCDHA1-202ENST00000394633 GAS8-AS1O95177 125 aa14.2□□□□□ -0.14
PCDHA1-202ENST00000394633 ORM1P02763 201 aa14.2□□□□□ -0.14
PCDHA1-202ENST00000394633 PRSS57Q6UWY2 283 aa14.2□□□□□ -0.14
PCDHA1-202ENST00000394633 IGHV7-81A0A0B4J1V7 117 aa14.19□□□□□ -0.14
PCDHA1-202ENST00000394633 PPBPP02775 128 aa14.19□□□□□ -0.14
PCDHA1-202ENST00000394633 ERCC8Q13216 396 aa14.19□□□□□ -0.14
PCDHA1-202ENST00000394633 CCDC144NLQ6NUI1 221 aa14.19□□□□□ -0.14
PCDHA1-202ENST00000394633 DKK2Q9UBU2 259 aa14.19□□□□□ -0.14
PCDHA1-202ENST00000394633 A1L4Q6 167 aa14.19□□□□□ -0.14
PCDHA1-202ENST00000394633 EBI3Q14213 229 aa14.19□□□□□ -0.14
PCDHA1-202ENST00000394633 OR9G4Q8NGQ1 327 aa14.19□□□□□ -0.14
PCDHA1-202ENST00000394633 CNFNQ9BYD5 112 aa14.19□□□□□ -0.14
PCDHA1-202ENST00000394633 NPFFR1Q9GZQ6 430 aa14.19□□□□□ -0.14
PCDHA1-202ENST00000394633 USP9YO00507 2555 aaPredicted RBP14.19□□□□□ -0.14
PCDHA1-202ENST00000394633 GAGE12BA1L429 117 aa14.18□□□□□ -0.14
PCDHA1-202ENST00000394633 PRAC2D3DTV9 90 aa14.18□□□□□ -0.14
PCDHA1-202ENST00000394633 TMEM11P17152 192 aa14.18□□□□□ -0.14
PCDHA1-202ENST00000394633 ADAMTSL5Q6ZMM2 481 aa14.18□□□□□ -0.14
PCDHA1-202ENST00000394633 MAP1LC3AQ9H492 121 aa14.18□□□□□ -0.14
PCDHA1-202ENST00000394633 FABP5P3A8MUU1 101 aa14.18□□□□□ -0.14
PCDHA1-202ENST00000394633 H3BRM9 83 aa14.18□□□□□ -0.14
PCDHA1-202ENST00000394633 SCGB2A1O75556 95 aa14.18□□□□□ -0.14
PCDHA1-202ENST00000394633 HSD52Q0P140 79 aa14.18□□□□□ -0.14
PCDHA1-202ENST00000394633 PCP2Q8IVA1 136 aa14.18□□□□□ -0.14
PCDHA1-202ENST00000394633 C18orf15Q96N68 181 aa14.18□□□□□ -0.14
PCDHA1-202ENST00000394633 JMJD8Q96S16 334 aa14.18□□□□□ -0.14
PCDHA1-202ENST00000394633 UBTD1Q9HAC8 227 aa14.18□□□□□ -0.14
PCDHA1-202ENST00000394633 LINC01546A6NGU7 62 aa14.17□□□□□ -0.14
PCDHA1-202ENST00000394633 C9orf118A6NHY6 69 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms