RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 H3BMG7 143 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 CST7O76096 145 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 IGHG4P01861 327 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 C3orf79P0CE67 100 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 GZMMP51124 257 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 SH2D6Q7Z4S9 175 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 ATP6V0E2Q8NHE4 81 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 MYOZ3Q8TDC0 251 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 CNTFRP26992 372 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 FOXI1Q12951 378 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 MMD2Q8IY49 270 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 IGKV1D-33P01593 117 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 IGKV1-33P01594 117 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 RPS28P62857 69 aaKnown RBP6.48□□□□□ -1.37
LIMS1-203ENST00000393310 RRN3P1Q2M238 152 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 CYP2G1PQ6ZSU1 146 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 ZNRF2Q8NHG8 242 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 RNF5Q99942 180 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 ITPR3Q14573 2671 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 PRSS1P07477 247 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 CSN3P07498 182 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 ASAH2BP0C7U1 165 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 RND2P52198 227 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 TMEM91Q6ZNR0 172 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 ZNF826PQ6ZT77 177 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 C5orf24Q7Z6I8 188 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 APRG1Q8IVJ8 170 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 TEX45Q8NA69 505 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 OR8A1Q8NGG7 326 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 A8MWL6 223 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 SDF2L1Q9HCN8 221 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 CALYQ9NYX4 217 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 HEATR5BQ9P2D3 2071 aa6.48□□□□□ -1.37
LIMS1-203ENST00000393310 EBLN2Q6P2I7 272 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 SFTA2Q6UW10 78 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 LY6G5BQ8NDX9 201 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 TMEM243Q9BU79 118 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 AAMDCQ9H7C9 122 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 PHF3Q92576 2039 aaKnown RBP6.47□□□□□ -1.37
LIMS1-203ENST00000393310 WDR87Q6ZQQ6 2873 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 SOCS1O15524 211 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 FAM201AQ5SY85 155 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 NEGR1Q7Z3B1 354 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 TRAV1-2A0A0B4J238 106 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 WISP2O76076 250 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 FGF6P10767 208 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 LYPD6Q86Y78 171 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 BCL6BQ8N143 479 aaPredicted RBP6.47□□□□□ -1.37
LIMS1-203ENST00000393310 LRTM2Q8N967 370 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 CHST6Q9GZX3 395 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 CMC2Q9NRP2 79 aa6.47□□□□□ -1.37
LIMS1-203ENST00000393310 SNRNP200O75643 2136 aaKnown RBP6.47□□□□□ -1.37
LIMS1-203ENST00000393310 TEP1Q99973 2627 aaKnown RBP6.46□□□□□ -1.37
LIMS1-203ENST00000393310 LOC107984640A0A0U1RRK4 108 aa6.46□□□□□ -1.37
LIMS1-203ENST00000393310 F8VVB4 439 aa6.46□□□□□ -1.37
LIMS1-203ENST00000393310 F8VWA3 439 aa6.46□□□□□ -1.37
LIMS1-203ENST00000393310 FXYD1O00168 92 aa6.46□□□□□ -1.37
LIMS1-203ENST00000393310 OR11H6Q8NGC7 330 aa6.46□□□□□ -1.37
LIMS1-203ENST00000393310 NDUFC2-KCTD14E9PQ53 114 aa6.46□□□□□ -1.38
LIMS1-203ENST00000393310 RBMY1CP0DJD4 496 aa6.46□□□□□ -1.38
LIMS1-203ENST00000393310 H3BS24 57 aa6.46□□□□□ -1.38
LIMS1-203ENST00000393310 FAM19A2Q8N3H0 131 aa6.46□□□□□ -1.38
LIMS1-203ENST00000393310 OTOSQ8NHW6 89 aa6.46□□□□□ -1.38
LIMS1-203ENST00000393310 C20orf78Q9BR46 151 aa6.46□□□□□ -1.38
LIMS1-203ENST00000393310 SNRPD3P62318 126 aaKnown RBP6.46□□□□□ -1.38
LIMS1-203ENST00000393310 WFDC2Q14508 124 aa6.46□□□□□ -1.38
LIMS1-203ENST00000393310 PHLDA2Q53GA4 152 aa6.46□□□□□ -1.38
LIMS1-203ENST00000393310 FAM219BQ5XKK7 198 aa6.46□□□□□ -1.38
LIMS1-203ENST00000393310 AQP3Q92482 292 aa6.46□□□□□ -1.38
LIMS1-203ENST00000393310 RNF222A6NCQ9 220 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 UPK2O00526 184 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 LYPD3O95274 346 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 BRI3O95415 125 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 RNF182Q8N6D2 247 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 THAP8Q8NA92 274 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 NOTCH3Q9UM47 2321 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 IGHV1-8P0DP01 117 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 ADMP35318 185 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 Q6ZWC4 215 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 METTL26Q96S19 204 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 IFI27L2Q9H2X8 130 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 SMIM26A0A096LP01 95 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 CKS2P33552 79 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 CIRBPQ14011 172 aaKnown RBP6.45□□□□□ -1.38
LIMS1-203ENST00000393310 Q6AWC8 147 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 TTTY10Q9BZA0 68 aa6.45□□□□□ -1.38
LIMS1-203ENST00000393310 ZAR1LA6NP61 321 aa6.44□□□□□ -1.38
LIMS1-203ENST00000393310 H3BUA1 57 aa6.44□□□□□ -1.38
LIMS1-203ENST00000393310 WISP3O95389 354 aaPredicted RBP6.44□□□□□ -1.38
LIMS1-203ENST00000393310 IGHV3-7P01780 117 aa6.44□□□□□ -1.38
LIMS1-203ENST00000393310 RFESDQ8TAC1 157 aa6.44□□□□□ -1.38
LIMS1-203ENST00000393310 EFNA2O43921 213 aa6.44□□□□□ -1.38
LIMS1-203ENST00000393310 MST1LQ2TV78 715 aa6.44□□□□□ -1.38
LIMS1-203ENST00000393310 Q499Y3 187 aa6.44□□□□□ -1.38
LIMS1-203ENST00000393310 ARTNQ5T4W7 220 aa6.44□□□□□ -1.38
LIMS1-203ENST00000393310 GAPTQ8N292 157 aa6.44□□□□□ -1.38
LIMS1-203ENST00000393310 UBALD1Q8TB05 177 aa6.44□□□□□ -1.38
LIMS1-203ENST00000393310 MALRD1Q5VYJ5 2156 aa6.44□□□□□ -1.38
LIMS1-203ENST00000393310 C11orf94C9JXX5 98 aa6.44□□□□□ -1.38
LIMS1-203ENST00000393310 AMY1AP04745 511 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms