RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 TYMSP04818 313 aa13.21□□□□□ -0.29
MBD4-202ENST00000393278 ERCC8Q13216 396 aa13.21□□□□□ -0.29
MBD4-202ENST00000393278 SAMD13Q5VXD3 122 aa13.21□□□□□ -0.29
MBD4-202ENST00000393278 ZNF738Q8NE65 137 aa13.21□□□□□ -0.29
MBD4-202ENST00000393278 Q8TAT8 98 aa13.21□□□□□ -0.29
MBD4-202ENST00000393278 DAZAP1Q96EP5 407 aaKnown RBP13.21□□□□□ -0.29
MBD4-202ENST00000393278 C8orf49Q96NF6 230 aa13.21□□□□□ -0.29
MBD4-202ENST00000393278 SMIM27A0A1W2PRY6 76 aa13.21□□□□□ -0.3
MBD4-202ENST00000393278 M0QZ24 198 aa13.21□□□□□ -0.3
MBD4-202ENST00000393278 CA1P00915 261 aaPredicted RBP13.21□□□□□ -0.3
MBD4-202ENST00000393278 P01737 135 aa13.21□□□□□ -0.3
MBD4-202ENST00000393278 FHL3Q13643 280 aa13.21□□□□□ -0.3
MBD4-202ENST00000393278 ADAMTSL5Q6ZMM2 481 aa13.21□□□□□ -0.3
MBD4-202ENST00000393278 OR9G4Q8NGQ1 327 aa13.21□□□□□ -0.3
MBD4-202ENST00000393278 DCANP1Q8TF63 244 aa13.21□□□□□ -0.3
MBD4-202ENST00000393278 DLX4Q92988 240 aaPredicted RBP13.21□□□□□ -0.3
MBD4-202ENST00000393278 RAX2Q96IS3 184 aa13.21□□□□□ -0.3
MBD4-202ENST00000393278 RPP21Q9H633 154 aaKnown RBP13.21□□□□□ -0.3
MBD4-202ENST00000393278 SRD5A3Q9H8P0 318 aa13.21□□□□□ -0.3
MBD4-202ENST00000393278 PEMTQ9UBM1 199 aa13.21□□□□□ -0.3
MBD4-202ENST00000393278 NSD1Q96L73 2696 aaPredicted RBP13.21□□□□□ -0.3
MBD4-202ENST00000393278 A0A1W2PRX2 142 aa13.2□□□□□ -0.3
MBD4-202ENST00000393278 NPIPB6E9PJ23 425 aa13.2□□□□□ -0.3
MBD4-202ENST00000393278 FN1P02751 2386 aaKnown RBP13.2□□□□□ -0.3
MBD4-202ENST00000393278 CT45A10P0DMU9 189 aa13.19□□□□□ -0.3
MBD4-202ENST00000393278 CRIP1P50238 77 aa13.19□□□□□ -0.3
MBD4-202ENST00000393278 CT83Q5H943 113 aa13.19□□□□□ -0.3
MBD4-202ENST00000393278 C9orf47Q6ZRZ4 202 aa13.19□□□□□ -0.3
MBD4-202ENST00000393278 NDFIP1Q9BT67 221 aa13.19□□□□□ -0.3
MBD4-202ENST00000393278 GPR61Q9BZJ8 451 aa13.19□□□□□ -0.3
MBD4-202ENST00000393278 AGPAT4-IT1Q9H0P7 198 aa13.19□□□□□ -0.3
MBD4-202ENST00000393278 MS4A6AQ9H2W1 248 aa13.19□□□□□ -0.3
MBD4-202ENST00000393278 ID1P41134 155 aa13.18□□□□□ -0.3
MBD4-202ENST00000393278 RAB5BP61020 215 aa13.18□□□□□ -0.3
MBD4-202ENST00000393278 SRSF2Q01130 221 aaKnown RBP13.18□□□□□ -0.3
MBD4-202ENST00000393278 TMEM78Q5T7P6 136 aa13.18□□□□□ -0.3
MBD4-202ENST00000393278 OR4B1Q8NGF8 309 aa13.18□□□□□ -0.3
MBD4-202ENST00000393278 TSKUQ8WUA8 353 aa13.18□□□□□ -0.3
MBD4-202ENST00000393278 CCL24O00175 119 aa13.18□□□□□ -0.3
MBD4-202ENST00000393278 OVOL1O14753 267 aa13.18□□□□□ -0.3
MBD4-202ENST00000393278 TCL1AP56279 114 aa13.18□□□□□ -0.3
MBD4-202ENST00000393278 ZFP82Q8N141 532 aa13.18□□□□□ -0.3
MBD4-202ENST00000393278 PPP1R14DQ9NXH3 145 aa13.18□□□□□ -0.3
MBD4-202ENST00000393278 TRGC2P03986 189 aa13.17□□□□□ -0.3
MBD4-202ENST00000393278 CSN3P07498 182 aa13.17□□□□□ -0.3
MBD4-202ENST00000393278 ZNF138P52744 262 aa13.17□□□□□ -0.3
MBD4-202ENST00000393278 WFDC3Q8IUB2 231 aa13.17□□□□□ -0.3
MBD4-202ENST00000393278 A8MWL6 223 aa13.16□□□□□ -0.3
MBD4-202ENST00000393278 K7EQG2 157 aa13.16□□□□□ -0.3
MBD4-202ENST00000393278 SMUG1Q53HV7 270 aa13.16□□□□□ -0.3
MBD4-202ENST00000393278 LURAP1LQ8IV03 231 aa13.16□□□□□ -0.3
MBD4-202ENST00000393278 IZUMO1RA6ND01 250 aa13.15□□□□□ -0.3
MBD4-202ENST00000393278 FAM162BQ5T6X4 162 aa13.15□□□□□ -0.3
MBD4-202ENST00000393278 OR2D3Q8NGH3 330 aa13.15□□□□□ -0.3
MBD4-202ENST00000393278 OR10J6PQ8NGY7 276 aa13.15□□□□□ -0.3
MBD4-202ENST00000393278 NEU1Q99519 415 aa13.15□□□□□ -0.3
MBD4-202ENST00000393278 SH2D1AO60880 128 aa13.15□□□□□ -0.31
MBD4-202ENST00000393278 ZNF705DP0CH99 300 aaPredicted RBP13.15□□□□□ -0.31
MBD4-202ENST00000393278 ZNF705BP0CI00 300 aaPredicted RBP13.15□□□□□ -0.31
MBD4-202ENST00000393278 TFPI2P48307 235 aa13.15□□□□□ -0.31
MBD4-202ENST00000393278 ZNF80P51504 273 aaPredicted RBP13.15□□□□□ -0.31
MBD4-202ENST00000393278 OR8A1Q8NGG7 326 aa13.15□□□□□ -0.31
MBD4-202ENST00000393278 LINC00477Q96M19 166 aa13.15□□□□□ -0.31
MBD4-202ENST00000393278 GFRA4Q9GZZ7 299 aa13.15□□□□□ -0.31
MBD4-202ENST00000393278 NAT8BQ9UHF3 227 aa13.15□□□□□ -0.31
MBD4-202ENST00000393278 LENEPQ9Y5L5 61 aa13.15□□□□□ -0.31
MBD4-202ENST00000393278 ADARB2-AS1A8MUL3 147 aa13.14□□□□□ -0.31
MBD4-202ENST00000393278 PHOX2AO14813 284 aa13.14□□□□□ -0.31
MBD4-202ENST00000393278 DEFB1P60022 68 aa13.14□□□□□ -0.31
MBD4-202ENST00000393278 RPL19P84098 196 aaKnown RBP13.14□□□□□ -0.31
MBD4-202ENST00000393278 NUP35Q8NFH5 326 aa13.14□□□□□ -0.31
MBD4-202ENST00000393278 FAM231BA6NCW3 169 aa13.13□□□□□ -0.31
MBD4-202ENST00000393278 HIGD1CA8MV81 97 aa13.13□□□□□ -0.31
MBD4-202ENST00000393278 SNRPD3P62318 126 aaKnown RBP13.13□□□□□ -0.31
MBD4-202ENST00000393278 PAFAH1B2P68402 229 aa13.13□□□□□ -0.31
MBD4-202ENST00000393278 A0A1B0GUS0 222 aa13.12□□□□□ -0.31
MBD4-202ENST00000393278 F6UB75 175 aa13.12□□□□□ -0.31
MBD4-202ENST00000393278 ZNF688P0C7X2 276 aa13.12□□□□□ -0.31
MBD4-202ENST00000393278 KRTAP10-3P60369 221 aa13.12□□□□□ -0.31
MBD4-202ENST00000393278 HIST1H1AQ02539 215 aaPredicted RBP13.12□□□□□ -0.31
MBD4-202ENST00000393278 ACTL10Q5JWF8 245 aa13.12□□□□□ -0.31
MBD4-202ENST00000393278 DYNLRB2Q8TF09 96 aa13.12□□□□□ -0.31
MBD4-202ENST00000393278 GTSF1Q8WW33 167 aa13.12□□□□□ -0.31
MBD4-202ENST00000393278 LOC105371267A0A1B0GV96 52 aa13.12□□□□□ -0.31
MBD4-202ENST00000393278 SPINK4O60575 86 aa13.12□□□□□ -0.31
MBD4-202ENST00000393278 TRAV2A0A0B4J234 112 aa13.11□□□□□ -0.31
MBD4-202ENST00000393278 FABP5P3A8MUU1 101 aa13.11□□□□□ -0.31
MBD4-202ENST00000393278 DEFB114Q30KQ6 69 aa13.11□□□□□ -0.31
MBD4-202ENST00000393278 PSMG4Q5JS54 123 aa13.11□□□□□ -0.31
MBD4-202ENST00000393278 NDUFA11Q86Y39 141 aa13.11□□□□□ -0.31
MBD4-202ENST00000393278 TMEM61Q8N0U2 210 aa13.11□□□□□ -0.31
MBD4-202ENST00000393278 FRZBQ92765 325 aa13.11□□□□□ -0.31
MBD4-202ENST00000393278 F8P00451 2351 aa13.1□□□□□ -0.31
MBD4-202ENST00000393278 FRMD6-AS1P0C7T7 363 aa13.1□□□□□ -0.31
MBD4-202ENST00000393278 GZMBP10144 247 aa13.1□□□□□ -0.31
MBD4-202ENST00000393278 NSUN5P1Q3KNT7 163 aa13.1□□□□□ -0.31
MBD4-202ENST00000393278 MRPL54Q6P161 138 aaKnown RBP13.1□□□□□ -0.31
MBD4-202ENST00000393278 RBPMS2Q6ZRY4 209 aaKnown RBP13.1□□□□□ -0.31
MBD4-202ENST00000393278 FAM19A4Q96LR4 140 aa13.1□□□□□ -0.31
MBD4-202ENST00000393278 SIGLEC8Q9NYZ4 499 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms