RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.77□□□□□ -0.681e-7■■■□□ 15.1
GSE1-202ENST00000393243 MRPL27Q9P0M9 148 aaKnown RBP10.77□□□□□ -0.68
GSE1-202ENST00000393243 A0A1B0GW64 132 aa10.77□□□□□ -0.68
GSE1-202ENST00000393243 QRFPP83859 136 aa10.77□□□□□ -0.68
GSE1-202ENST00000393243 MRPL51Q4U2R6 128 aaKnown RBP10.77□□□□□ -0.68
GSE1-202ENST00000393243 MMP23AO75900 390 aa10.77□□□□□ -0.69
GSE1-202ENST00000393243 TPSG1Q9NRR2 321 aa10.77□□□□□ -0.69
GSE1-202ENST00000393243 TRPM7Q96QT4 1865 aa10.77□□□□□ -0.69
GSE1-202ENST00000393243 HLA-DRB4P13762 266 aa10.77□□□□□ -0.69
GSE1-202ENST00000393243 OVOL2Q9BRP0 275 aa10.77□□□□□ -0.69
GSE1-202ENST00000393243 HLA-DRB4X5D2U9 266 aa10.77□□□□□ -0.69
GSE1-202ENST00000393243 CRLF1O75462 422 aa10.77□□□□□ -0.69
GSE1-202ENST00000393243 THSD7AQ9UPZ6 1657 aa10.77□□□□□ -0.69
GSE1-202ENST00000393243 I3L3M4 83 aa10.77□□□□□ -0.69
GSE1-202ENST00000393243 IGHG3P01860 377 aa10.77□□□□□ -0.69
GSE1-202ENST00000393243 A0A0J9YY99 117 aa10.76□□□□□ -0.69
GSE1-202ENST00000393243 SLAQ13239 276 aa10.76□□□□□ -0.69
GSE1-202ENST00000393243 KLF5Q13887 457 aaPredicted RBP10.76□□□□□ -0.69
GSE1-202ENST00000393243 TAL2Q16559 108 aa10.76□□□□□ -0.69
GSE1-202ENST00000393243 SP5Q6BEB4 398 aaPredicted RBP10.76□□□□□ -0.69
GSE1-202ENST00000393243 C18orf32Q8TCD1 76 aa10.76□□□□□ -0.69
GSE1-202ENST00000393243 PRSS29PA6NIE9 313 aa10.76□□□□□ -0.69
GSE1-202ENST00000393243 CSRP1P21291 193 aaKnown RBP10.76□□□□□ -0.69
GSE1-202ENST00000393243 ROS1P08922 2347 aa10.76□□□□□ -0.69
GSE1-202ENST00000393243 LINC01619G3V211 115 aa10.75□□□□□ -0.69
GSE1-202ENST00000393243 NPSP0C0P6 89 aa10.75□□□□□ -0.69
GSE1-202ENST00000393243 IGHV1-24A0A0C4DH33 117 aa10.75□□□□□ -0.69
GSE1-202ENST00000393243 C8orf86Q6ZUL3 223 aa10.75□□□□□ -0.69
GSE1-202ENST00000393243 COL4A6Q14031 1691 aa10.75□□□□□ -0.69
GSE1-202ENST00000393243 CACNA1BQ00975 2339 aa10.75□□□□□ -0.69
GSE1-202ENST00000393243 LINC01559Q495D7 138 aa10.75□□□□□ -0.69
GSE1-202ENST00000393243 ARTNQ5T4W7 220 aa10.75□□□□□ -0.69
GSE1-202ENST00000393243 ANGP03950 147 aaKnown RBP10.75□□□□□ -0.69
GSE1-202ENST00000393243 TCTEX1D4Q5JR98 221 aa10.75□□□□□ -0.69
GSE1-202ENST00000393243 MRPL52Q86TS9 123 aaKnown RBP10.75□□□□□ -0.69
GSE1-202ENST00000393243 TMEM75Q8N9X5 138 aa10.75□□□□□ -0.69
GSE1-202ENST00000393243 LYPD1Q8N2G4 141 aa10.75□□□□□ -0.69
GSE1-202ENST00000393243 IGKV1-6A0A0C4DH72 117 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 MDS2Q8NDY4 140 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 B3GALT5-AS1P59052 145 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 DIAPH2-AS1Q14236 149 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 ETDBQ3ZM63 59 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 FAM120AOSQ5T036 256 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 UNQ6494/PRO21346Q6UXR6 183 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 DSCR8Q96T75 97 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 PLXND1Q9Y4D7 1925 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 SDHAF1A6NFY7 115 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 PFN1P07737 140 aaKnown RBP10.74□□□□□ -0.69
GSE1-202ENST00000393243 USF3Q68DE3 2245 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 Q6ZQT7 251 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 CRYGCP07315 174 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 VWC2Q2TAL6 325 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 C5orf47Q569G3 176 aa10.74□□□□□ -0.69
GSE1-202ENST00000393243 H3BMG7 143 aa10.73□□□□□ -0.69
GSE1-202ENST00000393243 HLA-DMBP28068 263 aa10.73□□□□□ -0.69
GSE1-202ENST00000393243 Q9HAA7 133 aa10.73□□□□□ -0.69
GSE1-202ENST00000393243 RNF114Q9Y508 228 aa10.73□□□□□ -0.69
GSE1-202ENST00000393243 IGHV4-28A0A0C4DH34 117 aa10.73□□□□□ -0.69
GSE1-202ENST00000393243 MSMBP08118 114 aa10.73□□□□□ -0.69
GSE1-202ENST00000393243 A8MWP6 167 aa10.73□□□□□ -0.69
GSE1-202ENST00000393243 XCL1P47992 114 aa10.73□□□□□ -0.69
GSE1-202ENST00000393243 RNF5Q99942 180 aa10.73□□□□□ -0.69
GSE1-202ENST00000393243 KLF2Q9Y5W3 355 aaPredicted RBP10.73□□□□□ -0.69
GSE1-202ENST00000393243 AMTNQ6UX39 209 aa10.73□□□□□ -0.69
GSE1-202ENST00000393243 TMEM243Q9BU79 118 aa10.73□□□□□ -0.69
GSE1-202ENST00000393243 FAM104BQ5XKR9 115 aa10.73□□□□□ -0.69
GSE1-202ENST00000393243 CNOT1A5YKK6 2376 aaKnown RBP10.73□□□□□ -0.69
GSE1-202ENST00000393243 NOTCH3Q9UM47 2321 aa10.72□□□□□ -0.69
GSE1-202ENST00000393243 IGHG4P01861 327 aa10.72□□□□□ -0.69
GSE1-202ENST00000393243 Q6ZWC4 215 aa10.72□□□□□ -0.69
GSE1-202ENST00000393243 IGKV1OR2-108A0A075B7D4 117 aa10.72□□□□□ -0.69
GSE1-202ENST00000393243 WISP1O95388 367 aa10.72□□□□□ -0.69
GSE1-202ENST00000393243 PRSS46E5RG02 174 aa10.72□□□□□ -0.69
GSE1-202ENST00000393243 MRPL35Q9NZE8 188 aaKnown RBP10.72□□□□□ -0.69
GSE1-202ENST00000393243 MST1LQ2TV78 715 aa10.72□□□□□ -0.69
GSE1-202ENST00000393243 UBL5Q9BZL1 73 aa10.72□□□□□ -0.69
GSE1-202ENST00000393243 C9orf118A6NHY6 69 aa10.72□□□□□ -0.69
GSE1-202ENST00000393243 OOSP1A8MZH6 123 aa10.72□□□□□ -0.69
GSE1-202ENST00000393243 F6UB75 175 aa10.72□□□□□ -0.69
GSE1-202ENST00000393243 Q8N8P6 123 aa10.72□□□□□ -0.69
GSE1-202ENST00000393243 C17orf77Q96MU5 243 aa10.72□□□□□ -0.69
GSE1-202ENST00000393243 LY96Q9Y6Y9 160 aa10.72□□□□□ -0.69
GSE1-202ENST00000393243 SIPA1L1O43166 1804 aa10.71□□□□□ -0.69
GSE1-202ENST00000393243 IGHV1OR15-1A0A075B7D0 117 aa10.71□□□□□ -0.69
GSE1-202ENST00000393243 NDUFA12Q9UI09 145 aa10.71□□□□□ -0.69
GSE1-202ENST00000393243 CARD19Q96LW7 228 aa10.71□□□□□ -0.69
GSE1-202ENST00000393243 PKDREJQ9NTG1 2253 aa10.71□□□□□ -0.7
GSE1-202ENST00000393243 K7EMI3 77 aa10.71□□□□□ -0.7
GSE1-202ENST00000393243 SIGLEC8Q9NYZ4 499 aa10.71□□□□□ -0.7
GSE1-202ENST00000393243 ZNF726P1Q15940 193 aa10.71□□□□□ -0.7
GSE1-202ENST00000393243 Q6ZVH6 145 aa10.71□□□□□ -0.7
GSE1-202ENST00000393243 GFRA4Q9GZZ7 299 aa10.71□□□□□ -0.7
GSE1-202ENST00000393243 DKK2Q9UBU2 259 aa10.71□□□□□ -0.7
GSE1-202ENST00000393243 ZC2HC1AQ96GY0 325 aa10.7□□□□□ -0.7
GSE1-202ENST00000393243 SBF1O95248 1867 aa10.7□□□□□ -0.7
GSE1-202ENST00000393243 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.7□□□□□ -0.7
GSE1-202ENST00000393243 IGKV2-29A2NJV5 120 aaPredicted RBP10.7□□□□□ -0.7
GSE1-202ENST00000393243 CEND1Q8N111 149 aa10.7□□□□□ -0.7
GSE1-202ENST00000393243 IFITM1P13164 125 aa10.7□□□□□ -0.7
GSE1-202ENST00000393243 GNRH2O43555 120 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms