RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 CSTL1Q9H114 145 aa9.7□□□□□ -0.86
USP44-202ENST00000393091 WFDC10AQ9H1F0 79 aa9.7□□□□□ -0.86
USP44-202ENST00000393091 SELENOKQ9Y6D0 94 aa9.7□□□□□ -0.86
USP44-202ENST00000393091 MEGF8Q7Z7M0 2845 aa9.7□□□□□ -0.86
USP44-202ENST00000393091 IGKV3-7A0A075B6H7 116 aa9.7□□□□□ -0.86
USP44-202ENST00000393091 RAB19A4D1S5 217 aa9.7□□□□□ -0.86
USP44-202ENST00000393091 RBFOX3A6NFN3 312 aa9.7□□□□□ -0.86
USP44-202ENST00000393091 KNCNA6PVL3 124 aa9.7□□□□□ -0.86
USP44-202ENST00000393091 M0R3E3 92 aa9.7□□□□□ -0.86
USP44-202ENST00000393091 CRXO43186 299 aaPredicted RBP9.7□□□□□ -0.86
USP44-202ENST00000393091 Q6AWC8 147 aa9.7□□□□□ -0.86
USP44-202ENST00000393091 H3BTX0 84 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 K7EQM0 130 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 LTAP01374 205 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 TSPOP30536 169 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 TAS2R60P59551 318 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 NUTF2P61970 127 aaKnown RBP9.69□□□□□ -0.86
USP44-202ENST00000393091 SUMO1P63165 101 aaKnown RBP9.69□□□□□ -0.86
USP44-202ENST00000393091 ZNF124Q15973 351 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 ACTL10Q5JWF8 245 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 IGFL4Q6B9Z1 124 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 EIF3GO75821 320 aaKnown RBP eCLIP9.69□□□□□ -0.86
USP44-202ENST00000393091 ZNF705AQ6ZN79 300 aaPredicted RBP9.69□□□□□ -0.86
USP44-202ENST00000393091 CMTM2Q8TAZ6 248 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 RNF183Q96D59 192 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 ZFP30Q9Y2G7 519 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 C11orf94C9JXX5 98 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 HAGHQ16775 308 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 TMEM256Q8N2U0 113 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 ZFAND2AQ8N6M9 145 aa9.69□□□□□ -0.86
USP44-202ENST00000393091 ATP5G3P48201 142 aa9.68□□□□□ -0.86
USP44-202ENST00000393091 IGF2BP2-AS1Q96M15 143 aa9.68□□□□□ -0.86
USP44-202ENST00000393091 VGLL1Q99990 258 aa9.68□□□□□ -0.86
USP44-202ENST00000393091 LY96Q9Y6Y9 160 aa9.68□□□□□ -0.86
USP44-202ENST00000393091 HUWE1Q7Z6Z7 4374 aaKnown RBP9.68□□□□□ -0.86
USP44-202ENST00000393091 SORL1Q92673 2214 aa9.68□□□□□ -0.86
USP44-202ENST00000393091 ZNF705DP0CH99 300 aaPredicted RBP9.68□□□□□ -0.86
USP44-202ENST00000393091 ZNF705BP0CI00 300 aaPredicted RBP9.68□□□□□ -0.86
USP44-202ENST00000393091 MLST8Q9BVC4 326 aa9.68□□□□□ -0.86
USP44-202ENST00000393091 PRKDCP78527 4128 aaKnown RBP9.68□□□□□ -0.86
USP44-202ENST00000393091 LINC00862A6NCI5 91 aa9.67□□□□□ -0.86
USP44-202ENST00000393091 SAPCD1Q5SSQ6 148 aa9.67□□□□□ -0.86
USP44-202ENST00000393091 GNG13Q9P2W3 67 aa9.67□□□□□ -0.86
USP44-202ENST00000393091 SMIM9A6NGZ8 99 aa9.67□□□□□ -0.86
USP44-202ENST00000393091 F6UB75 175 aa9.67□□□□□ -0.86
USP44-202ENST00000393091 CDKN1BP46527 198 aa9.67□□□□□ -0.86
USP44-202ENST00000393091 TMEM78Q5T7P6 136 aa9.67□□□□□ -0.86
USP44-202ENST00000393091 MRAPQ8TCY5 172 aa9.67□□□□□ -0.86
USP44-202ENST00000393091 TUBA4BQ9H853 241 aa9.67□□□□□ -0.86
USP44-202ENST00000393091 NBEAL1Q6ZS30 2694 aa9.67□□□□□ -0.86
USP44-202ENST00000393091 C9JCJ5 164 aa9.67□□□□□ -0.86
USP44-202ENST00000393091 ZNF324O75467 553 aaPredicted RBP9.67□□□□□ -0.86
USP44-202ENST00000393091 Q86TA4 180 aa9.67□□□□□ -0.86
USP44-202ENST00000393091 DNLZQ5SXM8 178 aa9.66□□□□□ -0.86
USP44-202ENST00000393091 TVP23CQ96ET8 276 aa9.66□□□□□ -0.86
USP44-202ENST00000393091 IGKV2-40A0A087WW87 121 aaPredicted RBP9.66□□□□□ -0.86
USP44-202ENST00000393091 IGKV2D-40P01614 121 aaPredicted RBP9.66□□□□□ -0.86
USP44-202ENST00000393091 DEFA6Q01524 100 aa9.66□□□□□ -0.86
USP44-202ENST00000393091 HIST1H1AQ02539 215 aaPredicted RBP9.66□□□□□ -0.86
USP44-202ENST00000393091 UQCC3Q6UW78 93 aa9.66□□□□□ -0.86
USP44-202ENST00000393091 PSG8Q9UQ74 426 aa9.66□□□□□ -0.86
USP44-202ENST00000393091 RAB14P61106 215 aa9.65□□□□□ -0.86
USP44-202ENST00000393091 FLI1Q01543 452 aaPredicted RBP9.65□□□□□ -0.86
USP44-202ENST00000393091 GOLT1AQ6ZVE7 132 aa9.65□□□□□ -0.86
USP44-202ENST00000393091 UBE2G2P60604 165 aa9.65□□□□□ -0.86
USP44-202ENST00000393091 GNG5P63218 68 aa9.65□□□□□ -0.86
USP44-202ENST00000393091 TDRG1Q3Y452 100 aa9.65□□□□□ -0.87
USP44-202ENST00000393091 FAM74A3Q4VXF1 159 aa9.65□□□□□ -0.87
USP44-202ENST00000393091 TMEM183AQ8IXX5 376 aa9.65□□□□□ -0.87
USP44-202ENST00000393091 SPATA25Q9BR10 227 aa9.65□□□□□ -0.87
USP44-202ENST00000393091 C11orf68Q9H3H3 251 aaKnown RBP9.65□□□□□ -0.87
USP44-202ENST00000393091 SRP19P09132 144 aaKnown RBP9.64□□□□□ -0.87
USP44-202ENST00000393091 ERCC8Q13216 396 aa9.64□□□□□ -0.87
USP44-202ENST00000393091 SBSPONQ8IVN8 264 aa9.64□□□□□ -0.87
USP44-202ENST00000393091 OVOL2Q9BRP0 275 aa9.64□□□□□ -0.87
USP44-202ENST00000393091 FBN3Q75N90 2809 aa9.64□□□□□ -0.87
USP44-202ENST00000393091 SCO2A0A1W2PP80 73 aa9.64□□□□□ -0.87
USP44-202ENST00000393091 DEFB1P60022 68 aa9.64□□□□□ -0.87
USP44-202ENST00000393091 INSP01308 110 aa9.63□□□□□ -0.87
USP44-202ENST00000393091 SNRPCP09234 159 aaKnown RBP9.63□□□□□ -0.87
USP44-202ENST00000393091 CXCL1P09341 107 aa9.63□□□□□ -0.87
USP44-202ENST00000393091 PEA15Q15121 130 aa9.63□□□□□ -0.87
USP44-202ENST00000393091 ANXA2RQ3ZCQ2 193 aa9.63□□□□□ -0.87
USP44-202ENST00000393091 CST9LP1Q5W188 147 aa9.63□□□□□ -0.87
USP44-202ENST00000393091 C1orf158Q8N1D5 194 aa9.63□□□□□ -0.87
USP44-202ENST00000393091 RARRES2Q99969 163 aa9.63□□□□□ -0.87
USP44-202ENST00000393091 C7orf71A4D174 169 aa9.63□□□□□ -0.87
USP44-202ENST00000393091 IL17DQ8TAD2 202 aa9.63□□□□□ -0.87
USP44-202ENST00000393091 PTH2Q96A98 100 aa9.63□□□□□ -0.87
USP44-202ENST00000393091 SLC35B3Q9H1N7 401 aa9.63□□□□□ -0.87
USP44-202ENST00000393091 IGLV2-8P01709 118 aa9.63□□□□□ -0.87
USP44-202ENST00000393091 ZNF674Q2M3X9 581 aa9.63□□□□□ -0.87
USP44-202ENST00000393091 SPRY2O43597 315 aa9.62□□□□□ -0.87
USP44-202ENST00000393091 AKR1C3P42330 323 aa9.62□□□□□ -0.87
USP44-202ENST00000393091 X6R8D5 127 aa9.62□□□□□ -0.87
USP44-202ENST00000393091 GFI1BQ5VTD9 330 aa9.62□□□□□ -0.87
USP44-202ENST00000393091 NDFIP1Q9BT67 221 aa9.62□□□□□ -0.87
USP44-202ENST00000393091 CA1P00915 261 aaPredicted RBP9.61□□□□□ -0.87
USP44-202ENST00000393091 RBMY1A1P0DJD3 496 aaKnown RBP9.61□□□□□ -0.87
USP44-202ENST00000393091 RBMY1CP0DJD4 496 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms