RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 LOC107984156A0A0G2JMH3 177 aa-0.65□□□□□ -2.51
SNORA40.3-201ENST00000390964 NBDYA0A0U1RRE5 68 aa-0.65□□□□□ -2.51
SNORA40.3-201ENST00000390964 SNRPD3P62318 126 aaKnown RBP-0.65□□□□□ -2.51
SNORA40.3-201ENST00000390964 GNG5P63218 68 aa-0.65□□□□□ -2.51
SNORA40.3-201ENST00000390964 HACD4Q5VWC8 232 aa-0.65□□□□□ -2.51
SNORA40.3-201ENST00000390964 ARL17AQ8IVW1 177 aa-0.65□□□□□ -2.51
SNORA40.3-201ENST00000390964 C5orf56Q8N8D9 126 aa-0.65□□□□□ -2.51
SNORA40.3-201ENST00000390964 PAIP2Q9BPZ3 127 aaKnown RBP-0.65□□□□□ -2.51
SNORA40.3-201ENST00000390964 OR2H1Q9GZK4 316 aa-0.65□□□□□ -2.51
SNORA40.3-201ENST00000390964 JMJD1CQ15652 2540 aa-0.65□□□□□ -2.51
SNORA40.3-201ENST00000390964 ANK1P16157 1881 aa-0.65□□□□□ -2.51
SNORA40.3-201ENST00000390964 TRPM7Q96QT4 1865 aa-0.65□□□□□ -2.51
SNORA40.3-201ENST00000390964 TANC1Q9C0D5 1861 aa-0.66□□□□□ -2.52
SNORA40.3-201ENST00000390964 IZUMO2Q6UXV1 221 aa-0.66□□□□□ -2.52
SNORA40.3-201ENST00000390964 CCL4L1Q8NHW4 92 aa-0.66□□□□□ -2.52
SNORA40.3-201ENST00000390964 MCEEQ96PE7 176 aa-0.66□□□□□ -2.52
SNORA40.3-201ENST00000390964 RTL8AQ9BWD3 113 aa-0.66□□□□□ -2.52
SNORA40.3-201ENST00000390964 GPR98Q8WXG9 6306 aa-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 HMCN2Q8NDA2 5059 aa-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 ABCA2Q9BZC7 2435 aa-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 ADGBQ8N7X0 1667 aa-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 A0A1W2PRS3 328 aa-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 FABP4P15090 132 aa-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 PHBP35232 272 aa-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 MRPS36P82909 103 aaKnown RBP-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 AKR1C8PQ5T2L2 129 aa-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 PHB2Q99623 299 aa-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 SH3BGRL3Q9H299 93 aa-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 LYRM2Q9NU23 88 aaPredicted RBP-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 SSR3Q9UNL2 185 aa-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 AFDNP55196 1824 aaKnown RBP-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 F8P00451 2351 aa-0.67□□□□□ -2.52
SNORA40.3-201ENST00000390964 ESPL1Q14674 2120 aa-0.68□□□□□ -2.52
SNORA40.3-201ENST00000390964 A0A096LNT2 108 aa-0.68□□□□□ -2.52
SNORA40.3-201ENST00000390964 CSAG1Q6PB30 78 aa-0.68□□□□□ -2.52
SNORA40.3-201ENST00000390964 NUP35Q8NFH5 326 aa-0.68□□□□□ -2.52
SNORA40.3-201ENST00000390964 USP54Q70EL1 1684 aa-0.69□□□□□ -2.52
SNORA40.3-201ENST00000390964 FXYD1O00168 92 aa-0.69□□□□□ -2.52
SNORA40.3-201ENST00000390964 ATG12O94817 140 aa-0.69□□□□□ -2.52
SNORA40.3-201ENST00000390964 MT-ND6P03923 174 aa-0.69□□□□□ -2.52
SNORA40.3-201ENST00000390964 SNCBQ16143 134 aa-0.69□□□□□ -2.52
SNORA40.3-201ENST00000390964 KRTAP6-1Q3LI64 71 aa-0.69□□□□□ -2.52
SNORA40.3-201ENST00000390964 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.69□□□□□ -2.52
SNORA40.3-201ENST00000390964 OR5AK2Q8NH90 309 aa-0.69□□□□□ -2.52
SNORA40.3-201ENST00000390964 CACNA1AO00555 2505 aa-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 C3orf85A0A1B0GTC6 90 aa-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 LOC101927531A0A1B0GV80 90 aa-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 A0A1W2PPB8 328 aa-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 HIGD1CA8MV81 97 aa-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 KIR3DP1A8MWS1 328 aa-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 IGF2P01344 180 aa-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 TRACP01848 142 aa-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 C3orf62Q6ZUJ4 267 aa-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 TCTEX1D1Q8N7M0 179 aa-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 FAM213BQ8TBF2 198 aa-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 NEK7Q8TDX7 302 aa-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 CIB3Q96Q77 187 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 PBDC1Q9BVG4 233 aa-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 SYNE2Q8WXH0 6885 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.3-201ENST00000390964 MAP2P11137 1827 aaKnown RBP-0.71□□□□□ -2.52
SNORA40.3-201ENST00000390964 BBIP1A8MTZ0 92 aa-0.71□□□□□ -2.52
SNORA40.3-201ENST00000390964 IFNA6P05013 189 aa-0.71□□□□□ -2.52
SNORA40.3-201ENST00000390964 REEP5Q00765 189 aa-0.71□□□□□ -2.52
SNORA40.3-201ENST00000390964 POU6F1Q14863 301 aa-0.71□□□□□ -2.52
SNORA40.3-201ENST00000390964 Q5XG85 94 aa-0.71□□□□□ -2.52
SNORA40.3-201ENST00000390964 OR4B1Q8NGF8 309 aa-0.71□□□□□ -2.52
SNORA40.3-201ENST00000390964 DIRC1Q969H9 104 aa-0.71□□□□□ -2.52
SNORA40.3-201ENST00000390964 KPNA4O00629 521 aaPredicted RBP-0.72□□□□□ -2.52
SNORA40.3-201ENST00000390964 PPP1R2P41236 205 aa-0.72□□□□□ -2.52
SNORA40.3-201ENST00000390964 NDUFA6P56556 154 aa-0.72□□□□□ -2.52
SNORA40.3-201ENST00000390964 KLKP1Q107X0 134 aa-0.72□□□□□ -2.52
SNORA40.3-201ENST00000390964 RTL8BQ17RB0 113 aa-0.72□□□□□ -2.52
SNORA40.3-201ENST00000390964 TMEM229BQ8NBD8 167 aa-0.72□□□□□ -2.52
SNORA40.3-201ENST00000390964 ISOC1Q96CN7 298 aa-0.72□□□□□ -2.52
SNORA40.3-201ENST00000390964 DGCR14Q96DF8 476 aaKnown RBP-0.72□□□□□ -2.52
SNORA40.3-201ENST00000390964 TAF9BQ9HBM6 251 aa-0.72□□□□□ -2.52
SNORA40.3-201ENST00000390964 TMEM14BQ9NUH8 114 aa-0.72□□□□□ -2.52
SNORA40.3-201ENST00000390964 MYH2Q9UKX2 1941 aa-0.72□□□□□ -2.53
SNORA40.3-201ENST00000390964 AHCTF1Q8WYP5 2266 aa-0.72□□□□□ -2.53
SNORA40.3-201ENST00000390964 ARL5CA6NH57 179 aa-0.73□□□□□ -2.53
SNORA40.3-201ENST00000390964 FADDQ13158 208 aa-0.73□□□□□ -2.53
SNORA40.3-201ENST00000390964 DHRS4L2Q6PKH6 230 aa-0.73□□□□□ -2.53
SNORA40.3-201ENST00000390964 MRPL36Q9P0J6 103 aaKnown RBP-0.73□□□□□ -2.53
SNORA40.3-201ENST00000390964 FSIP2Q5CZC0 6907 aa-0.73□□□□□ -2.53
SNORA40.3-201ENST00000390964 NINQ8N4C6 2090 aa-0.74□□□□□ -2.53
SNORA40.3-201ENST00000390964 C5orf58C9J3I9 102 aa-0.74□□□□□ -2.53
SNORA40.3-201ENST00000390964 H3BQV1 296 aa-0.74□□□□□ -2.53
SNORA40.3-201ENST00000390964 CSN2P05814 226 aa-0.74□□□□□ -2.53
SNORA40.3-201ENST00000390964 ETV6P41212 452 aa-0.74□□□□□ -2.53
SNORA40.3-201ENST00000390964 DNAJB13P59910 316 aa-0.74□□□□□ -2.53
SNORA40.3-201ENST00000390964 TMED2Q15363 201 aa-0.74□□□□□ -2.53
SNORA40.3-201ENST00000390964 CCSMST1Q4G0I0 132 aa-0.74□□□□□ -2.53
SNORA40.3-201ENST00000390964 IL20Q9NYY1 176 aa-0.74□□□□□ -2.53
SNORA40.3-201ENST00000390964 TRAPPC8Q9Y2L5 1435 aa-0.74□□□□□ -2.53
SNORA40.3-201ENST00000390964 UNC13BO14795 1591 aa-0.74□□□□□ -2.53
SNORA40.3-201ENST00000390964 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.75□□□□□ -2.53
SNORA40.3-201ENST00000390964 ANKRD31Q8N7Z5 1873 aa-0.75□□□□□ -2.53
SNORA40.3-201ENST00000390964 HSD11B1P28845 292 aa-0.75□□□□□ -2.53
SNORA40.3-201ENST00000390964 CROCCP2Q86T23 111 aa-0.75□□□□□ -2.53
SNORA40.3-201ENST00000390964 CLEC2BQ92478 149 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms