RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 XCL2Q9UBD3 114 aa4□□□□□ -1.77
LTN1-202ENST00000389194 MSRB2Q9Y3D2 182 aa4□□□□□ -1.77
LTN1-202ENST00000389194 FAM215AQ9Y5M1 114 aa4□□□□□ -1.77
LTN1-202ENST00000389194 KIAA1549LQ6ZVL6 1849 aa4□□□□□ -1.77
LTN1-202ENST00000389194 ADARB2-AS1A8MUL3 147 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 C15orf65H3BRN8 121 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 SAMD13Q5VXD3 122 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 TRBV6-6A0A0A6YYG2 114 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 DEFB130BP0DP73 79 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 DEFB130AP0DP74 79 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 PET117Q6UWS5 81 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 PKD1L2Q7Z442 2459 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 TANC1Q9C0D5 1861 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 TRAV9-1A0A075B6T8 112 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 A0A096LPF7 62 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 A0A1B0GW64 132 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 TDGF1P3P51864 188 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 CKS1BP61024 79 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 SLC50A1Q9BRV3 221 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 LRRK2Q5S007 2527 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 IGLL1P15814 213 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 LOXP28300 417 aaPredicted RBP3.99□□□□□ -1.77
LTN1-202ENST00000389194 Q6AWC8 147 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 LINC00173Q6ZV60 143 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 KLHL30-AS1Q8NEE0 82 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 NXT2Q9NPJ8 142 aaKnown RBP3.99□□□□□ -1.77
LTN1-202ENST00000389194 NDUFA4L2Q9NRX3 87 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 V9GYV3 84 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 IGHV2-70P01814 119 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 IGHG3P01860 377 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 LINC00158P58513 81 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 ERVK11-1P61568 191 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 HIST2H2BDQ6DRA6 164 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 CHCHD1Q96BP2 118 aaKnown RBP3.99□□□□□ -1.77
LTN1-202ENST00000389194 PRSS22Q9GZN4 317 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 DSCAMO60469 2012 aa3.99□□□□□ -1.77
LTN1-202ENST00000389194 GAGE12BA1L429 117 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 DEFB131AP59861 70 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 C10orf126Q8N4M7 172 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 FREM2Q5SZK8 3169 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 TNRC6AQ8NDV7 1962 aaKnown RBP3.98□□□□□ -1.77
LTN1-202ENST00000389194 TNFRSF6BO95407 300 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 C11orf53Q8IXP5 236 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 A0A1W2PNU3 283 aaPredicted RBP3.98□□□□□ -1.77
LTN1-202ENST00000389194 FAM90A9PA6NNJ1 464 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 H7C1H1 209 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 IGHV2-5P01817 119 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 DEFB136Q30KP8 78 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 AMTNQ6UX39 209 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 CTSZQ9UBR2 303 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 IGHV1-24A0A0C4DH33 117 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 FAM231BA6NCW3 169 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 PRB1P04280 392 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 MALP21145 153 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 E7EUB6 86 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 TOMM40O96008 361 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 GAGE13Q4V321 117 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 GATD1Q8NB37 220 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 PRSS33Q8NF86 280 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 PGPEP1Q9NXJ5 209 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 RS1O15537 224 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 IL15RAQ13261 267 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 DKK2Q9UBU2 259 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 ANAPC10Q9UM13 185 aa3.98□□□□□ -1.77
LTN1-202ENST00000389194 C22orf46C9J442 243 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 LMO1P25800 156 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 OCIAD2Q56VL3 154 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 Q6ZS49 121 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 TTTY13Q9BZ97 58 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 MRPL51Q4U2R6 128 aaKnown RBP3.97□□□□□ -1.77
LTN1-202ENST00000389194 CLPSL2Q6UWE3 100 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 SRSF8Q9BRL6 282 aaKnown RBP3.97□□□□□ -1.77
LTN1-202ENST00000389194 SHANK2-AS3Q9BTD1 123 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 CELSR3Q9NYQ7 3312 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 TP73-AS1Q9UF72 201 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 TRAV8-3A0A0A6YYJ7 113 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 VWC2LB2RUY7 222 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 NPYP01303 97 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 PAX1P15863 534 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 HSD52Q0P140 79 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 FOXE3Q13461 319 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 MSRB1Q9NZV6 116 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 PAPPA-AS1Q5QFB9 102 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 ETV2O00321 342 aaPredicted RBP3.97□□□□□ -1.77
LTN1-202ENST00000389194 ORMDL2Q53FV1 153 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 WIPF2Q8TF74 440 aaPredicted RBP3.97□□□□□ -1.77
LTN1-202ENST00000389194 CHAC1Q9BUX1 264 aa3.97□□□□□ -1.77
LTN1-202ENST00000389194 A0A1B0GW15 77 aa3.96□□□□□ -1.77
LTN1-202ENST00000389194 GNRH2O43555 120 aa3.96□□□□□ -1.77
LTN1-202ENST00000389194 IGLV3-1P01715 115 aa3.96□□□□□ -1.77
LTN1-202ENST00000389194 SLC25A16P16260 332 aa3.96□□□□□ -1.77
LTN1-202ENST00000389194 UBE2V1Q13404 147 aa3.96□□□□□ -1.77
LTN1-202ENST00000389194 FXYD5Q96DB9 178 aa3.96□□□□□ -1.77
LTN1-202ENST00000389194 MS4A6AQ9H2W1 248 aa3.96□□□□□ -1.77
LTN1-202ENST00000389194 TP53TG1Q9Y2A0 90 aa3.96□□□□□ -1.77
LTN1-202ENST00000389194 TMEM131Q92545 1883 aa3.96□□□□□ -1.77
LTN1-202ENST00000389194 PRRC2AP48634 2157 aaKnown RBP3.96□□□□□ -1.77
LTN1-202ENST00000389194 PAX4O43316 350 aa3.96□□□□□ -1.78
LTN1-202ENST00000389194 CFPP27918 469 aa3.96□□□□□ -1.78
LTN1-202ENST00000389194 SLX1AQ9BQ83 275 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms