RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 AP5S1Q9NUS5 200 aa11.56□□□□□ -0.56
SCFD2-201ENST00000388940 IGHV3-35A0A0C4DH35 117 aa11.55□□□□□ -0.56
SCFD2-201ENST00000388940 IGLC6P0CF74 106 aa11.55□□□□□ -0.56
SCFD2-201ENST00000388940 TSPOP30536 169 aa11.55□□□□□ -0.56
SCFD2-201ENST00000388940 ZNF80P51504 273 aaPredicted RBP11.55□□□□□ -0.56
SCFD2-201ENST00000388940 CLEC19AQ6UXS0 136 aa11.55□□□□□ -0.56
SCFD2-201ENST00000388940 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.55□□□□□ -0.56
SCFD2-201ENST00000388940 TMEM191AQ9H0A3 160 aa11.55□□□□□ -0.56
SCFD2-201ENST00000388940 C19orf54Q5BKX5 351 aa11.55□□□□□ -0.56
SCFD2-201ENST00000388940 IGFL4Q6B9Z1 124 aa11.55□□□□□ -0.56
SCFD2-201ENST00000388940 ZNF575Q86XF7 245 aa11.55□□□□□ -0.56
SCFD2-201ENST00000388940 Q8TAT8 98 aa11.55□□□□□ -0.56
SCFD2-201ENST00000388940 PSMG3-AS1Q96PY0 264 aa11.55□□□□□ -0.56
SCFD2-201ENST00000388940 ST20Q9HBF5 79 aa11.55□□□□□ -0.56
SCFD2-201ENST00000388940 MOB4Q9Y3A3 225 aa11.55□□□□□ -0.56
SCFD2-201ENST00000388940 MED13LQ71F56 2210 aa11.54□□□□□ -0.56
SCFD2-201ENST00000388940 IGHV3OR16-8A0A075B7F1 116 aa11.54□□□□□ -0.56
SCFD2-201ENST00000388940 TMSB15BA0A087X1C1 80 aa11.54□□□□□ -0.56
SCFD2-201ENST00000388940 TMEM213A2RRL7 107 aa11.54□□□□□ -0.56
SCFD2-201ENST00000388940 CSN3P07498 182 aa11.54□□□□□ -0.56
SCFD2-201ENST00000388940 OCIAD2Q56VL3 154 aa11.54□□□□□ -0.56
SCFD2-201ENST00000388940 FER1L6-AS1Q8NA97 138 aa11.54□□□□□ -0.56
SCFD2-201ENST00000388940 PRSS3P2Q8NHM4 247 aa11.54□□□□□ -0.56
SCFD2-201ENST00000388940 U3KQE9 123 aa11.54□□□□□ -0.56
SCFD2-201ENST00000388940 FABP5P3A8MUU1 101 aa11.54□□□□□ -0.56
SCFD2-201ENST00000388940 FA2HQ7L5A8 372 aa11.54□□□□□ -0.56
SCFD2-201ENST00000388940 MRPL53Q96EL3 112 aaKnown RBP11.54□□□□□ -0.56
SCFD2-201ENST00000388940 IGHV1-69DA0A0B4J2H0 117 aa11.53□□□□□ -0.56
SCFD2-201ENST00000388940 IGHV1-69P01742 117 aa11.53□□□□□ -0.56
SCFD2-201ENST00000388940 ATP5G2Q06055 141 aa11.53□□□□□ -0.56
SCFD2-201ENST00000388940 ORMDL3Q8N138 153 aa11.53□□□□□ -0.56
SCFD2-201ENST00000388940 METTL26Q96S19 204 aa11.53□□□□□ -0.56
SCFD2-201ENST00000388940 CNFNQ9BYD5 112 aa11.53□□□□□ -0.56
SCFD2-201ENST00000388940 MEGF9Q9H1U4 602 aa11.53□□□□□ -0.56
SCFD2-201ENST00000388940 FAM223BA6NKX1 122 aa11.52□□□□□ -0.56
SCFD2-201ENST00000388940 D6R8Y8 96 aa11.52□□□□□ -0.56
SCFD2-201ENST00000388940 FAM223AQ8IWN6 122 aa11.52□□□□□ -0.56
SCFD2-201ENST00000388940 OR10AG1Q8NH19 301 aa11.52□□□□□ -0.56
SCFD2-201ENST00000388940 PIFOQ8TCI5 191 aa11.52□□□□□ -0.56
SCFD2-201ENST00000388940 PRELID3AQ96N28 172 aa11.52□□□□□ -0.56
SCFD2-201ENST00000388940 CST9LQ9H4G1 147 aa11.52□□□□□ -0.56
SCFD2-201ENST00000388940 TRAV41A0A0B4J266 112 aa11.52□□□□□ -0.57
SCFD2-201ENST00000388940 PRAC2D3DTV9 90 aa11.52□□□□□ -0.57
SCFD2-201ENST00000388940 LINC01559Q495D7 138 aa11.52□□□□□ -0.57
SCFD2-201ENST00000388940 MRPL51Q4U2R6 128 aaKnown RBP11.52□□□□□ -0.57
SCFD2-201ENST00000388940 LINC01545Q5VT33 79 aa11.52□□□□□ -0.57
SCFD2-201ENST00000388940 AMN1Q8IY45 258 aa11.52□□□□□ -0.57
SCFD2-201ENST00000388940 PIMREGQ9BSJ6 248 aa11.52□□□□□ -0.57
SCFD2-201ENST00000388940 ZNF747Q9BV97 191 aa11.52□□□□□ -0.57
SCFD2-201ENST00000388940 HIF1ANQ9NWT6 349 aa11.52□□□□□ -0.57
SCFD2-201ENST00000388940 ERCC8Q13216 396 aa11.51□□□□□ -0.57
SCFD2-201ENST00000388940 K7ERU9 68 aa11.51□□□□□ -0.57
SCFD2-201ENST00000388940 IFI27P40305 119 aaPredicted RBP11.51□□□□□ -0.57
SCFD2-201ENST00000388940 SIGLEC8Q9NYZ4 499 aa11.51□□□□□ -0.57
SCFD2-201ENST00000388940 TRAV8-2A0A0B4J237 113 aa11.5□□□□□ -0.57
SCFD2-201ENST00000388940 BRI3O95415 125 aa11.5□□□□□ -0.57
SCFD2-201ENST00000388940 C10orf105Q8TEF2 133 aa11.5□□□□□ -0.57
SCFD2-201ENST00000388940 MS4A6AQ9H2W1 248 aa11.5□□□□□ -0.57
SCFD2-201ENST00000388940 ORM1P02763 201 aa11.5□□□□□ -0.57
SCFD2-201ENST00000388940 TWIST1Q15672 202 aa11.5□□□□□ -0.57
SCFD2-201ENST00000388940 TMEM219Q86XT9 240 aa11.5□□□□□ -0.57
SCFD2-201ENST00000388940 RNF182Q8N6D2 247 aa11.5□□□□□ -0.57
SCFD2-201ENST00000388940 IGHV4-61A0A0C4DH41 118 aa11.49□□□□□ -0.57
SCFD2-201ENST00000388940 HIST1H1AQ02539 215 aaPredicted RBP11.49□□□□□ -0.57
SCFD2-201ENST00000388940 A0A096LNJ9 63 aa11.48□□□□□ -0.57
SCFD2-201ENST00000388940 IGF1P05019 195 aa11.48□□□□□ -0.57
SCFD2-201ENST00000388940 C8orf86Q6ZUL3 223 aa11.48□□□□□ -0.57
SCFD2-201ENST00000388940 AGPAT4-IT1Q9H0P7 198 aa11.48□□□□□ -0.57
SCFD2-201ENST00000388940 ABCA2Q9BZC7 2435 aa11.48□□□□□ -0.57
SCFD2-201ENST00000388940 IGHV3-66A0A0C4DH42 116 aa11.48□□□□□ -0.57
SCFD2-201ENST00000388940 hDV102S1A0JD36 115 aa11.48□□□□□ -0.57
SCFD2-201ENST00000388940 C9orf47Q6ZRZ4 202 aa11.48□□□□□ -0.57
SCFD2-201ENST00000388940 IL17RELQ6ZVW7 336 aa11.48□□□□□ -0.57
SCFD2-201ENST00000388940 NPFFR1Q9GZQ6 430 aa11.48□□□□□ -0.57
SCFD2-201ENST00000388940 H3BUA1 57 aa11.47□□□□□ -0.57
SCFD2-201ENST00000388940 CKS2P33552 79 aa11.47□□□□□ -0.57
SCFD2-201ENST00000388940 FAM106AQ4KMX7 169 aa11.47□□□□□ -0.57
SCFD2-201ENST00000388940 CCL19Q99731 98 aa11.47□□□□□ -0.57
SCFD2-201ENST00000388940 NCOR2Q9Y618 2525 aa11.47□□□□□ -0.57
SCFD2-201ENST00000388940 IGHV3OR16-10A0A075B7F0 116 aa11.47□□□□□ -0.57
SCFD2-201ENST00000388940 TRAV40A0A0B4J280 105 aa11.47□□□□□ -0.57
SCFD2-201ENST00000388940 MUC21A0A0G2JKD1 596 aa11.47□□□□□ -0.57
SCFD2-201ENST00000388940 MUC21A0A140T8X8 626 aa11.47□□□□□ -0.57
SCFD2-201ENST00000388940 TRGV3P03979 118 aa11.47□□□□□ -0.57
SCFD2-201ENST00000388940 MUC21Q5SSG8 566 aa11.47□□□□□ -0.57
SCFD2-201ENST00000388940 RNF185Q96GF1 192 aa11.47□□□□□ -0.57
SCFD2-201ENST00000388940 SCRT2Q9NQ03 307 aa11.47□□□□□ -0.57
SCFD2-201ENST00000388940 CHD8Q9HCK8 2581 aa11.47□□□□□ -0.57
SCFD2-201ENST00000388940 LOC389332A0A1B0GUA5 103 aa11.46□□□□□ -0.57
SCFD2-201ENST00000388940 LINC01546A6NGU7 62 aa11.46□□□□□ -0.57
SCFD2-201ENST00000388940 LOXL1Q08397 574 aaPredicted RBP11.46□□□□□ -0.57
SCFD2-201ENST00000388940 TMEM78Q5T7P6 136 aa11.46□□□□□ -0.57
SCFD2-201ENST00000388940 BRD3OSQ6XYD6 125 aa11.46□□□□□ -0.57
SCFD2-201ENST00000388940 GLMPQ8WWB7 406 aa11.46□□□□□ -0.57
SCFD2-201ENST00000388940 IGHV3OR16-13A0A075B7E8 117 aa11.45□□□□□ -0.58
SCFD2-201ENST00000388940 IGHV3-74A0A0B4J1X5 117 aa11.45□□□□□ -0.58
SCFD2-201ENST00000388940 ZNF207O43670 478 aaKnown RBP11.45□□□□□ -0.58
SCFD2-201ENST00000388940 NPYP01303 97 aa11.45□□□□□ -0.58
SCFD2-201ENST00000388940 ARL3P36405 182 aa11.45□□□□□ -0.58
SCFD2-201ENST00000388940 SLC25A34Q6PIV7 304 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms