RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 RAB37Q96AX2 223 aa0.26□□□□□ -2.37
RNU6-39P-201ENST00000384344 WFDC10AQ9H1F0 79 aa0.26□□□□□ -2.37
RNU6-39P-201ENST00000384344 JPT1Q9UK76 154 aa0.26□□□□□ -2.37
RNU6-39P-201ENST00000384344 PLB1Q6P1J6 1458 aa0.26□□□□□ -2.37
RNU6-39P-201ENST00000384344 PLXND1Q9Y4D7 1925 aa0.26□□□□□ -2.37
RNU6-39P-201ENST00000384344 ASXL3Q9C0F0 2248 aa0.26□□□□□ -2.37
RNU6-39P-201ENST00000384344 DNAH1Q9P2D7 4330 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 MUC4Q99102 2169 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 CUX1P39880 1505 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 HSPG2P98160 4391 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 TMEM114B3SHH9 223 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 JMJD7-PLA2G4BH0Y9G9 81 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 HLA-EP13747 358 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 ATP5G3P48201 142 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 CCL7P80098 99 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 AKIRIN2Q53H80 203 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 OR5AS1Q8N127 324 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 TSKUQ8WUA8 353 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 NPCDR1Q9BY65 106 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 UCK1Q9HA47 277 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 FAM32AQ9Y421 112 aaKnown RBP0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 CASP8AP2Q9UKL3 1982 aa0.25□□□□□ -2.37
RNU6-39P-201ENST00000384344 CHD1O14646 1710 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 CC2D2AQ9P2K1 1620 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 ALKQ9UM73 1620 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 BIVM-ERCC5R4GMW8 1640 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 NRKQ7Z2Y5 1582 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 MIA2Q96PC5 1412 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 ACACAQ13085 2346 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 TRAV23DV6A0A075B6W5 121 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 A0A087WSZ3 146 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 K7EIL1 84 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 PPYP01298 95 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 SPRR2EP22531 72 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 SPRR2DP22532 72 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 SPRR2BP35325 72 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 SPRR2AP35326 72 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 SERPINB9P50453 376 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 RAB5CP51148 216 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 FOXA3P55318 350 aaPredicted RBP0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 VBP1P61758 197 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 GOLT1AQ6ZVE7 132 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 IFT20Q8IY31 132 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 OR5D16Q8NGK9 328 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 OR10X1Q8NGY0 326 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 GGACTQ9BVM4 153 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 ENY2Q9NPA8 101 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 ALPK3Q96L96 1907 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 LRP6O75581 1613 aa0.24□□□□□ -2.37
RNU6-39P-201ENST00000384344 FRAS1Q86XX4 4008 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 MAPKBP1O60336 1514 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 CCDC144AA2RUR9 1427 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 MYH10P35580 1976 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 TRAV27A0A087WT01 109 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 TRBV30A0A0K0K1B3 111 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 HMGB3O15347 200 aaKnown RBP0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 DYNLT3P51808 116 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 ZNF137PP52743 207 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 C1orf134Q5TEV5 83 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 OR4K15Q8NH41 348 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 Q8TAT8 98 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 CCDC94Q9BW85 323 aaPredicted RBP0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 OPTCQ9UBM4 332 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 ARL2BPQ9Y2Y0 163 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 ARL5AQ9Y689 179 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 CFAP43Q8NDM7 1665 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 TMEM131LA2VDJ0 1609 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 SCN10AQ9Y5Y9 1956 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 KIAA0586Q9BVV6 1533 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 FAM135AQ9P2D6 1515 aa0.23□□□□□ -2.37
RNU6-39P-201ENST00000384344 AHCTF1Q8WYP5 2266 aa0.22□□□□□ -2.37
RNU6-39P-201ENST00000384344 DYNC2H1Q8NCM8 4307 aaKnown RBP0.22□□□□□ -2.37
RNU6-39P-201ENST00000384344 TMEM256-PLSCR3K7ERE1 68 aa0.22□□□□□ -2.37
RNU6-39P-201ENST00000384344 SPINT3P49223 89 aa0.22□□□□□ -2.37
RNU6-39P-201ENST00000384344 C6orf52Q5T4I8 152 aa0.22□□□□□ -2.37
RNU6-39P-201ENST00000384344 ARPINQ7Z6K5 226 aa0.22□□□□□ -2.37
RNU6-39P-201ENST00000384344 S100A7AQ86SG5 101 aa0.22□□□□□ -2.37
RNU6-39P-201ENST00000384344 ZC2HC1AQ96GY0 325 aa0.22□□□□□ -2.37
RNU6-39P-201ENST00000384344 ZNF714Q96N38 554 aa0.22□□□□□ -2.37
RNU6-39P-201ENST00000384344 LINC00846Q9NV44 126 aa0.22□□□□□ -2.37
RNU6-39P-201ENST00000384344 FRMPD1Q5SYB0 1578 aa0.22□□□□□ -2.37
RNU6-39P-201ENST00000384344 OBSL1O75147 1896 aa0.22□□□□□ -2.37
RNU6-39P-201ENST00000384344 ABCC10Q5T3U5 1492 aa0.22□□□□□ -2.37
RNU6-39P-201ENST00000384344 CSMD3Q7Z407 3707 aa0.22□□□□□ -2.37
RNU6-39P-201ENST00000384344 MAP3K4Q9Y6R4 1608 aa0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 SACSQ9NZJ4 4579 aa0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 THOC2Q8NI27 1593 aaKnown RBP0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 CEP170BQ9Y4F5 1589 aaPredicted RBP0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 PRKDCP78527 4128 aaKnown RBP0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 LCE6AA0A183 80 aa0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 NUPR2A6NF83 97 aa0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 C5orf67F2Z3F1 127 aa0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 SERPINA1P01009 418 aa0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 TAF1AQ15573 450 aaPredicted RBP0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 POP5Q969H6 163 aaKnown RBP0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 CHCHD1Q96BP2 118 aaKnown RBP0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 HEATR1Q9H583 2144 aaKnown RBP0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 POPDC3Q9HBV1 291 aa0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 BOKQ9UMX3 212 aaPredicted RBP0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 MYO18AQ92614 2054 aaKnown RBP0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms