RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 ORMDL3Q8N138 153 aa9.41□□□□□ -0.9
RFC3-201ENST00000380071 FAM110DQ8TAY7 271 aaPredicted RBP9.41□□□□□ -0.9
RFC3-201ENST00000380071 BUB3O43684 328 aa9.4□□□□□ -0.9
RFC3-201ENST00000380071 UBE2E1P51965 193 aa9.4□□□□□ -0.9
RFC3-201ENST00000380071 FER1L6-AS1Q8NA97 138 aa9.4□□□□□ -0.9
RFC3-201ENST00000380071 OR8A1Q8NGG7 326 aa9.4□□□□□ -0.9
RFC3-201ENST00000380071 ZFAND3Q9H8U3 227 aa9.4□□□□□ -0.9
RFC3-201ENST00000380071 HIVEP3Q5T1R4 2406 aa9.4□□□□□ -0.91
RFC3-201ENST00000380071 TAX1BP3O14907 124 aa9.4□□□□□ -0.91
RFC3-201ENST00000380071 ORM1P02763 201 aa9.4□□□□□ -0.91
RFC3-201ENST00000380071 BMI1P35226 326 aa9.4□□□□□ -0.91
RFC3-201ENST00000380071 CLEC19AQ6UXS0 136 aa9.4□□□□□ -0.91
RFC3-201ENST00000380071 PIP4P2Q8N4L2 257 aa9.4□□□□□ -0.91
RFC3-201ENST00000380071 PSMG3-AS1Q96PY0 264 aa9.4□□□□□ -0.91
RFC3-201ENST00000380071 IGHV3-49A0A0A0MS15 119 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 CLPSL1A2RUU4 121 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 SNAI2O43623 268 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 SCGB2A1O75556 95 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 IGLC6P0CF74 106 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 RBX1P62877 108 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 ARL6IP6Q8N6S5 226 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 BPESC1Q9GZL8 116 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 CELSR1Q9NYQ6 3014 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 A0A087X0K7 114 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 GAS8-AS1O95177 125 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 NPYP01303 97 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 PPIFP30405 207 aaKnown RBP9.39□□□□□ -0.91
RFC3-201ENST00000380071 CKS2P33552 79 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 LY6DQ14210 128 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 CCDC140Q96MF4 163 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 MS4A6AQ9H2W1 248 aa9.39□□□□□ -0.91
RFC3-201ENST00000380071 ZNF207O43670 478 aaKnown RBP9.38□□□□□ -0.91
RFC3-201ENST00000380071 LMO4P61968 165 aa9.38□□□□□ -0.91
RFC3-201ENST00000380071 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.38□□□□□ -0.91
RFC3-201ENST00000380071 FABP5P3A8MUU1 101 aa9.37□□□□□ -0.91
RFC3-201ENST00000380071 PCP4P48539 62 aa9.37□□□□□ -0.91
RFC3-201ENST00000380071 RPS20P60866 119 aaKnown RBP9.37□□□□□ -0.91
RFC3-201ENST00000380071 PAX8Q06710 450 aa9.37□□□□□ -0.91
RFC3-201ENST00000380071 IL17RELQ6ZVW7 336 aa9.37□□□□□ -0.91
RFC3-201ENST00000380071 DEFB125Q8N687 156 aa9.37□□□□□ -0.91
RFC3-201ENST00000380071 CENPVL3A0A0U1RRI6 287 aa9.37□□□□□ -0.91
RFC3-201ENST00000380071 FBLL1A6NHQ2 334 aaKnown RBP9.37□□□□□ -0.91
RFC3-201ENST00000380071 GOSR1O95249 250 aa9.37□□□□□ -0.91
RFC3-201ENST00000380071 EFNA4P52798 201 aa9.37□□□□□ -0.91
RFC3-201ENST00000380071 VAMP3Q15836 100 aa9.37□□□□□ -0.91
RFC3-201ENST00000380071 OR4C5Q8NGB2 326 aa9.37□□□□□ -0.91
RFC3-201ENST00000380071 RNF185Q96GF1 192 aa9.37□□□□□ -0.91
RFC3-201ENST00000380071 K7EP13 123 aa9.36□□□□□ -0.91
RFC3-201ENST00000380071 TCTAP57738 103 aa9.36□□□□□ -0.91
RFC3-201ENST00000380071 PRSS57Q6UWY2 283 aa9.36□□□□□ -0.91
RFC3-201ENST00000380071 C2orf91Q6ZV80 131 aa9.36□□□□□ -0.91
RFC3-201ENST00000380071 WFDC3Q8IUB2 231 aa9.36□□□□□ -0.91
RFC3-201ENST00000380071 IGHV3OR16-10A0A075B7F0 116 aa9.36□□□□□ -0.91
RFC3-201ENST00000380071 COX8AP10176 69 aa9.36□□□□□ -0.91
RFC3-201ENST00000380071 TMEM219Q86XT9 240 aa9.36□□□□□ -0.91
RFC3-201ENST00000380071 COL25A1Q9BXS0 654 aaPredicted RBP9.36□□□□□ -0.91
RFC3-201ENST00000380071 LINC00527Q9UJ94 153 aa9.36□□□□□ -0.91
RFC3-201ENST00000380071 SPTBN4Q9H254 2564 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 C19orf84I3L1E1 186 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 NPFFO15130 113 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 CACNG7P62955 275 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 KLK9Q2XQG4 91 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 ANKRD39Q53RE8 183 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 C12orf54Q6X4T0 127 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 AGPAT4-IT1Q9H0P7 198 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 KLK9Q9UKQ9 250 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 TRAV8-2A0A0B4J237 113 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 IGKV3D-20A0A0C4DH25 116 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 CBY3A6NI87 242 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 HBDP02042 147 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 HIST1H1AQ02539 215 aaPredicted RBP9.35□□□□□ -0.91
RFC3-201ENST00000380071 Q6ZQT7 251 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 C11orf21Q9P2W6 132 aa9.35□□□□□ -0.91
RFC3-201ENST00000380071 S100A7P31151 101 aa9.34□□□□□ -0.91
RFC3-201ENST00000380071 SRSF2Q01130 221 aaKnown RBP9.34□□□□□ -0.91
RFC3-201ENST00000380071 NHLH1Q02575 133 aa9.34□□□□□ -0.91
RFC3-201ENST00000380071 C5orf56Q8N8D9 126 aa9.34□□□□□ -0.91
RFC3-201ENST00000380071 GATA1P15976 413 aaPredicted RBP9.34□□□□□ -0.91
RFC3-201ENST00000380071 LINC01559Q495D7 138 aa9.34□□□□□ -0.91
RFC3-201ENST00000380071 EEF1AKMT3Q96AZ1 226 aa9.34□□□□□ -0.91
RFC3-201ENST00000380071 CNFNQ9BYD5 112 aa9.34□□□□□ -0.91
RFC3-201ENST00000380071 EVI2AP22794 236 aa9.33□□□□□ -0.92
RFC3-201ENST00000380071 UQCRFS1P47985 274 aa9.33□□□□□ -0.92
RFC3-201ENST00000380071 RAB9AP51151 201 aa9.33□□□□□ -0.92
RFC3-201ENST00000380071 LGALS9BQ3B8N2 356 aa9.33□□□□□ -0.92
RFC3-201ENST00000380071 LGALS9CQ6DKI2 356 aa9.33□□□□□ -0.92
RFC3-201ENST00000380071 IFI27L1Q96BM0 104 aa9.33□□□□□ -0.92
RFC3-201ENST00000380071 RBAKDNA6NC62 111 aa9.33□□□□□ -0.92
RFC3-201ENST00000380071 FGF6P10767 208 aa9.33□□□□□ -0.92
RFC3-201ENST00000380071 AMMECR1LQ6DCA0 310 aa9.33□□□□□ -0.92
RFC3-201ENST00000380071 C18orf15Q96N68 181 aa9.33□□□□□ -0.92
RFC3-201ENST00000380071 SLC50A1Q9BRV3 221 aa9.33□□□□□ -0.92
RFC3-201ENST00000380071 NCOR2Q9Y618 2525 aa9.33□□□□□ -0.92
RFC3-201ENST00000380071 C8orf86Q6ZUL3 223 aa9.32□□□□□ -0.92
RFC3-201ENST00000380071 ITLN2Q8WWU7 325 aaPredicted RBP9.32□□□□□ -0.92
RFC3-201ENST00000380071 METTL26Q96S19 204 aa9.32□□□□□ -0.92
RFC3-201ENST00000380071 CHD8Q9HCK8 2581 aa9.32□□□□□ -0.92
RFC3-201ENST00000380071 TRBV7-1A0A0A6YYK4 115 aa9.32□□□□□ -0.92
RFC3-201ENST00000380071 TRAV8-6A0A0B4J262 113 aa9.32□□□□□ -0.92
RFC3-201ENST00000380071 ATP5G2Q06055 141 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms