RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 TMEM78Q5T7P6 136 aa10.25□□□□□ -0.77
HDAC6-204ENST00000376643 PARD6GQ9BYG4 376 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-204ENST00000376643 SLC25A31Q9H0C2 315 aa10.25□□□□□ -0.77
HDAC6-204ENST00000376643 C11orf1Q9H5F2 150 aa10.25□□□□□ -0.77
HDAC6-204ENST00000376643 GPN1Q9HCN4 374 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-204ENST00000376643 TRBV7-9A0A0J9YWB2 115 aa10.24□□□□□ -0.77
HDAC6-204ENST00000376643 KLLNB2CW77 178 aa10.24□□□□□ -0.77
HDAC6-204ENST00000376643 GPX1P07203 203 aa10.24□□□□□ -0.77
HDAC6-204ENST00000376643 CRISP2P16562 243 aa10.24□□□□□ -0.77
HDAC6-204ENST00000376643 HOXA5P20719 270 aa10.24□□□□□ -0.77
HDAC6-204ENST00000376643 KIR3DS1Q14943 382 aa10.24□□□□□ -0.77
HDAC6-204ENST00000376643 LINC00299Q6ZSB3 139 aa10.24□□□□□ -0.77
HDAC6-204ENST00000376643 ARPC5LQ9BPX5 153 aa10.24□□□□□ -0.77
HDAC6-204ENST00000376643 SEC22CQ9BRL7 303 aa10.24□□□□□ -0.77
HDAC6-204ENST00000376643 NPCDR1Q9BY65 106 aa10.24□□□□□ -0.77
HDAC6-204ENST00000376643 TMPRSS5Q9H3S3 457 aa10.24□□□□□ -0.77
HDAC6-204ENST00000376643 TRGV1A0A0A0MS02 117 aa10.23□□□□□ -0.77
HDAC6-204ENST00000376643 IGSF23A1L1A6 192 aa10.23□□□□□ -0.77
HDAC6-204ENST00000376643 RGS13O14921 159 aa10.23□□□□□ -0.77
HDAC6-204ENST00000376643 TCL1AP56279 114 aa10.23□□□□□ -0.77
HDAC6-204ENST00000376643 RAB32Q13637 225 aa10.23□□□□□ -0.77
HDAC6-204ENST00000376643 C9orf47Q6ZRZ4 202 aa10.23□□□□□ -0.77
HDAC6-204ENST00000376643 Q6ZTI0 123 aa10.23□□□□□ -0.77
HDAC6-204ENST00000376643 MRPL32Q9BYC8 188 aaKnown RBP10.23□□□□□ -0.77
HDAC6-204ENST00000376643 GSN-AS1Q9NRJ2 163 aa10.23□□□□□ -0.77
HDAC6-204ENST00000376643 FUT9Q9Y231 359 aa10.23□□□□□ -0.77
HDAC6-204ENST00000376643 C17orf112F2Z3M2 114 aa10.22□□□□□ -0.77
HDAC6-204ENST00000376643 M0R3E3 92 aa10.22□□□□□ -0.77
HDAC6-204ENST00000376643 EREGO14944 169 aa10.22□□□□□ -0.77
HDAC6-204ENST00000376643 PRB4P10163 310 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-204ENST00000376643 CSN1S1P47710 185 aa10.22□□□□□ -0.77
HDAC6-204ENST00000376643 ESRGQ1W209 222 aa10.22□□□□□ -0.77
HDAC6-204ENST00000376643 BLNKQ8WV28 456 aa10.22□□□□□ -0.77
HDAC6-204ENST00000376643 PTTG2Q9NZH5 202 aa10.22□□□□□ -0.77
HDAC6-204ENST00000376643 ICOSQ9Y6W8 199 aa10.22□□□□□ -0.77
HDAC6-204ENST00000376643 E5RGE8 158 aa10.21□□□□□ -0.77
HDAC6-204ENST00000376643 ZNF324O75467 553 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-204ENST00000376643 RNASE4P34096 147 aaKnown RBP10.21□□□□□ -0.77
HDAC6-204ENST00000376643 CYCSP99999 105 aaKnown RBP10.21□□□□□ -0.77
HDAC6-204ENST00000376643 IL15RAQ13261 267 aa10.21□□□□□ -0.77
HDAC6-204ENST00000376643 SPATA12Q7Z6I5 190 aa10.21□□□□□ -0.77
HDAC6-204ENST00000376643 C11orf72Q8NBR9 251 aa10.21□□□□□ -0.77
HDAC6-204ENST00000376643 S100ZQ8WXG8 99 aa10.21□□□□□ -0.77
HDAC6-204ENST00000376643 ST6GAL2Q96JF0 529 aa10.21□□□□□ -0.77
HDAC6-204ENST00000376643 FAM19A4Q96LR4 140 aa10.21□□□□□ -0.77
HDAC6-204ENST00000376643 PKD1P98161 4303 aa10.21□□□□□ -0.78
HDAC6-204ENST00000376643 DYNC1H1Q14204 4646 aaKnown RBP10.2□□□□□ -0.78
HDAC6-204ENST00000376643 PAX4O43316 350 aa10.2□□□□□ -0.78
HDAC6-204ENST00000376643 SPINK4O60575 86 aa10.2□□□□□ -0.78
HDAC6-204ENST00000376643 NDUFB4O95168 129 aa10.2□□□□□ -0.78
HDAC6-204ENST00000376643 NBEAP1P0C6P0 100 aa10.2□□□□□ -0.78
HDAC6-204ENST00000376643 PYYP10082 97 aa10.2□□□□□ -0.78
HDAC6-204ENST00000376643 ZNF415Q09FC8 603 aa10.2□□□□□ -0.78
HDAC6-204ENST00000376643 ERCC8Q13216 396 aa10.2□□□□□ -0.78
HDAC6-204ENST00000376643 BTN1A1Q13410 526 aa10.2□□□□□ -0.78
HDAC6-204ENST00000376643 ICAM4Q14773 271 aa10.2□□□□□ -0.78
HDAC6-204ENST00000376643 LYPD1Q8N2G4 141 aa10.2□□□□□ -0.78
HDAC6-204ENST00000376643 MAPKAPK5-AS1Q8N8E1 139 aa10.2□□□□□ -0.78
HDAC6-204ENST00000376643 AGPAT4-IT1Q9H0P7 198 aa10.2□□□□□ -0.78
HDAC6-204ENST00000376643 OR51M1Q9H341 326 aa10.2□□□□□ -0.78
HDAC6-204ENST00000376643 PRO0255Q9UI72 69 aa10.2□□□□□ -0.78
HDAC6-204ENST00000376643 IGHV1OR15-1A0A075B7D0 117 aa10.19□□□□□ -0.78
HDAC6-204ENST00000376643 TRAV9-2A0A087WT02 112 aa10.19□□□□□ -0.78
HDAC6-204ENST00000376643 A0A096LPF7 62 aa10.19□□□□□ -0.78
HDAC6-204ENST00000376643 RBAKDNA6NC62 111 aa10.19□□□□□ -0.78
HDAC6-204ENST00000376643 K7EP13 123 aa10.19□□□□□ -0.78
HDAC6-204ENST00000376643 SIVA1O15304 175 aa10.19□□□□□ -0.78
HDAC6-204ENST00000376643 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
HDAC6-204ENST00000376643 EXOC3-AS1Q8N2X6 119 aa10.19□□□□□ -0.78
HDAC6-204ENST00000376643 OR5C1Q8NGR4 320 aa10.19□□□□□ -0.78
HDAC6-204ENST00000376643 ENKURQ8TC29 256 aa10.19□□□□□ -0.78
HDAC6-204ENST00000376643 VGLL1Q99990 258 aa10.19□□□□□ -0.78
HDAC6-204ENST00000376643 PAXXQ9BUH6 204 aa10.19□□□□□ -0.78
HDAC6-204ENST00000376643 NMES1Q9C002 83 aa10.19□□□□□ -0.78
HDAC6-204ENST00000376643 ZNF492Q9P255 531 aa10.19□□□□□ -0.78
HDAC6-204ENST00000376643 PRAF2O60831 178 aa10.18□□□□□ -0.78
HDAC6-204ENST00000376643 PET100P0DJ07 73 aa10.18□□□□□ -0.78
HDAC6-204ENST00000376643 ZNF138P52744 262 aa10.18□□□□□ -0.78
HDAC6-204ENST00000376643 TAS2R45P59539 299 aa10.18□□□□□ -0.78
HDAC6-204ENST00000376643 CD300CQ08708 224 aa10.18□□□□□ -0.78
HDAC6-204ENST00000376643 ASAH1Q13510 395 aa10.18□□□□□ -0.78
HDAC6-204ENST00000376643 MRPL23Q16540 153 aaKnown RBP10.18□□□□□ -0.78
HDAC6-204ENST00000376643 FAM122CQ6P4D5 195 aa10.18□□□□□ -0.78
HDAC6-204ENST00000376643 THAP6Q8TBB0 222 aa10.18□□□□□ -0.78
HDAC6-204ENST00000376643 VSIG2Q96IQ7 327 aa10.18□□□□□ -0.78
HDAC6-204ENST00000376643 SLC25A2Q9BXI2 301 aa10.18□□□□□ -0.78
HDAC6-204ENST00000376643 ZFAND2AQ8N6M9 145 aa10.17□□□□□ -0.78
HDAC6-204ENST00000376643 PCNPQ8WW12 178 aaKnown RBP10.17□□□□□ -0.78
HDAC6-204ENST00000376643 KRTAP1-5Q9BYS1 174 aa10.17□□□□□ -0.78
HDAC6-204ENST00000376643 KLF12Q9Y4X4 402 aa10.17□□□□□ -0.78
HDAC6-204ENST00000376643 LENEPQ9Y5L5 61 aa10.17□□□□□ -0.78
HDAC6-204ENST00000376643 IGKV2-40A0A087WW87 121 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-204ENST00000376643 OR7C2O60412 319 aa10.16□□□□□ -0.78
HDAC6-204ENST00000376643 IGKV2D-40P01614 121 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-204ENST00000376643 LINC00315P59091 139 aa10.16□□□□□ -0.78
HDAC6-204ENST00000376643 ERVFC1-1P60608 527 aa10.16□□□□□ -0.78
HDAC6-204ENST00000376643 NHLH2Q02577 135 aa10.16□□□□□ -0.78
HDAC6-204ENST00000376643 KHDC3LQ587J8 217 aa10.16□□□□□ -0.78
HDAC6-204ENST00000376643 FAM74A1Q5RGS3 127 aa10.16□□□□□ -0.78
HDAC6-204ENST00000376643 CDPF1Q6NVV7 123 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms