RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 A0A0G2JRQ6 117 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 INS-IGF2F8WCM5 200 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 H0Y9J4 135 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 ELK1P19419 428 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 ZIC4Q8N9L1 334 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 SHANK2-AS3Q9BTD1 123 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 MXRA5Q9NR99 2828 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 RTTNQ86VV8 2226 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 CHD8Q9HCK8 2581 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 TLCD2A6NGC4 264 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 LST1O00453 97 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 ZNHIT1O43257 154 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 RIGQ13278 110 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 NUP35Q8NFH5 326 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 LYZL4Q96KX0 146 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 C2orf50Q96LR7 162 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 PARP12Q9H0J9 701 aaKnown RBP6.95□□□□□ -1.3
UBR4-201ENST00000375218 CST11Q9H112 138 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 NDUFC2-KCTD14E9PQ53 114 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 COX7A2LO14548 114 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 COX6A1P12074 109 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 PSMB8P28062 276 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 SLC25A1P53007 311 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 HBBP68871 147 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 Q6ZS49 121 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 NTN5Q8WTR8 489 aaPredicted RBP6.94□□□□□ -1.3
UBR4-201ENST00000375218 MYO7BQ6PIF6 2116 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 CPSF4LA6NMK7 179 aaKnown RBP6.94□□□□□ -1.3
UBR4-201ENST00000375218 CD7P09564 240 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 ZNF883P0CG24 379 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 PMCHL1Q16048 86 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 LPAL2Q16609 132 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 MRPL2Q5T653 305 aaKnown RBP6.94□□□□□ -1.3
UBR4-201ENST00000375218 TM2D3Q9BRN9 247 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 E9PLD3 99 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 COX7A2P2O60397 106 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 NCR2O95944 276 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 TCL1BO95988 128 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 HLA-DQA1P01909 254 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 ZNF688P0C7X2 276 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 MED12LQ86YW9 2145 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 ATP6V0E2Q8NHE4 81 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 RNF114Q9Y508 228 aa6.94□□□□□ -1.3
UBR4-201ENST00000375218 NIPBLQ6KC79 2804 aaeCLIP6.94□□□□□ -1.32e-6■■□□□ 13.4
UBR4-201ENST00000375218 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
UBR4-201ENST00000375218 GNB2P62879 340 aa6.93□□□□□ -1.3
UBR4-201ENST00000375218 FAM103A1Q9BTL3 118 aaKnown RBP6.93□□□□□ -1.3
UBR4-201ENST00000375218 LGALS9BQ3B8N2 356 aa6.93□□□□□ -1.3
UBR4-201ENST00000375218 PPDPFLQ8WWR9 84 aa6.93□□□□□ -1.3
UBR4-201ENST00000375218 FAM218AQ96MZ4 157 aa6.93□□□□□ -1.3
UBR4-201ENST00000375218 IMUPQ9GZP8 106 aa6.93□□□□□ -1.3
UBR4-201ENST00000375218 C12orf77C9JDV5 145 aa6.93□□□□□ -1.3
UBR4-201ENST00000375218 M0R2P5 195 aa6.93□□□□□ -1.3
UBR4-201ENST00000375218 PRB4P10163 310 aaPredicted RBP6.93□□□□□ -1.3
UBR4-201ENST00000375218 TMEM256Q8N2U0 113 aa6.93□□□□□ -1.3
UBR4-201ENST00000375218 IL1F10Q8WWZ1 152 aa6.93□□□□□ -1.3
UBR4-201ENST00000375218 K7EQD1 137 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 CRYGAP11844 174 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 C1orf229Q6ZS94 237 aaPredicted RBP6.92□□□□□ -1.3
UBR4-201ENST00000375218 CENPEQ02224 2701 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 IGHV1-69DA0A0B4J2H0 117 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 LINC00473A8K010 186 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 GYPAP02724 150 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 LINC00205P59089 165 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 REG3GQ6UW15 175 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 NEXN-AS1Q8NBZ9 246 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 ZNF737O75373 536 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 HERVK_113P61574 105 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 LINC01590Q5TEZ4 76 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 RPS4Y2Q8TD47 263 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 TRAV9-2A0A087WT02 112 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 NMSQ5H8A3 153 aa6.92□□□□□ -1.3
UBR4-201ENST00000375218 ZNF407Q9C0G0 2248 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 COX7CP15954 63 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 ASIPP42127 132 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 C6orf223Q8N319 242 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 RNF126Q9BV68 326 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 TRBV24-1A0A075B6N3 115 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 PINLYPA6NC86 204 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 IZUMO1RA6ND01 250 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 M0R378 163 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 ZNF253O75346 499 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 DAZAP2Q15038 168 aaPredicted RBP6.91□□□□□ -1.3
UBR4-201ENST00000375218 AMTNQ6UX39 209 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 TSKUQ8WUA8 353 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 DEFB127Q9H1M4 99 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 CACNA1AO00555 2505 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 IRGMA1A4Y4 181 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 ETV2O00321 342 aaPredicted RBP6.91□□□□□ -1.3
UBR4-201ENST00000375218 IFI6P09912 130 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 ZNF117Q03924 483 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 LGALS9CQ6DKI2 356 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 CLDND2Q8NHS1 167 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 ZNF714Q96N38 554 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 TTTY10Q9BZA0 68 aa6.91□□□□□ -1.3
UBR4-201ENST00000375218 IGHV1-58A0A0C4DH39 117 aa6.9□□□□□ -1.3
UBR4-201ENST00000375218 MFAP2P55001 183 aa6.9□□□□□ -1.3
UBR4-201ENST00000375218 RBM3P98179 157 aaKnown RBP6.9□□□□□ -1.3
UBR4-201ENST00000375218 TMEM91Q6ZNR0 172 aa6.9□□□□□ -1.3
UBR4-201ENST00000375218 Q6ZSV7 163 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms